Astyanax mexicanus (Mexican tetra): 103024684
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Entry
103024684 CDS
T05042
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024684 (irx1a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103024684 (irx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
Tub_N
Pox_F17
Motif
Other DBs
NCBI-GeneID:
103024684
NCBI-ProteinID:
XP_007254591
Ensembl:
ENSAMXG00000012619
UniProt:
A0A8B9KY92
LinkDB
All DBs
Position
6:29108115..29113191
Genome browser
AA seq
450 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGAERAAVLAPSSRGGSGEAGAGAPVASVLGVYAHPYAHANY
GAFLPYASADLALFSQMGSQYELKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARPKNAT
RESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGA
RSKEDEEGNIFGSDNEGEHEKNEDEEEIDLESIDIDKIDENDEGEQSHDDEDEQVDKAER
KRRVLVFDQSKGARPELNNNNNDDNNNSSSSSSSSSNSTRVSSPGGQGSFQLQVGNKPKI
WSLAETATSPDSSRKPASPCGPTNQVSPQMQHPAFLSSHGLYTCQIGKFHNWTNGGFLGQ
NALLNVRSFLGVSQHHHNHHGQQQQQQHQVTALDEEKSPEDLSPKHIDRGIVLRNESPTQ
HTNSLKSSFRPLHDSPRRNPQEVSLSLSSA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggctacccgcagtacctgagtgcctcccaggccgtctacgga
gctgagagggcggccgtgcttgctccgtcctcccgtggagggagcggggaggcgggcgca
ggcgctcccgtggcctcggtactgggtgtctacgcgcacccgtacgcgcacgctaactac
ggagccttcctgccgtacgccagcgcggacctggctctcttctctcaaatggggtctcag
tatgaactaaaggacagtcctggtgtgcaccctgctagctttgctgcccatacatctcct
gccttttatccttatggccagtttcagtatggtgaccccgccaggcccaagaacgccaca
cgggagagtacaagcacgctgaaggcctggctgaatgagcacaggaagaacccctatccc
accaaaggtgagaagatcatgctggctatcatcaccaagatgaccctcacccaggtctcc
acgtggttcgccaatgccaggaggagactcaagaaggaaaacaaggttacatggggcgcc
aggagcaaagaggacgaggagggcaatatatttggcagcgacaatgagggggagcacgaa
aagaacgaagatgaagaggagatcgacctggagagcatagacatcgacaagatcgacgag
aatgatgagggggaacagagccatgacgatgaggatgagcaggtggacaaggccgagaga
aagaggagggttctagtctttgaccagtccaaaggagcgcgcccggagctaaacaataac
aacaatgatgacaacaacaacagcagtagcagcagcagtagtagcagtaatagcaccagg
gtatcctctcctggaggacagggcagtttccaacttcaagtaggcaacaaacccaaaatc
tggtctttagcagagactgccacgagtccggacagctctaggaagcctgcgtcaccgtgt
gggccaaccaatcaggtgtcaccccagatgcagcaccctgcctttctctccagccacgga
ctatacacgtgccagattgggaagtttcacaactggacaaacggagggttcctgggacag
aatgctctcctgaatgtcaggtcctttttaggggtcagtcagcaccatcacaaccaccac
ggtcagcagcagcagcagcagcaccaagtgactgcgctggacgaagaaaagagtccagag
gacctcagtccaaaacacatagatcgaggaatcgttcttcgaaacgaatcaccaacgcaa
cacaccaacagtttgaaatcatcgtttcgcccacttcatgacagccccaggaggaatccg
caggaagtctccctctcgctctcctctgcttga
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