Astyanax mexicanus (Mexican tetra): 103024987
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Entry
103024987 CDS
T05042
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103024987 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103024987 (grin2bb)
04082 Neuroactive ligand signaling
103024987 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103024987 (grin2bb)
Ion channels [BR:
amex04040
]
Ligand-gated channels
Glutamate (ionotropic)
103024987 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
103024987
NCBI-ProteinID:
XP_049325697
Ensembl:
ENSAMXG00000018685
LinkDB
All DBs
Position
21:complement(27400038..27605375)
Genome browser
AA seq
1776 aa
AA seq
DB search
MTVGLAMFKGLRLHSSAMLVSLRFSLLLLSLLLLLFPACESRRGGGGGATGGGGGAGGVS
SSTRGHSIIGPPHYPPAPASPVAAPQPPKFAQGLSIAVILVGNSSEVTLAEGVEKEDFLH
VPLPPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDDTDQEAIAQILDFISAQTHI
PILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQD
FVNRIRSTIENSFVGWELEEVILLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEAATIF
EVAHSVGLTGYGYTWIVPALVAGDADNVPNVFPTGLISVSYDEWDYGLEARVRDAVAIIA
MATSTMMLDRGPHTLLKSGCLGAPDKKGTKGGNPNEVLRYLMNVTFEGRNLSFSEDGYQM
HPKLVIILLDKERQWDRVGKWENGSLTMKYHVWPRFELYSDAEEREDDHLSIVTLEEAPF
VIVEDVDPLSGTCMRNTVPCRKQLKTQNQTGDSGIYIKRCCKGFCIDILKKIAKTVKFTY
DLYLVTNGKHGKKINGTWNGMVGEVVFKNAHMAVGSLTINEERSEVIDFSVPFIETGISV
MVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPG
GPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQ
EEYVDQVTGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYKEMHSYMTSFHQKNVNE
ALHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKDSGWKRAV
DLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITF
IAEHLFYWQLRFCFMGVCSGKPGVTFSISRGIYSCIHGVQIEENKSGLNSPSATMNMNMN
NTHSNILRLLRTAKNMTSVPGVNGSPHSALDYGHRESAVYDISEHRRSLVGHTDCKPPPP
YLPEDNMFSDYVSDVERTFGNMHLKDSNLYQDHYLHHHGGTGSALALGMSGPLPNRPRSL
GSASSLEGGMYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPTQSSFKSGLPDLY
GKFSFKGGASSSGFIAGHDRYCGGGGAGSGGDDGNIRSDVSDISTHTVTYGNLEGNAKRR
KQYRDSLKKRPASAKSRREQDEIELGFRRRTHHTIHHHHHHNHPVTQGHRSATPPVERKS
QRGANSSSYVFRDKENLRDFYMDQFRSKEGASPWEHLDLSDAPGMGGGGGLGGGGCGGVV
SSGGGGGACTSLVPVDDFLKGKSKKTECKGGVGGGGSPGQQGHACWEKSIGGVGGLAGGD
WECRNCHSGGGGGGKQVCMHGGGGGGGYSAAGGVGGSGGGGGGGSGQVSSRPSSATCKRC
DSCKKPGNLYDISEDNHLLLDQLGGKFVLEGGKGGGGGGGGGGGGAQTQAQRRKFGPGGR
VLRRQHSYDTFVDLQKEGAGRMGGSGFGGGGASMLPPPRSVSLKDKDRYMEGASPYAQMF
ERYAGGERETGFFAGGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGGGGMG
GTRGVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYVKKQQTQPQQQQTQQQQQ
QQQLLNNNRADFRGSMGVTSYLPASASAGVMSNVGPRFPKELCLGGPLGNHHGGAAGNNK
LLSARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgggctggcaatgttcaagggactgcgtcttcactcgtccgccatgcttgtc
agccttcgcttctctctcctccttctctcactcctcctcctgctgttcccagcctgcgag
tcacggcggggtggaggaggcggggccacaggtggcggaggcggggccgggggcgtgagc
agcagcacccgcggccactccatcatcgggccgccccactaccctccggcgccggctagc
ccagtggctgcgccgcagccgcccaagtttgcgcagggccttagcatcgccgtcatcctg
gtgggcaactccagcgaggtgactctggccgagggtgtggagaaggaggacttcctacac
gtgccgctgccgcctaaggtggaactggtcaccatgaacgaaacggacccgaagagcatc
attaaccgcatatgcgccctcatgtctcgcaactggcttcagggagtggtgttcggagat
gacaccgaccaggaggccatcgcccagatcctggacttcatctcagcccagacgcacatc
cccattctgggcatccgtggggggtcctccatgatcatggctgccaaggacgaccactct
atgttcttccagttcgggccgtcgatagagcagcaggcctccgtcatgctcaacataatg
gaggagtacgactggtacatcttctccatcgtcaccacctactaccccggataccaagac
ttcgtcaacaggatccggagtaccattgagaacagttttgtgggctgggagttggaggag
gtgatactgctggacatgtcggtggacgacggcgattccaagattcagaaccagctgaag
aagctccagagccctgtcattctgctctactgcactaaagaagaggccgccactatcttc
gaggtggcgcattctgtgggtctcactggatacggttacacgtggatcgtaccagcgctg
gtggcgggggacgcggacaacgtcccaaatgtttttcctacaggtctgatctcagtgtcg
tatgatgagtgggattatgggctggaggcccgggtgcgtgatgctgtggccatcatagcc
atggcaacctccaccatgatgctggaccgaggtcctcacacgctgcttaagtcaggctgc
ctcggcgcgcctgacaagaaaggcaccaagggaggaaaccccaatgaagtgctgagatac
ctcatgaacgtgacctttgaggggcgcaatctctcttttagtgaggacggataccagatg
caccccaagctggttattattttgctggataaggaaagacagtgggacagggtgggtaaa
tgggagaacggctctctgacgatgaagtaccacgtatggccgcgcttcgagctctattca
gacgccgaggagagagaagacgaccacctgtctatagtaactctggaggaggccccgttc
gtcatcgtggaggacgtggaccccctcagcggcacctgcatgaggaacacggtgccctgc
aggaagcagctcaaaactcaaaaccaaacaggagattcagggatctacatcaagcgctgc
tgcaagggtttctgcatagacatcctcaaaaagattgccaagaccgtcaagttcacctac
gacctctacctggtgaccaacggcaagcacggcaagaagatcaacggcacgtggaacggc
atggtcggagaggtggtgtttaagaatgcccacatggcagtgggctctctgaccatcaat
gaggagaggtcagaggtcatcgacttctccgtgcccttcatagagacgggtattagtgtc
atggtctcccgtagcaacggcacagtgtccccctcggcatttctagagccctttagtgct
gatgtctgggtgatgatgttcgtgatgctgctgattgtgtctgccgtcgctgtctttgtc
tttgagtacttcagtcctgtcggatataaccgctgtctggcagacggtcgagaacctggt
gggccctccttcactattggcaaggccatatggctgctctggggtctggtcttcaacaac
tctgtgcctgtccagaaccctaaggggaccaccagtaagatcatggtctccgtatgggcc
ttcttcgctgtcatcttcctggccagctacacagctaacctggccgccttcatgatccag
gaggagtacgtggaccaggtgaccggcctcagcgacaaaaagttccagcgtccaaatgac
ttttctcctccgttccgctttggcacggttcccaatggcagcacagagaggaacatcagg
aacaactataaagagatgcacagctacatgaccagcttccaccagaaaaacgtaaacgag
gccctccacagcctgaagactggtaaactggacgcgtttatctatgacgccgctgtgctg
aattacatggccggcagagacgagggctgcaaactcgtgaccatcggtagtggatacatc
tttgctaccacaggctacggcatcgccatccaaaaagactcaggctggaagagggcggtg
gatctcgccattctgcagctgttcggagatggtgagatggaggagctggaggctctgtgg
ctgactgggatctgtcacaacgagaagaacgaggtgatgagcagccagctggacgtggac
aacatggccggcgtcttctacatgctgggggcggccatggcgctgtcgctcatcaccttc
atcgccgagcacctgttctactggcagctacgcttctgcttcatgggcgtgtgctcgggc
aagccgggcgtcaccttctccatcagcaggggcatctacagctgcatccatggtgttcag
atcgaggagaacaaatcaggcctcaactccccatcagccaccatgaacatgaacatgaac
aacacacattcgaacatccttcgtctgctacgcactgccaaaaacatgacctctgtgcct
ggtgtcaatggctctccccacagcgccctggattacggccaccgcgagtcagctgtctac
gacatcagcgagcatcggcgaagcctggtaggccacacggactgcaagcctccgccaccg
tacttgcctgaagacaatatgttcagcgactatgtgagcgatgtggagaggacttttggg
aacatgcacctgaaggacagtaacctgtaccaggatcattacctgcaccaccacgggggc
acgggatccgcactggctctgggtatgtcgggtccgttgcctaaccgacctcgtagctta
gggagtgccagttcgttggagggtgggatgtacgattgtgacagcttagggggaggggta
gcgcccatctttaccacccagcctcgccagtcactgacgcacaggaacagggaaaagttt
gacctgatcgcaggccaccccacccagtccagcttcaagtctggcctgcctgatctgtac
gggaaattctccttcaagggtggggcatccagttcagggtttatagcgggacatgacagg
tactgcgggggaggtggggcgggctcgggaggggacgacggcaatattcgctcggacgtg
tcggatatttccacccacaccgtgacctacggcaatcttgaaggcaatgccaagaggcgc
aagcagtacagggacagccttaaaaagaggccagcatctgccaagtcccgtcgggagcag
gacgaaattgaactgggcttccggaggcgcacccaccacaccatccaccaccaccatcat
cacaaccatccagtcacacagggacaccgttcagccaccccacctgtggaacgcaagagc
cagagaggggccaatagctcctcatatgtgttccgtgacaaagagaacttgagggacttc
tacatggaccagttccgatccaaggaaggggcatccccatgggaacatttggatttgagt
gacgctcctggaatgggcggcggagggggtctgggtgggggtggatgtggtggcgtagtc
agcagcggtggtggagggggagcttgcactagtttggttcctgtggacgatttcttgaaa
ggtaaatccaagaagacagagtgtaagggtggagtgggaggaggaggatctcctgggcag
cagggccatgcatgctgggaaaagagcattggaggggtgggggggttggccggtggggac
tgggaatgccgtaactgccacagtggaggaggtggaggtggcaagcaagtttgcatgcat
gggggaggagggggtgggggctactcagctgcagggggtgttgggggatccggtggagga
ggaggtggtgggagcggacaggtttccagccgcccgagctcggccacctgcaagcggtgc
gattcatgcaagaagccgggcaacttgtatgacatcagtgaggacaaccacctcctcctg
gatcagctagggggcaagttcgtactggagggtgggaagggaggaggaggcggaggcgga
ggtggaggtggaggggcccagactcaggcgcagaggcgcaagtttggaccaggcggcagg
gtcctgcgtaggcagcattcttatgacacattcgtagacctgcagaaagaaggggcgggc
aggatgggaggttcaggatttgggggcggtggagcttccatgctccctccaccacggagt
gtgagcctgaaagacaaagatcgctacatggaaggtgcgagcccctatgcccagatgttc
gagcggtatgcaggtggggagcgggagacaggttttttcgctggcggggaccgggggaag
ggcgggggctcgtcatttagcttgttccgtgggggtgaaggtgggttgcaccgtcgttcg
gtaggcgagcgggacatgagggacagggatagaggcatgatgggaggaggaggtatgggc
ggtacccgaggggtcgggacttactccttgtctaaatctctctacccagataaggtgaac
cagaacccattcatcccgaccttcggcgacgaccagtgcctattacatggcgccaaatcg
tactacgtcaaaaagcagcagacacagccgcagcagcaacagacgcaacaacagcagcag
cagcagcagctcctcaacaacaaccgggctgacttccgaggctccatgggggtgacttcc
tatttgccagcctctgcctctgccggggtcatgtccaacgtgggaccccggttccccaag
gagctgtgcctgggtgggcccctcggcaaccaccacggaggggcggcgggcaacaacaag
ctgctgtcagcaagggacgggttagggatggggcaaggacagagaccattcaacggctct
agtaacggacacgtatacgagaagctctccagtattgagtcggatgtctga
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integrated database retrieval system
