Astyanax mexicanus (Mexican tetra): 103024874
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Entry
103024874 CDS
T05042
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024874 (pou6f1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103024874 (pou6f1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
103024874
NCBI-ProteinID:
XP_022532989
Ensembl:
ENSAMXG00000036922
LinkDB
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Position
13:complement(6048281..6069470)
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AA seq
610 aa
AA seq
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MDSEDLPAKDAPLTVNEQVIVMSGQETIRVLEVEVDATVPPSRVDVKVEAGAEDRGALTL
EPSEGVVQDIPAPHSSITTSVCTETAAPAVQTVTAPLSLSLPQTQAAMPITVQACPQVLT
QDGLATLMTGMMAQQGSLGQPLLIPLSMAGSVGGQGGLAVLTLPTATVATLPGLTAAGAA
GGLIKLPFAGLQAATVLNSVQSQLQAPAQTVLQPQAAALQSLQAAVQQATPVSTAQVAAA
TAAPVLQKVSEPSASVATLQTGGLTINPAIISTASLGAQPQFISSLTTTPIITSAMSNVA
GLTSQIITNAQGQVIGTLPLLVNPASLAGAAAAPAFSGQGLQVQTVSPQLLLNPQGQIIA
TIGNTPAAAAATTPTTSTVLSKAPGPLTHKTTAQGPVVTVAQSPLVITPQPSAGKIVSSI
SSAVPIACAEMPTVGQLVSKPQSGVSEEEGINLEEIREFAKNFKIRRLSLGLTQTQVGQA
LTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLERWLAEAELWNQKGQQNLMEFVGGEP
SKKRKRRTSFTPQAIEVLNTYFEKNALPTGQEITEIAKELNYDREVVRVWFCNRRQTLKN
TSKINVFQVQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggactctgaggacctcccagcaaaggacgctccactcactgttaatgagcaggttatc
gtcatgtctggtcaggagaccatccgtgtgctggaagtggaagtggacgctacggtgccg
ccctcccgggtggatgtgaaggttgaggctggagcagaggaccggggagctctgacttta
gagccgtctgagggagtagtgcaggacatcccagcaccacattccagcatcacgacctct
gtttgcactgagacagcagcccctgcagttcagactgttacagcccctctcagcctctcc
ctgccccagacccaggccgccatgcccatcactgtccaggcctgcccacaggttctgacc
caggatggcttggctactctgatgactggtatgatggcgcagcagggatcactaggccag
cccctgttgatccccctcagtatggcggggtcagtgggaggccagggtggcctggctgtg
ctcaccttgccaacggctactgtggcaactctgcctggtcttactgcagcaggtgcagct
ggtggacttatcaagctgccttttgctgggctgcaagctgctactgttctgaactcggtc
cagtctcagctccaggctccagcgcagacggttctgcagccacaagcagctgcgcttcag
tcactgcaagcagctgtgcagcaggccaccccagtaagcactgcgcaggtggctgctgct
actgcggctccagttctgcagaaggtttccgagcccagtgcctctgtcgcaacactccag
accgggggtctcaccatcaaccctgctattatcagcaccgcctcactgggtgcccagccg
cagttcatcagctctctgactacaactcccatcatcactagcgccatgtccaatgtggca
ggactcaccagccagatcatcactaatgcacagggacaggtgattggcacattgcctctg
ctggtgaaccctgcgtctttagctggagcggctgcagcgcctgcattttccggtcagggt
cttcaggtccaaacagtgtcccctcagctgctgctgaacccacagggtcagatcatagcc
accattggaaacactccggctgcagctgctgctaccacccccaccacctccacagtgctg
tctaaagcccctggacctctgactcacaagacaaccgcacagggtcctgttgtgactgta
gcccagtctccgctggtgatcaccccacagccctcagccggtaaaatagtctcctccatc
tcctcagctgtgcctattgcctgtgcagagatgcctaccgtgggccagcttgttagcaag
ccacagtctggagtgagtgaagaagagggcattaacctggaggagatcagagagttcgcc
aagaactttaagatccgacggctctcgctgggactgacccaaacacaggtcggccaggct
ctcacagccactgaaggacctgcttacagccagtctgcaatctgcaggtttgaaaagctt
gacatcacgccgaagagtgctcagaagctgaagcctgttttggagcgttggctggccgag
gccgagctctggaatcagaaggggcagcagaacctgatggagtttgtcggcggggagcca
tccaagaaacgcaagcgccgcaccagcttcaccccgcaggccatcgaggttctgaacacc
tactttgagaaaaacgcccttcctaccggccaggagatcaccgaaatcgccaaggagctt
aattacgaccgggaggtggtgagagtgtggttctgtaaccgcagacagactctgaagaac
accagtaagatcaacgtgtttcaggtgcagtaa
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