Astyanax mexicanus (Mexican tetra): 103024666
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Entry
103024666 CDS
T05042
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03460
Fanconi anemia pathway
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103024666 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
103024666 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103024666 (fancl)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103024666 (fancl)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103024666 (fancl)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103024666 (fancl)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
103024666 (fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
Tymo_45kd_70kd
zf-HC5HC2H
PHD_NSD
zf-rbx1
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
103024666
NCBI-ProteinID:
XP_049337384
Ensembl:
ENSAMXG00000030243
UniProt:
A0A3B1IWZ4
LinkDB
All DBs
Position
7:complement(36633304..36665075)
Genome browser
AA seq
371 aa
AA seq
DB search
MADNLLKESPLLVALDKNRTVYDGFISVQEKDFRLRISLPPDHQLKRAKLHCCWQLKQLL
KNYQDIVKQRLHHSSDLVSFILELRTILELALKSQPGWQSIPPPQYYSQLITEIEDLGWD
KLLFIDTNFQSLQLKAEDSSGRQHSITVKLKSKYPGEAPECSADLPVPLVITWTSQSTLA
HIHSQFLLIVEALAEFWAVLDEIDEHTWVLEPEKPTRADSMRRIAIGNNVSIKLEIDPRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSVLQNMKDVMEIEFPSPATHEKSSFS
VECGICYAYRLDSAIPDQVCNDPRCGQPFHQACLYEWLRGLPTSRQSFNLVFGECPYCSK
PITVKMDVQKS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacttgcttaaggagagtcctttattagttgcacttgataagaacaggact
gtttacgacggattcatctcagtacaggagaaagacttcagattgagaatatctctgccc
ccagaccatcagctgaaacgggcaaaattgcactgttgctggcaactaaaacagctactg
aaaaattatcaagatatcgtaaaacagaggttgcatcattcttcagatttggtcagtttt
attttggagctgaggacaatactggaattggctttgaagagccagccaggatggcagtcc
atcccaccacctcagtactattcacagctcatcacagaaatagaggatctaggatgggat
aagctgctcttcatcgatacaaatttccaaagtcttcagctgaaggcagaggactcttct
ggtcgacaacattctattacagtcaagcttaagtccaagtacccaggtgaagctccagaa
tgctctgcagacctcccagtcccactggtcattacatggacctcccagagcactctagct
cacatccatagccagttcctgctgattgtggaagctttggctgagttctgggcagtgctg
gacgagattgatgagcacacttgggtgttggaacctgaaaaacccaccagagctgactcc
atgaggagaatcgccattggaaacaacgtctccataaagctcgagattgatcccagacat
cccaagatgttgccagagtgctgcctgctgggagctgagcacgtggtcacccccctgagg
aataagctgaatgctaacatgcatttatggaaccctgactgcagtgtcctacagaatatg
aaggatgttatggagatagaattcccgtcgcctgccacccacgaaaaatctagcttcagt
gtggagtgcggcatctgctatgcttatcgtctcgattcggccatcccagatcaagtctgc
aatgacccacgctgcgggcagccatttcatcaggcctgtctctatgagtggctgagaggt
ttgcccaccagtcgtcagagctttaatcttgtgtttggtgaatgtccctactgcagtaag
cccattaccgtgaaaatggatgttcaaaaatcataa
DBGET
integrated database retrieval system
