Astyanax mexicanus (Mexican tetra): 103024511
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Entry
103024511 CDS
T05042
Name
(RefSeq) transcription factor HES-1-like
KO
K06054
hairy and enhancer of split 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03460
Fanconi anemia pathway
amex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103024511
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103024511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024511
03400 DNA repair and recombination proteins [BR:
amex03400
]
103024511
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
103024511
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
103024511
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
INTS7_C_plants
Motif
Other DBs
NCBI-GeneID:
103024511
NCBI-ProteinID:
XP_007240960
UniProt:
A0A8T2LRC1
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Position
8:complement(223341..225414)
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AA seq
202 aa
AA seq
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MPGHAPQRISACATSKTASSEHRKPSKPIMEKRRRARINRSLVQLKALILHALHADVSRH
SKLEKAEILEMTVTHLRSVQRAQAAVSLSVQQRALGRYSAGFSACMTEVTRFMSTCEGVS
RELRTHLLAHLARCVTMTPPPQHVLHISQLGDAPPKTRPFFSAPGTSSLCSGNFRPVDRG
RPSTLTGPTIPEPSGTGVWRPW
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggcacgcgccccaacggatcagcgcatgcgccacatcaaagacagcgagctcc
gagcacaggaagccctctaaaccaatcatggagaagcggcggcgcgcgcgcatcaaccgc
agcctcgtgcagctgaaggcgctgatcctacacgcgctgcacgcggacgtctcgcgccac
tctaaactggagaaggcggagattctggagatgaccgtgactcacctgaggagcgtgcag
cgcgcgcaggcggcagtgtccctctccgtgcagcagcgagcgttgggcaggtacagtgcc
gggttcagcgcctgcatgaccgaggtcactcgctttatgtccacctgtgaaggagtgagt
cgtgagctccggactcacctgctagcgcacctggccaggtgtgtgacaatgactccgccc
ccacaacacgtactgcatatctcacagctgggcgacgcccctccaaaaacacgaccgttc
ttctcggcgccgggaacgtcgtcactgtgcagcggaaacttccgacccgtagatcgcgga
cgcccatccacattaaccggcccaacgataccagaaccttccggaaccggcgtgtggagg
ccgtggtga
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