Astyanax mexicanus (Mexican tetra): 103024900
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Entry
103024900 CDS
T05042
Symbol
npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024900 (npas2)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103024900 (npas2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
RAP1
Motif
Other DBs
NCBI-GeneID:
103024900
NCBI-ProteinID:
XP_022536456
Ensembl:
ENSAMXG00000006915
LinkDB
All DBs
Position
1:34296026..34391369
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AA seq
874 aa
AA seq
DB search
MGEGVSMDNLSEFGGLCPSSRREWETSSCVDDLMDEDEKDRAKRASRNKSEKKRRDQFNV
LIKELCTMLQGQGHPRKMDKSTILQRTIDFLQKQKEITAQTESCEIRQDWKPSFLSNEEF
TQLMLEALDGFLIALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLPEREHAEVYKLL
STHLLMTDPINSDYLESNETHVEFCCHLMRGNIDPKEPPTYEYVKFVGDFKFHNSVPTSS
CNGYELVFPRTLQASLEEQVCLVATVRLVTPQFLKDLCNVEDPCDEFTSRHSLEWKFLFL
DHRASPIIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWI
WLQTHYYITYHQWNSKPEFIVCTHTVVSYAEVRAERRREYGLEETSAEIATTSVKGQEVY
LDMCAPMDASRDRISGARSASSHSSRKSSHTALSDSASNSSVRYKETCTSSRQSASIGPE
SSSRLSHSGSKSLIQRRASEPLPPSPSCTQPPVMASAQHQAVCGGFQQPQLGVMHQLKEQ
LEERTRILQADIKTQQQELHDIKEKLQLANLQMLLQQPIHSDFPSPSQQQQQQQQQQQQQ
SSGQSAQNSQSGVIRHNSSSHTHSHTHPKPQHCAPHAASSHTLLREQPSSSTTQQRLVRS
TPMQTVSVPVQTHTSLTMPLYSNPMMFSPNHGYRTVPDTHAHTHRHTEADNNPEGQLRML
LNQPVQTLVPDSSGAQVSQCSSTIQQTKYLDQQMMTPSFPVQQVNCNAVLVPSPVFTSPI
MIPHNSFITPRAPPAYTPHPQSTQHGLQIQQPQQFFQMQPQGLIHSGPTQAFFHTTNVPP
QSTVGYIQQQQPQQQQQPQHLHSQPPDYRNMLPR
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaggagtgagcatggacaacctttctgaatttggtgggctttgtccgtccagc
cggagggaatgggaaaccagcagctgtgtggacgacttgatggacgaagatgaaaaagac
agagctaaaagagcgtcccgtaataagtcggagaagaagcggagagaccagttcaatgtg
ctcattaaagagttgtgcaccatgctgcaggggcagggccacccccgcaaaatggacaaa
tccaccatcctccagaggaccatcgactttctgcagaaacagaaagagatcacagcgcag
acggagtcgtgtgagatccggcaggactggaagccttcgttcctcagcaatgaggaattt
acccagttaatgctggaggcattggatggtttcctaattgcacttaccactgatgggaac
atcatctatgtatccgacagcgtctcttctctgattggccatttaccatcagacatggtg
gaccaaaacatcctgaactttctgcccgagcgtgagcatgcggaggtctacaaactgctg
tccacgcacctgctaatgactgaccccatcaattctgactacctggagagcaatgagact
catgtggagttctgctgtcatttgatgaggggaaacattgatccgaaggagccgcccact
tatgagtatgtcaaattcgttggagatttcaagtttcacaacagtgtgcctacgtcgtct
tgtaacgggtatgagctggtctttccgcgtacgcttcaggcctctctggaggagcaggtg
tgtttggtggcaacggtcaggctggtcactccacagttcctcaaggacttgtgtaatgtg
gaagatccatgtgatgaatttacatcaagacacagtctggagtggaaattcctcttctta
gaccacagagcctctccaatcatcgggtacctgccgtttgaggttttagggacgtctgga
tatgattattatcacgtggatgatctggagctgatcgctcagtgccacaaacagctgatg
cagtgtgggaaggggaagtcgtgttattatcgtttcctaactaaaggccagcagtggatt
tggctgcagacacactactacatcacctaccaccagtggaactccaaaccagagttcatc
gtctgcacacacactgtggtcagttatgctgaggtcagggcagagagaaggagagagtat
ggactggaggaaacctctgctgaaatagccaccacttcagtaaagggtcaggaggtctat
ctggacatgtgtgctcctatggacgcgtcacgggacagaatcagtggagcacgctcagcc
tcttcacacagctcacgcaaatcgtctcacaccgcactgtctgattcagcatcaaactct
tctgtccgctataaagaaacctgcacatcgtcacgacagtctgcatctataggacccgag
agttccagcaggttatcacacagcggttcaaagagcctgattcagagacgagcctctgag
ccccttcccccttccccttcctgtactcagcccccagtaatggcttctgcgcagcaccag
gcagtgtgtggaggtttccagcagcctcagctgggagtgatgcaccagctgaaggagcag
ctggaggagagaacccgaatactgcaggctgacatcaaaacacagcagcaggagctgcat
gacattaaagagaaactacagcttgccaacctgcagatgttgctgcagcagccgatccac
agtgacttcccatccccgtctcaacagcagcagcagcagcagcaacagcagcagcagcag
tcttcaggccagtcagctcaaaacagccaatcaggagtcatccgccacaacagcagcagt
cacacacactctcacacacaccccaaaccccagcactgcgctccacatgcagcctcatca
cacacactgctccgagagcagcccagcagctccaccacacagcagaggctggttcggagc
actccgatgcagacggtcagtgttccggtgcagacacacaccagtctgaccatgcctctc
tacagcaaccctatgatgttctccccaaaccatggataccgcaccgtcccagacacacac
gctcacacacatcggcacactgaagcagacaacaaccctgaaggacagctacggatgctg
ttaaatcagccagtgcagactctggtcccggacagcagtggagctcaggtgtctcagtgt
agctccaccattcaacaaaccaaatatctggaccagcagatgatgaccccttcctttcca
gttcagcaggtcaactgcaacgctgtgctagtcccctctcctgtttttacttcaccaatt
atgatccctcataacagcttcataactcctagggctccacccgcctacacaccccaccct
cagagtacacagcacggcctccagatccagcagcctcagcagttctttcagatgcagcca
cagggtcttatccacagtggtcccactcaggccttcttccacaccaccaatgtcccgcca
caaagtactgtgggatacatacagcagcaacagcctcagcagcagcaacagccacagcac
cttcattcccagcctccagactacaggaacatgttgccacggtaa
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