Astyanax mexicanus (Mexican tetra): 103024671
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Entry
103024671 CDS
T05042
Symbol
zer1
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103024671 (zer1)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
103024671 (zer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
Arm
LRR_8
HEAT_EZ
LRR_4
Motif
Other DBs
NCBI-GeneID:
103024671
NCBI-ProteinID:
XP_022532335
Ensembl:
ENSAMXG00000016425
LinkDB
All DBs
Position
17:45558989..45577396
Genome browser
AA seq
773 aa
AA seq
DB search
MAAKAGDNPDSLMSLCTVFCLKNLRRTMCYTGERNKLCLRPDVFLPSEICDKLVNVYMDL
VYTDSNFEAQDGFFQLFSDPRSTRLTRLQLRDLVRDKDVEAIKKQDLIELHLTSCDHLSA
RSLYTLCSFRHSLVSLSLFGCSHIFFRKGVAPLACGEDYGDEDEEERMPRHAVDSEFTFQ
GFNRLRLLNLGGMQAVVDIEALLKPLPALTSLDLSGVYLPRPAFLAQWRDRLASLVLYNV
DLSEELISTVVQMSRLRHLDISRENQRNSKFKMTRKILTSIVQSLGNLVSLDISGHIMLD
NCTVPQFEDAMGRPSIEPSKSSIYPFQELKRPLQFLGLYNTTLCNVTHIPAYKVTGSKNE
EQVLNAIEAYTESRPELAHRAINQLFDIARIQHCSQLLRALQLVIAALKCHKYDKSIQVT
GSAALFYLTNTEYRNEQSVRLRRQVIEVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELEF
QYHRVNLLLLKILEPARQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVKTMLNLIQK
KLQDRMCDQVMEFSWSALWNITDETPDNCQMFLNCNGMDLFLDCLQEFPDKQELHRNMLG
LLGNVAEVRALRPQLLTSQFITVFSNLLDSKADGIEVSYNACGVLSHIMFDGPDVWSVED
PERDWVMDKMWDAIQSWDVTSRRNINYRSFEPILRLLPQGISPVSQHWATWALFNLVSVY
PSKYCPLLVKEGGVALLEKVLELDSSQPETKDMARKVMEQCENFKEDPMETSR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaaggctggagacaacccggacagcctgatgtctctgtgcacagtgttctgt
ttaaagaacctcagaagaaccatgtgctacacgggagaacggaacaagctctgtctgcgc
ccggatgtgttcctgcccagtgaaatctgtgataagctggttaatgtgtatatggacctg
gtttatacagacagtaacttcgaggcacaggatggtttcttccagctgttctcagaccct
cgcagcaccaggctgacccgtcttcagctcagggatcttgtgcgggacaaagacgtggag
gccatcaagaaacaggacctgatagagctgcacctgacctcctgcgatcacttgagcgcc
cgcagcctgtacacactctgcagcttcagacacagcctggtgtccctcagcctcttcggc
tgctcacacatcttcttcaggaagggagtagcgccgctggcctgtggggaggactacggt
gacgaggacgaggaagagcgcatgcccaggcatgcagtggactctgagtttaccttccag
ggctttaacaggctgcggctgttgaatctgggaggtatgcaggcagtggtggatattgag
gctctgctgaagcccctgccggctcttacctctctggacctgtctggagtttatctgccc
cggccggcttttctcgcacagtggagggacagactggcctctctggtgctttataatgtc
gatctttcagaggagctcatcagcactgttgtgcagatgagccggttaaggcacttggat
atctctcgggagaaccagcgcaacagtaaattcaaaatgacaaggaaaatcctgacgagt
attgtgcagagcctggggaacctagtgtcactagatatttctggtcacataatgctggat
aactgcaccgtgccacaatttgaggacgccatgggacgccccagcatcgagccgtctaag
agcagtatctatcccttccaggagctcaagaggccactacagtttttgggcctgtataac
accacactctgcaatgtcacacacatccctgcctacaaggtgacaggctctaagaatgaa
gagcaggtgctgaatgctatagaagcttatactgaatcccgtcctgagctggcccacaga
gccatcaaccagctgtttgacatcgccaggatacaacactgcagccagctgctccgagca
ctacagctggtaatcgcagcactgaagtgtcataaatatgataagagcattcaagtgacg
ggcagcgctgctctcttctacctgaccaacacagaataccgcaacgagcaaagtgtacgg
ctgcgccggcaggtcatagaggtggtgctcaatggcatggagcaatatcaggaggtcacg
gtccagaggaactgctgtctgactctgtgtaacttcagtatacctgaagagttagagttt
cagtaccaccgggttaatctgctgctgctgaagattttggagccggcgcggcaggacgag
tctatccagcgcatcgccgtgcatctctgcaacgccctcgtctgccaggtggacaatgac
cacaaagaggccgtcggcaagatgggttttgttaagaccatgctgaatttaatacagaag
aagctacaggacagaatgtgtgatcaggtgatggagttttcgtggagcgctctgtggaac
atcacagacgagacgccagataactgtcagatgttcctcaactgcaacggcatggacctc
ttcctggactgcctgcaggagttcccagacaaacaggagctgcatcggaacatgctgggg
ctgctgggtaatgtggcagaggttagagcactcagacctcagctgctcaccagccagttc
atcaccgtcttcagtaatctgctggacagcaaggcggacgggatcgaggtgtcctataac
gcctgtggggttctgtcccacatcatgttcgacgggcctgacgtgtggagcgtggaggac
cctgaaagagattgggtcatggacaaaatgtgggacgccatccagagctgggacgtcacc
tcccgccggaatatcaactacaggtcgtttgagcccattctgcgtctccttcctcagggt
atatctccagtcagtcagcactgggccacctgggctctctttaacctggtgtctgtatat
ccaagcaagtactgtcctttattagtgaaggagggaggagttgctctgctggagaaagtt
ttagagctggattcttctcagccagagaccaaggacatggcacgtaaagtgatggagcag
tgtgagaactttaaggaagatcccatggagaccagcaggtaa
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