Astyanax mexicanus (Mexican tetra): 103024609
Help
Entry
103024609 CDS
T05042
Symbol
abca4a
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4a isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103024609 (abca4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103024609 (abca4a)
Transporters [BR:
amex02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103024609 (abca4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_23
COX8
Motif
Other DBs
NCBI-GeneID:
103024609
NCBI-ProteinID:
XP_022522357
Ensembl:
ENSAMXG00000016686
LinkDB
All DBs
Position
6
Genome browser
AA seq
2334 aa
AA seq
DB search
MGTISQVRLLLWKNWTVRKRQKMRFFMEIMWPVMLFIGLVWLRKANPLYRQHECHFPNKA
MPSAGVLPWIQGIFCNANNPCFQHPTRGESPGLVSNYNNSILIRFWSDAQELLLNDPEFL
HLGRVWRELSSMTKFIRAIRTHPEWIAGLGVTVEDILKDDEMLTSYLLRDVPLSESVVHQ
LVKAKIRPEQFVYGTPDLRLRDISCSQSLLERFLIFPSRHGVYAVHSALCPLKPSQLESI
EEKFYADVDMFKLLPMLPRLLDEYSSGIDLHFWARALSALSGKLRLLSQRSSFRELVQVL
QPLFQSPGNPSFSHLMAAASSLVCGYTEGAFSRVTSFNWYEDNNYKAFLGINNSRAQAQH
TYDSSTTAFCNDVMKDLESSPATRLMWNTLKPFLMGKILYAPDSPAIRQLIKNANSTFEE
LERLRNIIRSWEEVGPQLWDFFQSNIQLDVLRDILRNPSVMDYMDRGLKNTGLTIRHILN
FLHTGSEEERERDMVQFDWRNIFNLTDRTLRMINQYGECLVLDKFVGLPDETQLTQKALD
LIAEKKFWAGLVFVDTFSWTTKIPPHVKFKIRMDIDTVERTNKIKDRYWDPGPRADPMDD
LRYVWGGFAYLQDMVEHAVIKTHTGKEWPLGVYLQQMPYPCYVDDLFMLTLSRCFPIFIV
LAWVYSVSMMVKSVVLEKEMRLKETLKAMGVTNEVLWCAWFIDSFLVMAASTALLTAIIM
GGKVLNYSNPIILFIFLLTFTTATIMQCFLMTVFFNKANLAAACSGILYFSFYLPHLACF
TWQDRITKDMKIMASLMSQVAFGFGTEYLSRYEEQGLGLQWDNIHTSPLEGDEFSFHTSI
IMMLLDTVLYAVLAWYLDSVFPGQYGIGRPFYFPIQPSYWLNLTNPTKAVPEKSVVKRPS
IDNSAQKPEETANNQTQPVEEQTTQPSEPPGTCKHGDRREKLGMQIKLEEEGSSYQNQSY
LSGEKVFFEAEPSGLVVGVHVENLVKVFSGSSKPAVDGLSITFYEGQITAFLGHNGAGKT
TTMSILTGLFPPTSGTAFIYGKDIRTDMDTIRHSLGMCPQHNIIFHHMTVAEHILFYSLL
KGRPLAEAQQEVENMLEDFGLPHKRNEQTQNLSGGLQRKLSVAMAFVGGAKVVFLDEPTS
GVDPYSRRSIWDLLLKYRPGRTVILSTHHMDEADLLSDRVAIISQGRLHCCGSPLFLKSM
LGAGFYLTLVRRMKDDTPPTRKEGQCDCKDDCSCKCSICTEYKESTCGQTKSTGRQMDGD
VETITNLVHHHVPEARLVEAVGQELTFLLPSRGFKHRAYASLFRELEETLADIGLSSFGV
SDTSLEEIFLKVTADGETSLGKSAADLRALQETSRSSVFRDTTVTVNTEEPEDKKACANG
QPTAGGSSSGEGQGSRQVKGVSLVVKQFLALLIKRFHHTTRSGKDFFAQIVLPASFVLVS
LMFTLIVPPFGEYPSLTLSPWIYGRQFTFFSNEQSEMEGMKYFADVLLNRPGFGTRCMVD
EPLEEYPCNNITTEWEKPLVNPALVDVLNKSQWTELRPSPDCQCSTPTKLTMLPVCPEGA
GGLPLPQRIQSTGDVLIDLTGRNISDYLVKTYPTLIRTSLKSKYWVNEQRYGGISVGGRL
PVVGLSPKTIQDTAEQLGGIFNITAGKHVKRALRDTGTFLRYMETEYNVKVWYNNKGWHA
MPAFLNVANNAILRAHLPTNANPSEYGVTVINHPLNLTKEQLSEVNVLTTSVDAVVAMCV
IFAMSFVPASFVLYLIQERVTQAKHLQFVSGVSPLVYWTANFLWDMISYSVSAALVVQIF
INFDKKCYTSPANLHALIALLMLYGWSVTPMMYPMSYVFSVPSTAYVSLSCLNLFIGINS
SAITFILDLFDSSTTLYMFNQVLKRVLLIFPHFCLGRGLIDMAINQAVMDVYAQFGEDYS
LDPFSWNFVGKNVVCMAAEGFIYFILNILIQYRFFLEHWMPDSKKPLIVDEDLDVAKERD
RIYRGGSSSDILHIRDLSKTYSGGTKPAVDRICVGVSPGECFGLLGVNGAGKTTTFKMLT
GDIDVSSGEAAITGYSILTNILDVYHNMGYCPQFDAIDDLLTGREHLHLYARLRGVPESE
ISRVAEWGIQKLGLSQYAGYGAGTYSGGNKRKLSTAIAMIGCPALVLLDEPTTGMDPHSR
RFLWKSIMSVIQDGRAVVLTSHSMEECEALCTRLAIMVNGIFKCLGTIQHLKYKFGDGYV
VTMKIRSAKAGTVPDLNPAEAFMENTFPGCVQREKHYNTLQYEVASSSLARIFQLVLTNK
EKLNIEDYSVTQTTLDQVFVNFAKQQSGEEDAIVLHPRAAGARWNRVMPEKASV
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgatcagtcaggtgcggctcctgctatggaaaaactggacggtccgaaagagg
cagaagatgcggttcttcatggagatcatgtggccggtcatgctgttcatcggactcgtc
tggttaagaaaagctaatccactctaccgtcaacatgaatgtcatttcccaaataaagcc
atgccctctgctggagtcctcccatggatccaggggatcttctgcaacgccaacaacccc
tgcttccagcacccgactcgcggagagtctcccggccttgtgtccaactacaacaactcc
atactgattcggttttggtcagacgcacaggagcttcttctgaatgatccagagttcctg
catttgggcagagtgtggagagagctgtcctccatgactaaattcatcagagcgatccgt
acacatcctgaatggatcgcaggtttgggggtcacggtggaggacatactgaaggacgat
gagatgctcacctcatatcttctgcgagacgttcctctctcagagtccgtcgtccatcag
ctggtcaaagccaagatcagaccggagcagtttgtgtacggaactccagacctcagactg
agggatatctcctgcagtcagagtctcctggaacgattcctgatcttcccgagccgtcac
ggtgtctacgccgtccacagcgccctgtgtcccctcaaaccatcacagctagagagcatt
gaggagaagttttatgctgatgttgacatgttcaaactgctgcccatgctcccgcgtctc
ctggatgaatactccagcggcattgacctgcacttctgggctcgtgctctgtctgcgctc
tccggaaagctccggctgttatctcagaggagcagcttcagagagctggttcaggtgctc
cagcctctgttccagtctccaggaaacccttccttcagtcacctcatggccgcggcctcc
agtctggtctgtgggtacactgagggagcgttctccagggtgacgtccttcaactggtac
gaagacaacaactacaaggccttcctggggatcaacaacagccgagctcaggctcagcac
acctacgactcctccaccactgcattctgtaatgatgttatgaaggatttggagtccagt
ccggctacgagactaatgtggaatacgctgaagccgtttctgatggggaagatcctgtat
gctcctgattcacccgccatccggcagctcatcaaaaacgccaactccacgtttgaggag
ctggagagactgaggaacatcatcaggtcatgggaggaggtgggaccacagctgtgggat
ttcttccagagcaacatccaattggacgttctgcgggacatcttgaggaacccgtctgtg
atggactatatggaccggggattgaagaacactggtctgaccatcagacacatccttaac
ttccttcacaccggctcagaggaggagcgggaaagagatatggtgcagttcgactggagg
aacatcttcaacctgactgacagaacactgcggatgatcaaccagtatggagagtgtctg
gtattagataagttcgtgggtctgccggatgagactcagctgacccaaaaggctctagat
ctcattgctgagaagaagttttgggccggcctggtgtttgtggacacgttctcctggacc
accaaaatccccccacacgtcaagttcaagatccgcatggacattgataccgtggagcgt
accaacaagatcaaagacaggtactgggaccctggacctcgagccgaccccatggatgac
ctccgctacgtgtggggaggatttgcgtacctgcaggatatggtggagcatgcagtgatc
aagacccacacagggaaagagtggcctctaggggtgtatctccagcagatgccttaccca
tgctacgtggatgacctgttcatgctgacgttgagccgctgcttccccatcttcatcgtg
ctggcctgggtgtactcggtctctatgatggtgaagagcgtagtgctggagaaggagatg
aggctgaaggagacgctgaaggccatgggtgtcactaacgaggttctgtggtgcgcctgg
ttcatcgacagcttcctcgtgatggctgccagcactgctttactcactgccatcatcatg
ggagggaaggtgctgaactacagcaatcccatcatcctcttcatcttcctcctcaccttc
accacggccaccattatgcagtgcttcctgatgaccgtgttcttcaacaaggccaacctg
gcagcggcctgcagcgggattctctacttcagcttctacctgcctcacctggcctgcttc
acctggcaggaccgcatcaccaaggacatgaagataatggcgagtctgatgtctcaggtg
gcgttcggatttgggacggagtacctgtcccggtatgaagaacagggcctggggttacag
tgggacaacattcacaccagtcctctagagggcgacgagttttccttccacacctccatc
atcatgatgctgctggacactgtgctgtacgctgttctggcctggtatctggatagtgtt
ttcccagggcagtacggcatcggcaggcctttttactttcccattcagccgtcctattgg
ctgaacctcaccaatccaacaaaagcagttcctgagaaatctgtggttaaaagaccatcg
atcgacaactcagcccagaaacctgaagaaactgctaataaccagacgcagccagtggag
gagcagaccacccaaccttcagaaccaccaggaacctgcaaacatggagacagacgggag
aaactggggatgcagataaagctagaggaggaagggtccagttaccagaaccagagctat
ctgtctggagagaaggtgttcttcgaggcagagccgagcgggctagtggtgggggttcat
gtggagaacctggttaaagtgtttagcggaagctccaaacccgcagtggacggacttagc
attaccttctacgaaggccagatcaccgctttcctcggccataatggagcagggaagacc
accaccatgtctattcttactggattgttccctcccacctcggggacggccttcatctac
ggcaaggacatccgcacggacatggacaccatccgccactcactgggcatgtgtcctcag
cacaacatcatcttccaccatatgacggtggctgagcacatcctgttctactcgctgctg
aagggccggccgctggcagaggctcagcaggaggtggagaacatgctggaggacttcggg
ttaccacacaagaggaacgagcagacccagaacctctcaggggggctgcagaggaagttg
tctgttgctatggcgtttgtgggaggagctaaagtggttttcctggatgagccgacatca
ggagtggacccgtactccagacgttccatctgggatcttctgctgaagtaccgcccaggt
agaacggtgatcctctccacgcaccacatggacgaggctgatctgctgagtgatcgagtg
gctataatctctcagggccggctgcactgctgcggctccccgctgttcctgaagagcatg
ctgggagctgggttctacctcacgctggtccgtcgcatgaaggacgacacgccgcccacc
aggaaggagggccagtgtgattgtaaggatgattgttcctgtaaatgctccatctgcaca
gagtataaagagagcacgtgcggccagaccaaatccaccggtcgacagatggacggggat
gtggagaccatcacaaacctggtgcaccaccatgtgcccgaggccaggctggtggaggct
gtggggcaggagctgacctttctgttgcccagccggggctttaaacaccgagcttacgcc
agtctgttcagggaactggaggaaaccctggcggatatcggcctcagcagcttcggagta
tcagacacctcactggaggagatctttctgaaagtcacagctgatggtgaaacatctctt
gggaaatcagcagctgatttgagagcgttgcaggagacatctcgctccagtgtctttcgg
gacaccacagtgaccgtgaacactgaggaaccagaagataagaaggcctgtgctaatggt
cagcccacggccggagggtcctccagtggagagggacagggatcccggcaggtgaaaggt
gtgtctctggtggtgaaacagttcctggctctgctgattaagcgatttcaccacacaact
cgttctggcaaggatttcttcgctcagattgtgcttcctgccagttttgttctggtgtct
ctgatgttcaccctcatcgttcctccgtttggagagtatcccagcctgactctgagcccc
tggatatacggccgacagttcaccttcttcagtaatgagcagtcagaaatggagggtatg
aagtatttcgctgatgtgcttttaaacagacctggatttgggacacgctgcatggtggat
gagcctctagaggaatacccgtgcaacaacatcaccacagagtgggagaaacctctagta
aacccagcgctggtcgacgtgctgaataaatcacagtggacggagctccggccgtctcca
gactgtcagtgcagcacccccaccaaactcaccatgctgcccgtctgccctgagggagcg
ggggggctgccccttccacagagaatccagtctactggagatgttctgatagatctgact
ggcaggaacatctcggactatttggtgaagacctacccgaccctgatcagaaccagtttg
aagagtaaatactgggtgaatgaacagaggtatggagggatttctgtaggcgggcggctg
cctgtggtgggattgagccccaaaaccattcaagacacggcagagcaattaggaggaata
tttaatataacagcgggaaaacacgtgaaacgtgctctgagggacactggcacatttctg
agatatatggaaacagaatataatgtgaaggtgtggtacaataataaaggctggcacgcc
atgccggccttcctgaacgtggccaacaatgccatcctgagggcgcacctccccaccaat
gccaaccccagcgaatacggcgtcaccgtaatcaatcacccgctcaacctcactaaagag
cagctctccgaggtcaacgttctgaccacctcagtggacgcggtggtggccatgtgtgtg
atcttcgccatgtccttcgttccggccagtttcgtcctctacctgatccaggagagagtc
actcaggccaaacacctgcagtttgtgagtggagtcagtccactggtctactggaccgcc
aacttcctgtgggacatgatcagctactccgtcagtgccgcactggtcgtgcagattttt
atcaactttgataagaagtgctacacctcccccgcgaacctgcacgcgctaatcgcgctg
ctgatgctgtacggctggtccgtgacgcccatgatgtatcccatgtcttacgtcttcagc
gtccccagcacggcctacgtgtccctgtcctgcctcaatctgttcatcgggatcaacagc
agcgccatcaccttcatcctggacctgttcgacagcagcactactttgtatatgtttaat
caggtgctgaagagagtccttctcatctttcctcacttctgtctgggcagaggactcatc
gacatggccataaaccaggctgtgatggacgtttatgcacaatttggagaggattacagt
ctggatcccttcagctggaactttgtggggaagaacgtggtgtgcatggctgcagaggga
ttcatctacttcatcctcaacatcctcatccagtacaggttcttcctggagcactggatg
ccggacagtaagaagccgctgatagtggacgaggatctggacgtggctaaagagagggac
aggatctacagaggaggaagcagcagtgatatcctgcacatcagagacctgtctaaaacg
tactctggggggacgaagcctgcggtggacaggatctgtgtgggagtgtctccaggagag
tgctttgggcttctgggagtaaacggcgctgggaaaacaaccaccttcaaaatgctcact
ggggacatcgacgtgagctcgggcgaggcagccatcacgggttatagcatcctgacaaat
atcctggatgtgtatcacaacatgggttactgcccccagtttgatgccatagatgatcta
ctgactggcagagaacatcttcatctctatgcacgactcagaggagtcccggagtctgag
atcagcagggtggctgagtgggggattcagaagctgggtctgtctcagtacgcaggttat
ggtgcaggaacctacagcgggggaaacaaacgcaagctttccactgcaatcgccatgatc
ggctgccctgctctcgtactgctggacgaaccgaccactgggatggacccccactcccga
cgcttcctgtggaagtctataatgagtgtgattcaggacgggagggctgtggttctcaca
tctcacagtatggaagaatgcgaggctctctgtacacgtttggccatcatggtgaacggg
atcttcaagtgtctgggcaccattcagcacctcaaatacaaatttggtgatgggtacgtg
gtcactatgaagatcaggtcagctaaagcgggcacagtgccggatctgaacccggccgag
gccttcatggagaacacgtttccgggctgtgttcagagagagaaacactacaacaccctg
cagtacgaagtagcgtcgtcctccctcgcccgcatcttccagctcgtcctcaccaacaag
gagaagctcaacatcgaggattactccgttacacagaccacactcgaccaggtatttgtg
aactttgctaagcagcagtctggagaggaagacgcgatagtgcttcaccccagagctgca
ggagccagatggaaccgagtcatgcctgagaaagcgtccgtctga
DBGET
integrated database retrieval system
