KEGG   Astyanax mexicanus (Mexican tetra): 103025298
Entry
103025298         CDS       T05042                                 
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103025298 (si:ch211-141o9.10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amex03400]
    103025298 (si:ch211-141o9.10)
Enzymes [BR:amex01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     103025298 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     103025298 (si:ch211-141o9.10)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-GeneID: 103025298
NCBI-ProteinID: XP_007251318
Ensembl: ENSAMXG00000029448
UniProt: A0A3B1IZP2
LinkDB
Position
15:complement(23618551..23625216)
AA seq 333 aa
MGPRKRGERKRKAEENSAQDEEVADTSGAGKSSERSAGKVVSGKKSRTKGGKKYIGAHVS
ISGGIWKAVEDSVELGGRSFALFLGSQRTWQRPALDQSAAVKFQKACAQHGFDPTHILPH
GSYLMNCGSPKQDVFTKSQAMLVDELSRCSALGLTQFNFHPGASIDSSTEKCIERIAQAI
NHAHNQTSAVITVLENMSGQGSTVGGQFNELKRIIDRVRDKTRVGVCLDTCHAFAAGYDI
SKAGGVKSMLDQFDQEVGLHYLRAFHLNDSKGILGCHLDRHEDIGCGNIGISAFRDIVNE
PRLDNIPLILETPGRPGFEYAEQIKLLYSLCED
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgggtccacgaaagagaggagaaaggaagagaaaagcagaagaaaattctgctcaagat
gaagaggttgcagatacaagtggagcaggaaaatcatctgaacgcagtgcaggtaaagtg
gtgagcggaaagaagagccggactaaaggaggaaagaaatacattggtgctcatgtctct
atatcaggaggcatatggaaagcagtggaagacagtgtggagctggggggacgcagcttt
gccttatttctgggctcccagcgcacctggcaaaggccggccctcgatcaatctgctgca
gtaaaattccagaaggcttgtgctcagcatggatttgacccgacacatatccttcctcat
ggatcttacctgatgaactgcggctcacccaagcaagatgtgtttactaagagccaggcc
atgctggtcgatgaactaagtcgctgcagtgctttgggcctcactcagtttaatttccac
cctggggcctccattgactccagcacagagaagtgcatcgagaggattgcccaagctata
aaccacgctcacaatcaaacatctgctgtcatcactgtgcttgaaaatatgagtggacag
gggagtactgtaggcggacagtttaatgagctgaagagaataattgatcgcgttcgagac
aagacacgtgttggagtgtgtctggacacatgtcatgcatttgccgcaggttatgacatt
tcaaaggctggaggagtgaaatctatgcttgatcagtttgatcaggaggttgggttgcat
tacctgagagcatttcatctcaatgactcaaaaggtatattgggctgtcacttggaccgc
catgaggacatagggtgtgggaatattgggatctcagctttccgagacattgtgaatgag
cctcgcctggacaacatccctctcatacttgagactcccggacgcccaggttttgagtac
gctgaacaaataaagcttctatattctctttgtgaggactag

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