Astyanax mexicanus (Mexican tetra): 103025069
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Entry
103025069 CDS
T05042
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103025069 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103025069 (pou2f1b)
03021 Transcription machinery [BR:
amex03021
]
103025069 (pou2f1b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
103025069 (pou2f1b)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
103025069 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3638
Motif
Other DBs
NCBI-GeneID:
103025069
NCBI-ProteinID:
XP_049341039
Ensembl:
ENSAMXG00000002371
LinkDB
All DBs
Position
11:complement(5015910..5050714)
Genome browser
AA seq
732 aa
AA seq
DB search
MADGGAASQDESSGADSRMSNPSETSKCAMESGDGNTGAQTNGLDFQRQTVQTTNAITNA
HAQALLQQCKSEDSAELPASSQQGALTQTQLMLAGGQIAGLTLTPAQQQLLLQQAQAQLL
AAAVQQHSASQQSSTTGASISASAATPITQIPLSQPIQIAPQLQQLQQQQQNLNLQQFVL
VQPGHPIATQLQPAQFIISQTPHGQQSLLQAQNLLTQLPQSQANLLQTQPSITLTTQPAT
PTRTIAATPIQTLPHSQTTPKRMDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGL
AMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENQTSEQGLSSPSSLGSP
GLGMEGLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFC
NRRQKEKRINPPSSGSAGSTPIKAIFSTSTALAPSTASLVTSTTPTTLTVNPVLPLTSTS
VSSMGFTGTTVGAPSMNTASVISTVPAICTATSSPSLSPSPSALHASSSESSVAQEPITT
VTQAPSSLASTLASGQVMVAAPGLSAALQGAAQLPTSASIAAMAAAAGLSPGLMASSQFT
PGGALLSLAPGGLGSALSPALMSNSTLATIQGVWSALASSGTLPITSLDGSGNFLFANAS
AGSTPNLVTAPLFLNPQNLSLLTSNPVSLVSAGGAAGAAGALNLHVAADTHHSAVTTATV
PASTITTASKAQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggagcagattctagaatgagt
aatccgtcagaaacaagtaaatgtgcaatggagagtggggacggaaacacaggtgcccaa
acaaacggactggactttcagaggcagacggtgcaaacaacaaacgcaatcaccaatgca
cacgcacaggccctgctccaacagtgtaagtcagaggattcggctgagcttccagcctcc
agccagcagggtgcgctgacccagactcagctcatgttggccggggggcagatagctgga
ttgactctgaccccagcacagcagcagttgctgttgcagcaggctcaggcacagctgtta
gctgcagctgtgcagcagcactcagccagccagcagagcagcaccacaggagccagcatc
tccgcatccgctgccacacccatcacacagatccccctctcccagcccatccagatcgca
ccccagttgcagcagctgcagcagcagcagcagaacctcaaccttcagcagtttgtactg
gtgcagccaggccaccccatcgccactcagctgcagccggcacagttcatcatctcgcag
acgccgcatggccagcagagcctcctgcaagcccagaatcttctaactcaactacctcaa
agccaagccaacctcctgcagactcagccaagcatcaccctcaccacccagcccgcgaca
cccacgcgcacgatagcagctacccccatccagaccctccctcacagccagacaacacca
aagcgcatggacactcccagcctggaggagcccagtgacctggaggagctggagcagttt
gccaaaaccttcaaacaaaggaggatcaaactgggcttcactcagggggatgtcggcctt
gctatgggaaagctttatggaaacgacttcagccaaaccaccatttctcgctttgaggcc
ttgaacctgagctttaaaaacatgtgcaagctaaagcctctgctggagaaatggctcaac
gatgcagagaaccagacgtcggaacagggcctgtccagccccagctctttgggctcccct
gggctgggcatggagggcctcaacaggcgtcgcaagaagaggaccagcatcgagaccaac
atcagagtggccttagaaaagagctttctggagcagaaccaaaaacctacctctgaggag
atcaccatgatcgccgaccagctgaacatggagaaggaggtgatccgtgtgtggttctgc
aaccgccggcagaaggagaagaggatcaacccacccagcagcggcagtgccggcagcacc
cccatcaaagcaatcttctccacctccacagccctggcgccttccaccgccagtcttgtg
accagtaccactccgactacactgactgtaaatcctgttttgcctctcaccagcacaagt
gtctccagcatgggctttactggcactactgtgggcgccccctcaatgaacactgcatcg
gtcatctccacggttcctgccatctgcacggcaacctcctctccctcactcagcccctcc
cccagcgccctgcatgcgtcctcgtctgagtcttcggtggctcaggagccgataaccacg
gtgacccaggccccgtcctcactggccagcacactggctagcggtcaggtgatggtggcg
gctccgggtctgtcggctgctctgcagggggcggctcagctgcctaccagcgccagcatc
gccgccatggctgcagcggctggtcttagcccaggtctcatggcctcctcacagttcact
cctggtggggctctgctgagtctggctcctggtggtctgggcagcgcattgagtccggca
ctgatgagcaacagcaccttggccactatccaaggtgtgtggagcgctttggcctctagc
gggactctgcccatcacctctctagatggcagtggtaacttcctgttcgccaatgccagc
gcagggagcacgcccaacctggtgacggcgccccttttcctcaacccccagaacctgtct
ctgctcaccagcaacccggtcagcctggtgtctgccgggggggccgcgggggctgccgga
gccctcaacctgcacgttgccgctgacacccaccacagtgccgtcaccacggcgaccgtg
cctgcctccacaatcaccaccgcctccaaggcccagtga
DBGET
integrated database retrieval system
