Astyanax mexicanus (Mexican tetra): 103025271
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Entry
103025271 CDS
T05042
Symbol
polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03020
RNA polymerase
amex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103025271 (polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
103025271 (polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103025271 (polr2j)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103025271 (polr2j)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103025271 (polr2j)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103025271 (polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
103025271
NCBI-ProteinID:
XP_007245355
Ensembl:
ENSAMXG00000007517
UniProt:
A0A8B9R4L4
W5KJG2
LinkDB
All DBs
Position
1:29553953..29558320
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAG
YKVPHPLEHKIVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctccgccggccttcgagtcgtttctgttgtttgagggggagaaaaagattaca
attacaaaggataccaaggtgccaaatgcctgtttgtttacattgaacaaagaagaccat
acactgggcaacatcatcagatcacagctactgaaggaccctcaggtgctgtttgctggg
tataaagtgccccatccactggagcacaagattgtgatccgtgtgcagacaacaccagat
tacagtcctcaggaagctttcacaaatgctatcactgacctcatcagtgagttgtcactg
ttggaagaaaggtttagggttgccattaaagacaagcaggagggcatcgagtga
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