Astyanax mexicanus (Mexican tetra): 103024483
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Entry
103024483 CDS
T05042
Name
(RefSeq) guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103024483
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
HCMV_UL139
RapH_N
Motif
Other DBs
NCBI-GeneID:
103024483
NCBI-ProteinID:
XP_049341129
Ensembl:
ENSAMXG00000042021
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All DBs
Position
11:49401444..49416537
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AA seq
629 aa
AA seq
DB search
MSGDPMVNPVCLVENVGSSFCVSDGAIRYLEQISQPVMVVSVVGLYRTGKSYLMNRLAGK
RTGFALGSTIESETKGIWMWCVPHPNKPDHTLVLLDTEGLGDVKKGDSKNDTWIFCLAVL
LSSTLVYNSRGTIDNIALEQLHFVTQLAEHIKVKSPTPAEGVENKEEEEEEDSQFVKFFP
NFIWAVRDFSLELTTREKGPIKEDEYLDNALQLKKGISQKISDYNVPRQCIRSYFPSRKC
FVFPMPATPESMSKLENLGEANLHPGFLEVSQRFCDHVFTESRVKTLKGGHRVTGRMFSH
LVRLYVETISSGNMPCLENAVVTLAQIENQAAVQEGLKVYQSGMAQVRSSFPVSADDILD
EHQKWSQMATTEFMKRSFQDQEGKYISLLTEKVDEHYSELLGENASSSEQRCWQLLSKLS
KDLNDGRQKGEYTKPGGYAIYCSHRDSVISQYQSQPGKGVKAEDVLEAFLSETNVEANFI
LQADNSLKEKDKEIQKQREKAALEEQQKKALEEKHKELQRAQQVEGKRHEERMQQMETKF
EEEKRLQVEELEKAMQRKLAEQEDLIKKNYYEKAELMRQEIDQLKDEIGNNSQSFFQQTV
LPLIDTGVDVFSKILHFKLMKSVLKSSPV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagatccgatggtgaatccagtgtgtttggtggagaatgtggggagctcattc
tgtgtgagtgacggtgccattcggtacctggagcagatcagccagccggtgatggtggtc
tctgtggtgggtctgtaccgcaccggcaagtcttacctcatgaaccgcctggcaggtaaa
cgaacaggttttgctctgggcagcaccatcgagtccgagactaagggtatctggatgtgg
tgtgtaccacaccccaataaaccagatcacactctggtgctgctggacactgagggactg
ggggacgtgaagaagggagattctaagaacgacacctggatcttctgcctggcggttctt
ctcagcagcactctggtctacaacagccgaggaaccatcgacaacattgcactggaacaa
ctgcacttcgtcactcagctggcagagcacattaaagtcaagtcacccactccagcagaa
ggtgttgaaaataaggaggaggaggaggaggaagactctcagtttgtgaagtttttccca
aacttcatctgggcggtgcgagactttagtctggagctgacgacgagggaaaagggacca
atcaaggaggatgagtacctggataacgctcttcagctgaagaaaggaatcagccagaag
ataagtgattacaatgttccgcggcagtgcatccgaagctacttcccatcgcggaagtgc
tttgtgttcccgatgccggccaccccagaaagcatgtctaagctagagaacctgggcgag
gctaaccttcaccccgggtttctggaggtctcccagcgcttctgtgatcatgtttttact
gaaagcagagtaaaaacgcttaaaggaggacaccgagtcacgggaaggatgttcagtcat
ctagtgaggctgtatgtggagaccattagcagtgggaatatgccgtgtttggagaacgct
gtggtcactctggcccagatagagaaccaggcagccgtgcaggaggggcttaaagtgtac
cagagtgggatggcacaggtgaggagctcgtttcctgtcagtgcagatgatattttggat
gaacaccagaagtggagccaaatggcaaccactgagttcatgaagcgctccttccaagac
caagaaggaaaatacatcagcttactcacagagaaagtagatgaacactactcagagctt
cttggagagaacgcgtcgagctcagagcaaaggtgctggcagcttctgtccaaactgtcc
aaagatctgaatgatggtcggcagaagggggaatacaccaagcctggaggatatgctatt
tactgctcacaccgagacagcgtcatctcccagtaccaatcacagcccggcaagggggtc
aaggctgaggatgtgctggaggcgtttctgagtgaaacaaatgtggaagcaaacttcatt
ctccaggccgacaacagtttaaaggaaaaagacaaagaaattcagaagcaaagagagaag
gcagctctggaggagcagcagaagaaagcgttagaggaaaagcataaggagcttcagcga
gctcagcaggtggagggaaagcgccacgaggagcgaatgcagcagatggagacgaagttt
gaggaggagaagcgtctgcaggtggaggagctggaaaaagctatgcagagaaaactggcg
gaacaggaagatctcatcaagaaaaactactatgagaaggcggagctgatgagacaggag
atcgaccagcttaaagacgaaatcggaaataattcacagagcttcttccagcaaacagta
ctgcctttgatcgatactggagtagatgttttctccaagatcctccactttaaactcatg
aaatcagtactgaaaagttctccagtttag
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