Astyanax mexicanus (Mexican tetra): 103025021
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Entry
103025021 CDS
T05042
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04020
Calcium signaling pathway
amex04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
103025021 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103025021 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
amex04030
]
103025021 (ptafr)
G protein-coupled receptors [BR:
amex04030
]
Rhodopsin family
Others
Platelet activating factor
103025021 (ptafr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srd
CitMHS
7TM_GPCR_Srx
Tegument_dsDNA
Motif
Other DBs
NCBI-GeneID:
103025021
NCBI-ProteinID:
XP_007258999
Ensembl:
ENSAMXG00000033593
LinkDB
All DBs
Position
14:complement(44069847..44077235)
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AA seq
367 aa
AA seq
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MIPSDVPVTSRDQDPALLNATFLDSEFRYSLFPAFYGIVFILGLLANVYALFILHHMRET
KAMNEMRIYMTNLTVADLLFVCILPFWIDYYVRRGNWMYSDAMCRITGSLFFVNTYCSVL
FLTVISINRYWAVTQPLVAASSDCRKRGIIVSFFVWAVTLAAAAKQLTDPGVQEDQNISR
CFEGYHNDSREGKLGVAAIHFVIIGIFFAVFLLVILCNVRIAMTLLKQPISQPRPSTGRR
PQGTKRRALRMLCAVVGVFVVCFIPHHVVQGPWTLAVLQLTDWSQETRQGLNDAHQVTLM
LMGLNCLLDPIVYCFATRKFRKFIQSHLKKVRNGKACSNNTTTMTTNLSIKVRNPNELVS
VFEEPEK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgattccttcagacgttcccgtcacctccagagaccaagacccagccctcctgaatgcc
acattcctggactcggagttccggtactctctcttccctgctttctatggcatagtgttc
attctggggctgttggccaacgtttatgccctcttcatcctgcaccacatgcgggagacc
aaggccatgaacgagatgaggatttacatgaccaacctgaccgtggcggacctgctgttc
gtgtgcatcctgcccttttggatcgactactatgttcgccgtggcaactggatgtactcg
gatgcaatgtgtcgcatcactggctcgctgtttttcgtcaacacttactgctctgtgctt
ttcctgaccgtgattagcatcaaccgctactgggcagtgacacagccgctggtcgctgcg
tcttctgactgcaggaagcggggcatcattgtgtcctttttcgtttgggcagtcacgctg
gcagcagcagctaaacaactcacggaccccggcgtccaggaggaccaaaacatttcccga
tgctttgaagggtatcacaacgactctcgcgaagggaagcttggtgtggcagccatccac
ttcgtcatcatcgggatattcttcgccgttttcttgctcgtcattttgtgcaacgtgcgg
atcgccatgaccttgcttaagcagccgatcagtcagccaagacccagcaccggcaggcga
ccgcaaggcaccaagcgccgtgccctgcgcatgctctgtgccgttgttggcgtatttgtg
gtgtgcttcatccctcaccatgtggtgcagggaccctggacactggctgtccttcagcta
accgactggagtcaagaaacccgccagggtctgaatgatgcccaccaggtcaccctcatg
ctcatgggcttaaactgtctactggaccccatcgtctattgcttcgccacgagaaagttc
cgcaagttcatccagagtcacctgaagaaggtgagaaatgggaaggcctgctccaacaac
accacaaccatgaccaccaacttatccataaaggtcaggaacccaaacgaactggtcagt
gtctttgaggagccagaaaagtag
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integrated database retrieval system
