Astyanax mexicanus (Mexican tetra): 103025355
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Entry
103025355 CDS
T05042
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103025355 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103025355 (prdm2b)
03036 Chromosome and associated proteins [BR:
amex03036
]
103025355 (prdm2b)
Enzymes [BR:
amex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
103025355 (prdm2b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103025355 (prdm2b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103025355 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
Zf-C2H2_ZNF451_C
Zap1_zf1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
103025355
NCBI-ProteinID:
XP_049327756
LinkDB
All DBs
Position
24:34308123..34325618
Genome browser
AA seq
1585 aa
AA seq
DB search
MRDSEEGINKEEKRPSAVSEPTQEIEASHSSSTETKNPHPSQALSTEMEQKEGEEVDHRE
TELSWPQKSPEHPAEPEESADRREQPNPHLIPGSLVKESSVSPLREAERASSVVSPELEA
EGDPDFEDDAPGGTGNHPCQHCERHFSTKQGLERHVHIHTIANHQTHTFKCKYCTKPFGS
QVGRRRHERRHENRSKTLKRPSSSLAGTAFPLSPSRLNDSPPTSDCVTSPSPTIIMTSQN
GPPQPGSDTKDAGADPEHTFVLDENGESKELHPCKYCNKAFGTHTNMRRHQRRIHERHLM
PKGVRRKGILLQDMPSQQHPEEEGPVTAQSLQKASPNASPPPVYVPSVDTEDEGEREEGM
VNISKNISENLSLYIDGKILSTNTVSTCEVIEVDSSTAALFGLDTVILNPNQISQALKVE
TQPSPVKEASATVPKRRTSTPPLLPAVKMESETHLLSSAGTSSCTSSQSPLLVGTVLPQS
TETLAFQKEKTVYLSPKLKQLLQTQDSQKPALTLIADSHRLTTPLSVTSLPAAQGRFKRR
TASPPTPAQSSSSLSPESCSNIETGDSFTLKVPKVESHCTVQSWSSPSSDQRDSVSPCGK
DWAASVSGGNSCNQLPLDLSSAVSKKDSRTSSKASGESVLDLSLHRKGAGAPTAQHGISL
APHVKRKKPNTSMLEKVLMNEYAGLSVAGEEGSTSLDSPDAANSSPGSDAGVSPASPSSN
SENLPCENPCESSPPPSLTPVTINPSSPSSSSLASSTPPPPVLPSVPSPPPLTSRQSLDS
FPKLSPKPIDSPLEEEMSKSSAEETSHDLNIKDFNQTAKQLDPMTYALPQSPQGTKRHYK
ADSFSKSGTLHKGSPIKTADYAVSSCEKYSDSEDSQSNSFDESFPPDLNSIKTEGRKQPQ
SSHSPVLSTSSNSNKESPSSSSPPFSSYKVEEDSQSSTAGPSADDMVVNNETVTIGKVES
EIAASTEDVSSTGGNAAVKTLDSAETETETSEQDTFTKSFVCNVCEQPFHSIKELSSHIM
QHAVEWPFKCEFCVQLFQNSSALLEHRSSLHGVGKIYICSVCSKEFAYLCNLQQHQSDLH
PGQSCAHTSVENGKLRPQNYTDAANMQAIIERNSLHSTTDTSVDDDPQDSSEVCSDKDIK
KENGDDLTGQEDPTEELYTTIKIMASEAGKPKGPDVRLGINQHYPSFKPPPFPYHNRTSA
ANVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILACANASDKRRYTPKKNPI
PLKQIVKKPQNGVMLLSTAATAAGGQNAFRRMGQPKRLNFNQEIPAKMKMTALNKKKNQL
VQKAISQKNKTAAAASAKKASVQVKEEQQPSSVCPYCNREYTYAASLAKHVAGSCPQKPA
AKKKQKTPTLKDKNVNLRTRVTDSEIKQEPEANQVTTGRPQGKSRARNTETVEIELATPA
KEGKESKGKAGTSQARSSKRPAASTASSNTDNSAPKSKKGRKSGSSVQPVTPPSSSPPAV
VNEPAARTTTKTPRVTKDKEKGKEKEKDTVVPKKETETKSQVQTKKEERFSKRTPRERVG
GPVTRSLQSSSGEVKNEDQHKEPGD
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgactcagaagaagggataaataaggaggaaaaaagaccctcagcagtttcagag
ccaacccaggagattgaagcatctcattcatcctccacagagaccaagaaccctcatcca
tctcaggctctttccacagagatggagcagaaggagggcgaggaagtagatcacagagaa
actgagctgtcctggcctcagaaaagcccagagcaccctgctgagccggaggagtcggcc
gacaggagagaacagcctaaccctcacttaattcctggcagccttgtgaaggaaagctcc
gttagtcctttacgtgaggctgagcgagcgtcctctgttgtgtctcccgaattagaagca
gagggggatcctgactttgaggacgatgctccgggcgggactggaaaccacccttgccag
cattgcgagcggcatttctccaccaaacaaggtctggagcgccacgttcacatccacacc
atcgcaaaccaccagacgcacacgttcaagtgcaaatactgcaccaagcccttcggctcg
caggtaggcaggcgtagacacgagagacggcacgaaaacaggagtaaaactctgaaaagg
ccgagttcttctcttgcaggaacagcttttcccctgagtccctccaggcttaacgactct
cctcctacctccgattgtgtaacgtctccgagccctaccatcatcatgacttctcagaac
ggtcctcctcagccaggctctgatactaaggatgctggagcagaccctgaacacaccttc
gtcttagatgaaaatggggaatcaaaggaattgcacccttgcaaatattgcaacaaggct
ttcggcacgcatacaaacatgcgcaggcatcagcgcaggattcacgaacgtcaccttatg
ccgaaaggtgttcgcaggaaaggtattctcctacaggacatgccatcccaacaacatcca
gaggaagaaggtccggtcacagcacagtcactccagaaggcgtcgccaaacgccagccca
ccgcctgtctacgtacccagtgtagacacagaggatgagggcgaacgagaagagggcatg
gtcaacatttccaaaaacatctccgagaacctcagcctttacatagatggcaagatcttg
tccacaaacactgtcagcacctgtgaagtgatcgaggtcgactcgagcactgctgcactg
ttcggattagacacggtcatactgaatcccaaccagataagccaggcacttaaagttgaa
acgcaaccttcgcctgtgaaagaggcttcggctacggttccgaaaaggagaacttccaca
ccgccgcttcttcctgcagtgaaaatggaatctgaaactcacctgctttcgtctgctggc
acttcgtcctgcacttcctctcaatcgcctttattagttggcaccgtcctcccacagtcc
acagagacgttggcgttccaaaaggagaagaccgtttatctttctcccaaattgaaacag
ctcctgcagacccaggacagtcagaaaccagctcttactctaattgcagatagccataga
ttgactactccactttccgtaacctccctccctgctgctcaaggcagattcaaaagaagg
accgcttcccctccgactcctgctcaaagcagctcttcgctgagccctgaaagctgttca
aacattgaaacgggggattcatttacgcttaaggtgccaaaggttgaaagccactgtacg
gtccagtcctggagttcacccagcagtgatcagagggactcggtgagtccctgtggaaag
gactgggctgcttccgtaagtggaggcaactcttgcaatcagctgcctcttgacctttct
agtgcagttagcaaaaaagacagcaggacctctagtaaagcgtctggagaatctgtgctg
gatttaagcctgcatcgtaagggtgcgggtgcaccaacagctcaacatggaatttcttta
gcgcctcatgttaagagaaagaagcctaacaccagcatgttggagaaagttcttatgaat
gagtacgctggcctaagtgtagcaggagaggaaggttctacaagcctcgacagtccagac
gccgccaactcctctccaggcagtgatgcaggcgtatccccggctagtccctcttccaat
tcagaaaaccttccttgtgaaaatccttgtgaatcttcgcctcctccttccttgactccc
gttactattaatccttcttctccatcgtcctcaagcctggcatcctcaacgcctcctcct
ccagttctgccatctgtcccttcacctccacctctaacttctcgccaatctctggactct
tttcccaaactctctcccaagcctattgacagtcccctagaggaggaaatgtccaaatcc
tcggcagaagaaacaagccatgatctcaacattaaagacttcaaccaaactgctaagcag
ttagaccccatgacatatgcactgcctcaaagtcctcagggcacaaaaagacattataaa
gcagattccttttcaaaatctggaacactacataagggctcccccataaaaactgcagat
tatgcggtttcctcctgtgaaaagtattctgactctgaagacagccaaagtaattccttt
gatgaaagtttccctccagacctcaacagcattaaaactgagggacgcaagcaacctcaa
tcctctcattctcctgtactctccacttcttctaattctaataaagaatcaccctcttct
tcttctcctcctttttcttcttacaaagtagaggaagattcccagtcctctactgcaggg
ccatcagctgatgatatggtggtcaataatgaaactgttacgattggaaaggtggaaagt
gaaattgcagccagcactgaagatgtttcctctactggaggaaacgctgcagtaaaaact
ttagactctgcagagacggaaactgaaacatcagagcaggacacatttaccaagagcttt
gtgtgcaacgtctgtgagcagcctttccactcgattaaagaactcagcagccacatcatg
cagcatgccgtcgaatggcctttcaaatgtgaattctgtgtgcaattatttcaaaattct
tcagctcttctggagcatcgctcctctctccacggtgttgggaaaatttacatttgctct
gtctgttcaaaagagtttgcttacctttgcaaccttcagcaacaccagagcgatctgcac
cccggacagagctgtgctcatacatctgtagaaaacggcaagctgagaccgcagaattac
acagatgctgcaaatatgcaggcaattattgagagaaattccttgcattcaaccactgac
acatctgtggatgatgaccctcaggattcctccgaggtgtgtagtgataaagacattaaa
aaggaaaacggtgatgatctaaccggacaagaggatcccacagaagagctgtacactaca
ataaaaataatggcctcagaggccggaaagcctaaaggcccagatgtgcgtctcggcatt
aatcaacactaccccagctttaagcctccacccttcccctaccacaaccgaacatctgct
gccaacgtagcatctgcaaccaacttcaccacacacaacatccctcaaacgtttagcacg
gccatcaggtgcacaaagtgtggtaacagcttcgacaacatgcccgaactccacaaacac
atcttagcctgtgctaatgctagtgataagaggcgctacactcccaagaaaaaccccatt
cctctgaagcagatcgtgaagaagcctcagaatggtgtcatgctgctgtcaactgctgca
acagctgccggcggtcaaaatgccttccgcaggatgggtcaacccaagcggctcaacttc
aaccaggagatacccgccaagatgaagatgaccgccttgaacaaaaagaagaaccagctt
gtccagaaggcgatatctcagaagaacaagactgccgctgctgcgtctgcaaagaaggct
tctgtacaagttaaggaggagcagcaaccaagcagcgtctgcccgtactgcaatcgcgaa
tatacgtacgctgccagccttgcgaagcatgtcgcaggcagctgtcctcagaaaccagct
gctaagaaaaagcaaaaaacaccaaccctcaaagacaaaaatgtgaatcttcggactcga
gtcacggactctgaaatcaaacaagaacctgaggccaaccaggtcacgaccgggcgtcct
caggggaaatcacgggcgcggaacacagaaaccgtagagattgagttggctacaccagct
aaggaagggaaggaaagcaaaggaaaagcggggacgtctcaggctcgttcctccaaaaga
cctgcagcctctactgcctccagtaacacagacaactcagcacccaaaagcaagaagggc
agaaagagtggcagcagcgttcagcccgtaaccccgccctcctcatcgccgcctgctgtt
gtgaatgagcctgcggcacggacaaccacaaaaactccacgtgttacaaaagataaagaa
aaaggtaaagagaaagagaaagacactgtggtcccaaagaaggagactgaaaccaaatcg
caggtccagaccaagaaagaggagcgtttctctaagaggacgccgcgggagcgagtgggc
ggtcctgtcacccgcagtctgcagagttccagcggggaggtgaagaacgaagaccagcat
aaagaacctggggattaa
DBGET
integrated database retrieval system
