Astyanax mexicanus (Mexican tetra): 103024890
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Entry
103024890 CDS
T05042
Symbol
tbc1d22a
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103024890 (tbc1d22a)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
103024890 (tbc1d22a)
Retrieval pathways
103024890 (tbc1d22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
VIR_N
CDC45
Motif
Other DBs
NCBI-GeneID:
103024890
NCBI-ProteinID:
XP_049329598
Ensembl:
ENSAMXG00000043290
LinkDB
All DBs
Position
2:complement(18269609..18530789)
Genome browser
AA seq
567 aa
AA seq
DB search
MSSDGGKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPPSTSTPGKPKKA
TTFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKLQERRQLQQDE
VFEPEEKEEEEGGHEEEEEEQEEEEEAAGTTAELSFSSERLPHSDSRLVKSHSEAPIGSP
KELVGERSALHRQQSLPHRPVIPLVARMADQNTSGTPAMTEREASRLDKFRQLLAGPNTD
LEELRKLSWSGIPRQVRPITWKLLSGYLPANAERRASTLQRKRQEYFGFIEQYYDSRNDE
HHQDTYRQIQIDIPRMSPEHLVLQPKVTEIHIDIPRTNPLIPLFQQASVQEIFERILFIW
AIRHPASGYVQGINDLVTPFFVVYVFEYIEEEVENFDVSSLQEEVLRNIEADSFWCMSKL
LDGIQDNYTFAQPGIQRKVKALEELVSRIDETVHRHMQQYEVEYLQFAFRWMNNLLMREL
PLRCTIRLWDTYQAEPEGFSHFHLYVCAAFLVRWRKEILEEKDFQGLMILLQNLPTMHWG
NEEVSVLLAEAYRLKFAFADAPNHYKR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgacggcgggaaaaagcagttctggaagagaaacacagcgaaagtgcctggc
agtatacaacatgtttatggagcccagcatcctccatttgacccgcttctgcatgctaat
ttgatcaaagctgggaacaagcccccctcgacgagcacgccaggcaagcccaagaaagcc
accaccttccaggagttcgagagcatcaccagcgatgcctgggacgtcggagacgacgac
gacgagctcctagccatggccgcccagaacctgaacatcgaggtggtgatggagacggcc
aacaaggtgatcgagaaccacagcaagctccaggagcgacgacagctgcagcaggacgag
gtgttcgagcctgaggagaaagaggaagaggagggggggcacgaggaggaggaagaggag
caggaggaagaggaggaggcggccgggacgacagcagagctttccttcagctcggagcgc
ctcccccacagcgacagcaggctggtgaagtcccacagtgaagcacccattggatctcca
aaggagttggttggagaacgttcagcactacacaggcaacagtcgctccctcaccggccg
gtcatcccgctggtggcccgcatggcggatcagaacacgtccggcactccagccatgacg
gagagagaggcgtccagactggacaagttcagacagctgctggccggacccaacactgat
ctggaggagctgaggaaattgagctggtctggaatcccacggcaagtgcgcccaatcacg
tggaagcttctttcaggctacctgcctgccaacgcagagcgcagagccagcacgttgcag
agaaagaggcaggagtacttcggcttcatagagcaatactacgactcccgcaatgacgag
catcaccaggacacctacagacagattcaaatagatattccgcggatgagtccggagcat
ttagtgctccagcccaaagtgaccgagattcacattgacataccgagaactaatcctctt
attcctctctttcaacaagcttctgtgcaagagatctttgagcgaattctcttcatctgg
gccatacggcatcccgccagcggctacgtgcagggcatcaacgaccttgtcactcccttc
ttcgttgtttatgtcttcgagtatattgaggaagaggtggaaaatttcgatgtttccagc
ctgcaggaggaggtgctgcggaacattgaggctgacagcttctggtgcatgagcaagctg
ctggacggcattcaggataactacaccttcgcccagccggggatccagcggaaagtcaag
gccctggaggagctggtcagccgcatcgacgagacggtgcatcgacacatgcagcagtat
gaggtggagtacctgcagttcgccttccgctggatgaacaacctgctgatgagggagctt
cctttacgctgcaccatccgactatgggacacctaccaggccgagcccgaaggcttctct
cacttccacctgtacgtgtgtgctgccttcctggtgcgctggaggaaggagattttggag
gagaaagacttccagggcctgatgatcctcctgcagaacctacccaccatgcactggggc
aacgaggaggtgagcgtgctgttggctgaggcctacaggctgaagttcgcctttgcagac
gcgcccaaccactacaagagatga
DBGET
integrated database retrieval system
