Astyanax mexicanus (Mexican tetra): 103025260
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Entry
103025260 CDS
T05042
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103025260 (ntrk1)
04020 Calcium signaling pathway
103025260 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103025260 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amex01001
]
103025260 (ntrk1)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103025260 (ntrk1)
Protein kinases [BR:
amex01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
103025260 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
ig
LRRCT_2
Ig_2
LRR_8
TrkA_TMD
C2-set_2
LRR_5
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
103025260
NCBI-ProteinID:
XP_022524425
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All DBs
Position
1:complement(115086819..115145765)
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AA seq
799 aa
AA seq
DB search
MAGKAWCQLALALALVLCLLQPALSGCPGACRCSFAMVQCLEADGITSIPSLAPQESENV
TEIYIENQPSLENITDIDLANYRELKNLTVTDCGLVFIADNAFQQNFKLQYVNLAINSLV
HISWRVFHSLPLLNLVLRDNPLACSCDIYWLQQWQRTRRGDIDSQQSCIYNGSSVQLDSF
VMENCSVPEVTVNAPVRTIKEGGNLTFECQVTGSPVPTITWRTEQLQSNWTLQRGIWGST
LELVLHLWNVSSGDNLHNLTCEAENRAGPGEAMVQLNIEFAVKILFLREAEQQHHWCFPF
AIDGNPAPTISWQYNTTPLNETRYTYTQLIPDQDDGSVQHGCLFLNKPTHLNNGNYTLIV
ENKLGRDQATAIGMFMDNPFDPFDPEGIIPVLTNAPAPTNSTDVTEKLESRLFGVSVAVG
LAVFACTFLLIMVLVINKCGQHSKFGIHRSSVLGTEDDLAVSLRFMNFGASPPSSDEGTL
DSGLSSFVENPQYFCGIIKDKDMCVQHIKRQDIMLKWELGEGAFGKVYLAECANLCPDTD
KMLVAIKTLKDANESTRQDFQREAELLTVLQHEHIVRFYGVCTDGEPLAMVFEYMRHGDL
NRFLRAHGPDARILDEVKMPPMGQLTLPQMLQIAAQIASGMVYLASLHFVHRDLATRNCL
VGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFGVVL
WEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHLLMQGCWQREPQQRLVIKDI
YSRLVALVKNPPVYLDILE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaaggcttggtgccagttggccttggctctggcactggtgttgtgcctgctt
cagcctgctcttagcggttgcccaggggcctgtcgctgttccttcgccatggtacagtgc
ctggaagcagatggcatcaccagcatcccgtcactggcaccacaggagagcgaaaacgtc
acggaaatctacatcgagaaccagcccagcctggagaacataaccgacatagacctcgct
aactacagagagctgaagaacctcacagttacagattgtggcttggtcttcatcgctgat
aatgcatttcaacagaacttcaagctccaatatgtaaacctggctattaactcacttgtg
cacatcagctggagagtcttccattctcttcctctactgaacctggttctgagggataac
cccctggcctgctcctgtgatatctactggcttcagcagtggcaaagaacgaggcgagga
gacatcgacagtcagcagagctgcatctataacggcagcagcgttcagctggacagcttt
gtgatggagaactgcagtgtgccagaagtcacggttaatgcacctgtccggaccattaag
gaagggggaaatctgacgtttgagtgccaggtgaccggttcaccagttcccacaataaca
tggaggaccgagcagcttcagtccaactggacccttcagagaggaatatggggctccact
ctggaactggtgctgcacctgtggaacgtgtcatctggggacaacctgcacaacctcacc
tgcgaggcggagaatcgagcgggtccgggagaggccatggtgcagctcaacattgagttt
gcagtgaagatcctgttcttacgggaggccgagcagcagcaccactggtgtttccccttc
gctattgatggaaacccagctcccaccattagctggcagtacaacaccacacccctcaac
gagaccaggtacacctacacccagctgatcccggatcaggacgacggctccgtccagcac
ggctgcctcttcctcaacaagcccacccacctcaacaacggcaactacacgcttatagtg
gagaacaagctgggcagagaccaggccacggccatcggcatgttcatggacaaccccttc
gacccatttgatccagagggcatcatccctgtgttaaccaatgctccagctcccaccaat
tcaaccgatgtgacagagaagctggagagcaggctgttcggggtgtcggttgctgtagga
ctggctgtgtttgcctgcacgtttctcctcatcatggtgctggtcatcaataagtgcggg
cagcactccaagtttggcatccaccgatcgtctgttctaggcactgaagacgacctcgcc
gtctctcttcgcttcatgaactttggtgccagtcctccatcctcagacgaaggcacgctg
gactctgggctgtccagctttgtggagaaccctcagtatttctgcggaatcatcaaggac
aaggacatgtgtgttcagcacattaagagacaggacatcatgctgaagtgggaacttgga
gaaggagcctttgggaaggtttacctggctgagtgtgccaacctctgtcccgacactgac
aagatgctggtggctatcaagacgctgaaagatgccaatgaatcgactcgtcaggatttt
cagcgagaggctgaacttctgaccgttctccagcatgagcacatcgtccgattctacgga
gtgtgtacggatggagagcctctcgccatggtgtttgagtacatgaggcacggagacctc
aaccgattcctcagggctcacggtccagacgctcggatcctggacgaggtgaagatgcca
ccaatgggtcagctgaccctgcctcagatgctccagattgccgcccagatcgcctcaggc
atggtgtacctggcctcactacacttcgttcacagagacctggccactaggaactgtctg
gtcggtgaaggtcttgtggtcaagatcggagacttcggcatgtccagagacatctacagc
accgattactacagggttggaggcagaaccatgttgcctattcgctggatgccgcctgag
agcatcatgtacagaaagttcactacagaaagtgatatctggagctttggggttgtactt
tgggaaatcttcacttacggaaaacagccctggtaccagctctccaacagtgaggcgatt
gaatgcatcacgcagggccgtgagctggagcggccgcggacgtgtcccaaagaggtgcac
ctcctcatgcagggctgctggcagagggagcctcagcagcgcctcgtcatcaaagacatc
tacagccgcctggtggccttggtcaagaaccccccggtctacctggacatattagagtga
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