Astyanax mexicanus (Mexican tetra): 103024576
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Entry
103024576 CDS
T05042
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103024576 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103024576 (spopla)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
103024576 (spopla)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
103024576
NCBI-ProteinID:
XP_007234902
Ensembl:
ENSAMXG00000006769
UniProt:
A0A8B9KH98
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Position
11:45787339..45808627
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AA seq
392 aa
AA seq
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MSGVPTPPPPGEMGSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSSFCSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLFVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDIDADVFKEMMGFIYTGKAPNLENMADSLLAAADKYALERLKVMCEEALCNGLSVE
NVADTLILADLHGAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETPGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKKLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagtccccacccctcctcccccgggggagatgggcagcggcccggtggctgag
agctggtgctacacccaggtgaaagtagtgaagttttcctatatgtggaccatcaacaac
ttcagcttctgtcgagaggagatgggggaagttctgaaaagctcatctttctgttcaggt
cccaacgataagatgaaatggtgtctgagagtcaatccaaagggactagatgatgaaagt
aaggattacctgtcactgtatttgctgctggttagctgtccaaaaagtgaagtccgagcc
aagttcaagttttctttactgaacgctaagcgtgaggagactaaagctatggaaagccaa
agagcctaccggttcgtccaaggcaaagactggggcttcaagaagtttattagaagagat
tttctgctggatgaagcgaacgggctgcttcctgatgataaactgactctgttctgtgag
gtgagcgtggtgcaggattcagtgaatatctcaggccagtccaacatgaacatgctgaag
gttcctgagtgccagctgtcggatgacctggggaacctgtgggagtgttctcggtttaca
gactgctcactgttcgtgggaggccaggagttcaaggcccacaaatccatcctggcagcg
agatcgccggtctttaatgccatgttcgagcatgaaatggaggaaagtaaaaagaaccgg
gtagacatcagtgacatcgacgcagacgtcttcaaagagatgatgggttttatatacaca
gggaaggcaccaaacctggagaacatggctgacagtttattggcagcagctgataaatat
gctctagagaggttaaaggtcatgtgtgaggaagctctgtgcaacggtctatcagtagag
aacgtcgctgacacgctcatcctcgcagacctgcatggagccgagcagctcaaagctcag
gccatcgatttcatcaacaggtgcagcgtcctccgacagctgggctgcaaggatgggaag
aactggaatagcaatcatgccaccgatataatggagactccgggctggaagtcaatgatc
cagtctcatcctcacttagtggccgaggctttccgcgcgctcgcttcggcccagtgcccg
cccttcggtctgcccaggaagaagctgaaacagtcctga
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