Astyanax mexicanus (Mexican tetra): 103024999
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Entry
103024999 CDS
T05042
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103024999 (irx2a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103024999 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
103024999
NCBI-ProteinID:
XP_007254592
Ensembl:
ENSAMXG00000012654
UniProt:
A0A8B9KYA3
W5KZJ6
LinkDB
All DBs
Position
6:complement(28843100..28849791)
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AA seq
481 aa
AA seq
DB search
MSYPQGYLYQSPASLALYSCPAYGAQALARSDDLLRSSSSSSSSSSSSSSSCSSSSSCSS
SGSAFSPYPGSAAFSSPLPYSADPASAFPPYMGSPYDPHPAGLAAAAGAVGFAPYPGAGY
PYQLNDPTYRKNATRDATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA
RRRLKKENKVTWAPRSKSDDEDEEDGDGERKEERAGKSLENEEASAEDEGISLQVDSLTD
HSVESDGEKVTCRISDLVCSSGPDAKDKCDENDLDVGHGERRQGLSPKPVTSSPLMGVEA
PLLGHHHHHQDSRNKSKACLDSRTASEGQSQTVKPKLWSLAEIATSDPKQPLGQSCPSAV
GLLASTASGTSPAAPVYSASSILGRPLYYTSPFYSNYTNYGSFSPLQGQGILRYGSTGMA
ANEGLPQTVLSASAIHKHTSEHLLKSAHSQTEQHFRASNVESKKADSPDVCTVGPQSYLS
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccctcaggggtacctgtaccagtcccctgcctccctggcgctgtactcctgc
ccggcgtacggggctcaggctctggcgaggagcgatgacctgctccgctcctcgtcttcc
tcgtcctcgtcctcctcttcgtcctcatcttcctgctcctcgtcctcctcctgctcctcc
tcggggtctgccttcagtccttaccccggatccgccgctttctccagcccgctgccctac
tccgccgacccggccagcgccttcccaccctacatgggttccccctacgacccccacccc
gcgggtctggcggcagcagcaggtgccgtgggatttgccccctaccccggggcaggttac
ccctaccagctgaacgaccccacgtaccgtaagaacgccacgcgcgacgccacggcaacg
ctgaaggcctggctgcaggaacacaggaagaacccctatcccaccaagggggagaagatc
atgctggccatcatcaccaagatgaccctcacccaggtctccacgtggtttgctaatgcc
aggaggagactcaagaaggagaacaaagttacgtgggcgccaaggagcaagagtgatgat
gaggatgaagaagatggagacggcgagaggaaagaggagcgagctgggaagagtctggaa
aacgaggaagcttctgctgaggacgaaggcatcagtctgcaggtggacagcctgacggac
cattctgtagagtccgacggcgagaaggtcacttgcaggatcagtgatcttgtctgcagc
tctggacctgatgccaaggacaaatgtgatgagaatgatctggacgttggccacggagag
cggcgacagggtctgtcacccaagccagtgacctcttcacccctgatgggtgtggaggct
ccgctcttgggccaccaccaccaccaccaggactccagaaacaaaagcaaggcctgcctg
gacagtcgaacggcctcagaaggccagagccagacagtcaagcccaagctctggtccttg
gctgagatcgccacctcggaccccaagcagcccctggggcaaagctgcccctcggctgtg
ggtcttctagcttcaacggcctccggcacgtctccggccgctcctgtgtactcggcctct
tccatcctgggacggccgctgtactacacctcgcccttttacagcaactacacaaactat
gggagcttcagccctttgcagggccaagggattctgcgctacggctctactggaatggct
gctaatgagggacttccacagactgtgctcagtgccagcgccattcacaaacacacgtcc
gaacacctgctaaagtctgcccacagtcagactgagcaacacttcagggcttcgaatgta
gagtcgaagaaagcagactccccagatgtgtgcacagtaggacctcagtcttacctgtca
agctaa
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integrated database retrieval system
