Astyanax mexicanus (Mexican tetra): 103025397
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Entry
103025397 CDS
T05042
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103025397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103025397
03036 Chromosome and associated proteins [BR:
amex03036
]
103025397
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103025397
Coactivators
SAGA/TFTC/STAGA complex
103025397
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103025397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
103025397
NCBI-ProteinID:
XP_022535618
Ensembl:
ENSAMXG00000029195
LinkDB
All DBs
Position
9:complement(39771847..39924070)
Genome browser
AA seq
1103 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLGGRSDPVTAAASSVSGTASSGAARGGGG
GANHRLARALPARTGSSSTSEQQQQQQLQQRKNGTNRDSDSGGRPEREEKPDSSSSESGG
RASVSASSRCISSSSTSTSSSTPTGSVSEGSLLTGTSAPVSGSSGGGGGNGGSGPGNGNT
RKAKQHVSCATVRTRRSGAQSVNGDGVGGALATTASSPVKSSTSSSSNNNNTTASTTNTT
ATTTSTFNTSTSSISAPAAAVTVSLTTGSSCATVTTAAAAAAAAATTTAAAAASIALDRG
TPTIALHRLPSHIVASLAQNRNGTTVSALVQQGALSPGVSPQVNHDKTAAKSPAGQSPGG
DEAAAAAGKPGAVMVIPSAGDPSPKPSTITTTATVTASSVAVAVPVPTHNSAPSSTAPLS
TTAAVTLAPAPAAPPPPATVPATAATVRLAPPASVAALQPPQARAALTAPQRIVAPQLIV
RAPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALAQAQAQAQAQAQVQAQVQAQV
QAQSNLSPRPATPTTGATFRVATPQSPVSCQAPRAVPALQCKVAQSPTPSPAPQTSTAAS
AALTRAPLAAAAVAVTAPQQVPAAMGPQGPHGQPTLAPPSAAGPAPGAPVISQEMQENVK
KCKNFLATLIKLASHNSPSPETSRNVKSLVQDLLDAKIEPEEFTNRLQSELKSSPQPYLV
PFLKKSLPALRLSLLNSQQSLTQPVQPAKTSITPTGAVAGTAATGNAIRQPNSTTVLPQG
IKRPGVAGQGQIRMPVVVTQTVRPAGAVGKVQPIQTSKCPTALPVQLSGTQKNKVNDPGG
GSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLPTGLLHRRILET
AKKYGVTEVPLEAVNFISHATQSRLRTVLEKVTSIAQHRMDSNKDEEWYEQSSDVRSQLK
FFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDAN
LTALAAIGPRKKRKVDSPGATTSGTEVSGSSAGSPASSSTVSTSSRQYPRQRITRVNLRD
FIFYMEQERETNRSLLLYRALLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgaccctctggaagacatgctgttctcggaggtggacgagaaagcc
gtcagcgacctggtgggctcgctggagtcgcagctgggcggccggagcgacccggtgact
gcggcggcctcgtcggtgtcgggcacagcatcctcgggagcggcgcgcggaggcggcggc
ggcgcgaaccaccgcttggcgcgagcgctgcctgcgcgaacgggcagcagcagcacatcc
gagcaacaacaacaacagcagcttcagcagcggaaaaacgggactaaccgggactcggac
agcggcgggagaccggagagagaggagaaaccggacagctcgagctccgagagcggcggg
agagcgagcgttagcgcgagcagccgctgcatcagcagcagcagcacgagcaccagcagc
agcaccccgaccgggtccgtatccgagggcagcttgctaacgggaacttctgccccggtc
agcggcagcagcggaggaggaggaggtaacggaggaagcgggcccggcaacggtaacacg
cgcaaagcaaaacagcacgtctcgtgcgcgaccgtgcggaccaggcgctccggagcccag
agtgtgaacggggacggtgttggaggagcgctcgcgaccacagccagctctccggtgaag
agcagcacgagcagcagcagcaacaacaacaacaccacagcatccactacgaacaccacc
gctaccaccacctccaccttcaacacctccactagcagcatcagcgctcctgcagctgct
gtcaccgtctccttaacgacggggtccagctgcgcaacggtaacaacagcagcagcagca
gcagcagcagcagcgaccaccacggcggcggcggcagcgtccatcgcgctggaccgggga
actcccaccatcgcgctgcaccggctcccgagccacatcgtcgccagtctcgcgcagaac
cgcaacggcaccaccgtgtctgcgctcgtgcagcagggcgcgctgagtcccggcgtgagc
ccgcaggtgaaccacgacaaaaccgcggcaaagtcccccgccggtcagtctcccggtggc
gacgaagcagcagcagcagcaggtaaacccggcgccgtgatggtgatccccagcgctggg
gaccccagccctaagccctccacaataacaacaacagccacagtcacagcctcgtccgta
gccgtagctgtccccgtcccgacccacaactccgcacccagctccactgcgcccctcagc
acgactgcagccgtcaccctcgcaccggctcccgcagcaccaccaccaccggccacggtc
cccgccaccgccgccacggtgaggctcgccccgccagccagcgttgctgcgctgcagcct
ccgcaggctcgagccgcgctcacagccccacagcggatcgtggccccgcagctgatcgtc
agagctccgcagcagcagaccaccatccagctgcctcccggcttcactatcccgcccggg
atggttttggtgcgaacggaacttgggcaactggtgatggttcctcagcaggcgctggct
caagctcaggcacaagctcaggctcaggctcaagttcaagcccaagttcaagctcaagtt
caggcccagagtaacctgtctccacggccagcaaccccaaccactggagccaccttcaga
gtcgccacaccacagtctcctgtttcatgtcaggcccctcgggccgttcctgcgctccag
tgtaaagtggctcagtctcccaccccgagtcctgctcctcagacctctactgctgcttct
gctgccctcactagggcgccgttggcagcggcggccgtggcggtgacggctccccagcag
gtccctgcagctatgggcccccaggggccccacggtcagcccacgctggcccctcccagc
gcagccggccccgcccctggagcgcctgtcatctcccaggaaatgcaggagaacgtgaaa
aagtgtaagaactttctggcaacgctaatcaaactggcgtcccataattccccctccccg
gagacgtcccggaacgtgaagtcgctggtgcaggacctgctggatgccaaaatcgagcca
gaggagttcactaaccgactgcaatctgagctaaaatcatcacctcagccttacctggtc
ccttttctaaagaaaagtctgccggccttgcggctgtctctgttgaacagccagcagtcc
ctcacccagcctgtacaacctgccaaaaccagcatcaccccaaccggagctgtcgccggg
accgctgccacgggcaacgctatacggcaacctaacagcacaactgtgctgccgcaaggc
attaaaagaccaggtgttgcagggcaagggcaaatccggatgcccgtagttgtcacacag
acagtgcggccagcaggtgctgtaggaaaagttcagccaatccagacgagtaaatgtccc
acagcgctccccgtccagctctcaggaacccagaagaacaaagtcaacgaccctggggga
ggctccttcagggatgacgacgacatcaacgatgtggcttctatggctggggtcaacctg
aatgaagagagtgcccgtatcttagcaaccaactcggagctggtgggaacgcagatcaga
tcgtgtaaagacgaggccttcctgcctacgggtctgctgcaccggcgcatcctggaaaca
gctaagaagtacggagtgacggaggtgcctctggaggcagtaaacttcatctcacacgcc
acgcagtcacggttacggacagtgctggagaaggtcacatccatcgcccagcacaggatg
gactccaacaaggatgaggagtggtatgagcagtcgtcggacgttcgctctcagctgaag
ttctttgagcagctggaacggctggagaaacagaggaaggacgagcaggagagggagatt
ctcctcaaagcagctaaaagtcgctcgaggcaggaggacccagagcaggctcgtttgaag
cagaaggcaaaagagatgcagcagcaggaactggctcaaatgagacagagagacgctaac
ctgacggctctggctgccatcggcccgcggaagaagcgcaaggtggactcaccgggggca
acaacgtcgggcactgaggtgtctggaagttctgcaggttctccagcttcttcgtccaca
gtttccacgtcctcacggcagtaccctcgccagcgaatcacacgcgtcaacctcagggac
ttcatcttttacatggagcaagaacgagagacgaacagatcgctcttactctaccgagct
ctgctgaagtag
DBGET
integrated database retrieval system
