Astyanax mexicanus (Mexican tetra): 103025348
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Entry
103025348 CDS
T05042
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03430
Mismatch repair
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103025348 (mlh1)
03460 Fanconi anemia pathway
103025348 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103025348 (mlh1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103025348 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103025348
NCBI-ProteinID:
XP_022540961
Ensembl:
ENSAMXG00000029258
LinkDB
All DBs
Position
7:complement(2257323..2270275)
Genome browser
AA seq
738 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDLEIVCERFTTSKLQTFEDLTSISTYGFRGEALASISHVAHVTITTKTADGK
CAYRGNYCDGKLKAPPKPCAGNQGTLISVEDLFYNVPTRRKALKSPSEEYSRIVEVMSRY
AIHNSGKSFTVKKQGEMVADVKTLPNASVLDNIRVVFGVAVSREMIEVGCEDQKLAFKLK
GYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESIQKHIESKLLGSNSSRTYFTQTLLPGLSASVSEVKASS
SSSAEPGERVYAHQMVRTDSKAQKLDAFLQPVSKPASVTITASTASTASPPAPAQPTAEP
EDSEMLEVLEEVETDASKDLQVDCEPVQSETPPRKRAHVDEDKAELTAACTPRRRVIKLS
SIKELRSEITDQTHKVLYRGTHDSQFLRLQEMLQNHSFVGCVNPQWSLIQHHTKLYLLNT
SKLSQELFYQILIYDFGNFGVLRLSSPAPLYELAMLALDSEESGWTEEDGPKEGLAQYIV
DFLKKKSEMLEDYFSMEVDEDGNLTALPLLLDNYTPAMEGLPLFILRLATEVNWDSEREC
FRDFSKECSHFYSIRKQFTLEPDAADGPDAEPSWRWKVEHVLFKAFRSLLSPPSRCSEDG
SILQIASLPDLYKVFERC
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtgattcggaggctggatgagaccgtggtgaaccgcatcgcagcgggagag
gttattcagcggcccgctaacgctattaaagagatgatagagaactgcctggatgcgaag
tccaccaacatccaggttactgtgaaggagggagggttaaagctgatccagattcaggac
aacggcactggaattaggaaagaagacctcgaaatcgtgtgtgagcgatttactacgagc
aagcttcagacttttgaggatctcacgtctatttcgacatacggtttcagaggagaggct
cttgccagcattagtcatgtcgcccatgtgacgattactacaaaaacagcggatggaaaa
tgtgcttatcgagggaattactgtgatggaaagctaaaagctccaccaaaaccatgtgct
ggaaatcaggggactcttatttcggtggaagatctgttctataacgtgccgactcgacgg
aaagccctgaaaagtcccagtgaagaatactcccggattgtggaggtcatgagtagatac
gctattcacaactctgggaaaagctttactgtaaaaaagcaaggagagatggtggcggat
gtgaagactctacccaacgcttcagttttagacaatatccgggttgtgtttggagtggct
gtgagcagagagatgattgaagtggggtgtgaagatcagaagctcgcctttaaactgaaa
ggatacatttccaatgcaaattactccgtcaaaaaatgcatcctcatcctcttcatcaac
catcgtttggtggaatccagtgctttgaagaaagccattgagaccgtctacacagcgtat
cttcccaagaacactcatcctttcctttatctcagtctagaaattgctccccataacatt
gacgtgaacgtgcatccaaccaagcatgaggttcacttcctgcatgaagactgcatcatt
gagagcatccagaaacacattgagagcaaactgctcggctccaactcgtcgcgcacctat
ttcacacagacgttacttcctgggctctcagcgtccgttagtgaggtaaaggcttctagc
agctcctcagcagaaccaggggaacgggtctacgcccatcagatggtccgtaccgacagt
aaagcccagaaactggatgcgtttctccagccagtgagtaaaccagcctcagtcaccatc
actgcctccactgcctccaccgccagccccccggctcctgcccagcccacagccgagcct
gaagactcagaaatgctggaagtcctggaggaagtcgagacggatgcctcaaaagatctt
caggttgattgtgaacctgtccaatcagagactccccccaggaaacgagctcatgtagac
gaggataaggccgagctcacggccgcctgcacacccaggagacgcgtcatcaaactgagc
agtataaaggagctgaggagcgagatcactgaccaaacacacaaagtgctttataggggt
acgcatgactcccagtttctgcgtctgcaggagatgctacagaatcactcgtttgttgga
tgtgtgaatccacagtggtctctgattcaacatcacaccaaactctacctgctgaacacg
agcaaactcagtcaggagctgttttaccagatattaatttatgattttggaaacttcggt
gttctgcgtttgtcaagccccgcccctctgtatgagctggcgatgctggcgctggactct
gaggagagcggctggacggaggaggacgggcctaaagagggactcgctcagtacatcgta
gatttcctgaagaagaaatcagagatgctggaggattatttctccatggaggtggatgag
gacgggaatctgacagctctgccgctcctgctggataactacacccccgctatggaggga
ctgccgctcttcatcctcagactcgctacagaggtgaactgggacagtgagagagagtgt
ttccgggacttcagtaaagagtgcagtcatttctactccatcaggaaacagttcactctg
gaacccgacgcagccgacggcccggacgctgagccgagctggaggtggaaggttgaacac
gttctctttaaggcgttccggtccctcctcagccccccctcacgctgcagcgaggacggc
agcatcctgcagatcgccagcctgcccgacctctacaaagtgttcgagagatgctga
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integrated database retrieval system
