Astyanax mexicanus (Mexican tetra): 103025539
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Entry
103025539 CDS
T05042
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103025539 (syde2)
Membrane trafficking [BR:
amex04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103025539 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
103025539
NCBI-ProteinID:
XP_015457751
Ensembl:
ENSAMXG00000004233
UniProt:
A0A8B9GYP1
LinkDB
All DBs
Position
13:complement(6860877..6923769)
Genome browser
AA seq
1610 aa
AA seq
DB search
MADPLRRSLLAKLRGKKSKKAAVANGTGGGERGGKFRAKVSPTATAGTATTAAAADSQSG
RAVAAVELDPTSSSRGGKQARCLNGGLDGGVVRLVTGLRDEQTGLGDSFRLWDQALRGRE
QLAGGDSIGFGNDSWDRSELKPEDRGTVKVPEAGCKDRGSSEDRVRALETRDWDGGVVLD
QGASSVSLRAGTGSAEAAEITCISSHLLHSSHSGSGLFHLLHTNVDDLDLIRSVESSFEG
DLRMPALQSPSFFPTELEIVDSSLTPRLVWDREGSNRPNSVDSEEDDYYDNEILPFYESE
GQNLGLNGGAGAPLHSFVQAGQETDSTEETDRLRNQLKEAYYLLINTMHDMAFDGPAQSS
RSGSSSQSRDSVRSTSSHSSTRLGDTYDDTCSSGEQSGQQACGSHWALLDLAETCRAKIE
GSRRRSLSMQCMPHESRRPAALRRSISDSGVQYCTIGPGQSHGQGTLETENTKASKHTEE
TASLHDQCPNNDPTDQRLEEPHIDSKNGSISDPLSVQNMLTACETVDLHKENLVTIETEA
SVSNTSSVDHSVSCLVSSPDASSQKPGPAVSQQLIQSVGKPPGVTVNKMQEWMHKGRVLS
SEMRQRIAGSSLRQAHCQDIHVWPKAPSHPAKPSCTGSSGGGPQPALMSSCSASCHESDP
RAAPLNSITVSKKRNWLHQSSPHPPHHPDNVPAPRTPDDDHLNHANMPHVTVSVSSPDTP
SPLLIDPVEENDADDEGEIWYNPIPEDEETDLPHCIPTATHPPLLLQAPPPPWTAGITRR
ASAGGEEGRAGEGGGPVGEAGKANVTHSCEQNHMNRQMCRPDVQENPPTRTAATESSEQS
ASGFSPPSSPNPTKKSSSINWSFHDRIKSPRTVRKLSMKMKKLPELSRKLSVKGNPTSSA
GTSSGQSEVRAAIGTAEQSTTPPGGVTTSSASGNVIWRYHLDSSVSTQQHSYSKKKSSGG
GVPKSASKGGYLSDGDSPELVAKSGKHGSSEGKSSRLCDKDTNAGAPKTDLDVDAFRPYN
FSEQPKCTAYISGLMSLHFYGAEGLKPPRADSRHVYCAIQVDSVNKARTALLTCRTAFLD
MDHTFNIELENAQHLKLALFSWEAVPRRNRVCCHGTVVLPPLFRTATRTHQLAVRLEPRG
IIYVKLGLMEQWKNSLRGPDSEREGEANVFGVEAARVVEREGAGLMVPLIIEKCITEIER
RGCQVVGLYRLCGSAAVKKELREAFERDSHAIELSESNYPDINVITGVLKDYLRELPFPL
ISKPLYEAVIDSMAKRPLLIGSGGCENDPAESEHTVSLLETLPEVEKMTLRKLLDHLKRV
ASHHEVNKMTCQNLAVCFGPVLLSQRQDASCHSNRVFVDSEELASALHFKKHIEVLHYLL
QLWPVVDAEGKPSSPALDSPPSAVTTAAAPVRRRKERPQVLNLAESDLAGVLRPRPGRLD
SPSNRYAGDWSDCRETYLQQSCSDEADYADVPGDELEERVMEAEEKALEQDDGELEEALE
SVEDTQAAFEEERESDEEQSEETVSISAPQQQQQQEDLEEPLLKPWGEQILLERDEHRPK
EHTYQAYMKIQEISPVLSNRVNLRDLQESIDTLIGNLERELNKNKISVGY
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctctgcggaggagtttgttagctaaactgagggggaagaagtcgaaaaaa
gcggcggtggcgaacggtaccggcggcggggagagaggcggtaagtttagggcaaaagtt
tcccctacggcgacggcagggacagcgacaacagcggcagcggcggactcgcagagtggc
cgagcggtcgcagcggtggagttggacccgacctcgagctccagaggaggtaagcaggct
cgctgtttgaacgggggtttggacggaggggtggttcgtttggtcacggggctccgagac
gagcagaccgggcttggagactcttttcgcctttgggaccaagcgctgcgtggccgggag
cagctggccggtggagactccataggctttggaaacgatagctgggaccgttctgagctt
aaaccagaggaccgaggcaccgtgaaagtgcccgaggctggttgcaaggacagagggagc
agtgaggacagagtacgggctttagagactcgagactgggacggaggagtggtgctggac
cagggagcgagttcagtcagcctcagagccggcacaggttcagcagaggcagcagagatc
acctgcatcagcagtcacctcctgcactcaagccactcaggttcaggcctttttcatctt
cttcacaccaacgtggatgaccttgacttgatccggagcgtggaaagttcttttgaagga
gatctgaggatgccagccctgcagagtccatccttcttccccactgagctggagatagtg
gactccagcctgacccctcggcttgtgtgggacagagaggggtcaaaccggcccaattct
gtggacagcgaggaggacgactactacgacaatgagattctgcctttctacgagtcagag
ggtcagaacctgggcttgaatggtggggctggggctccgctccattcttttgtccaggca
ggtcaggaaacagacagcacagaagaaacggacaggctgagaaatcagctaaaagaagcc
tactacctcctcataaacaccatgcatgacatggcctttgatgggccggcacagagtagc
aggagtgggagctccagccagtctcgggacagtgtgaggagcacctcttcacattcatca
actagactgggagacacatatgatgatacatgctcatctggtgagcaaagtgggcagcag
gcttgtgggtcacactgggccttgctggaccttgctgagacctgcagagccaaaattgaa
ggctctcggaggagaagcttaagcatgcagtgcatgccccatgaaagtcgcaggccagca
gcactgcggaggtccataagtgactcaggtgtacagtactgtacaataggaccaggtcaa
agtcacggtcagggaacgcttgagactgagaacactaaagcctctaaacacacagaggaa
actgcaagcctgcatgaccaatgccccaataatgacccaacagatcagagactagaagaa
ccgcatatagacagcaagaatggttccatttctgaccccttgtctgttcaaaacatgcta
actgcatgtgaaacagtagatttgcacaaggagaacctggtcaccattgaaactgaggct
tcagtttcaaacacaagctcggttgaccactctgttagctgcctggtcagttctccagat
gcctcttcccaaaagcccgggcccgctgtctcacagcagctgattcaaagtgtgggaaag
cccccaggagtgaccgtcaacaagatgcaggagtggatgcacaaaggccgcgtcctttca
tcagagatgcggcagagaattgctggatcctccctgcgccaggctcactgtcaggacatc
cacgtgtggcccaaggctcccagtcatccagctaaacccagctgcacaggctcctctgga
ggagggcctcagccagctctgatgtccagctgcagtgcctcatgccacgagtccgaccct
cgtgccgctcctctcaactccatcaccgtctccaagaagcgcaactggttgcaccagagc
tccccccaccccccacatcacccggacaacgtccccgcgcctcgtacaccggacgacgac
cacctaaaccacgcgaacatgcctcacgtcaccgtctccgtctcgtctccggacaccccg
tccccgctcctcatcgacccggtggaggagaacgacgccgacgacgagggagaaatctgg
tacaaccccatccctgaggacgaggagaccgaccttcctcactgcatccccacagccacc
cacccaccactactcttgcaggctccgcccccaccctggactgctggaatcaccagacgg
gccagtgcagggggtgaggaggggcgagcgggggaggggggcggtcctgttggagaggcg
ggaaaagcaaacgtcacacattcctgtgaacagaaccatatgaacagacagatgtgccgg
ccagatgtgcaggagaaccccccaacccggacagcagctacagaatcttctgaacaaagt
gcctcaggcttctctcctccctccagtcccaacccaaccaagaagagctcctccatcaac
tggtctttccacgaccggatcaaatctccacgcacagtccggaagctctccatgaagatg
aagaagcttcctgagctcagcaggaagctaagcgttaaagggaacccaaccagcagtgcc
ggaacctccagcggccagtctgaagtaagagctgcaatcggcacggcagagcagagcacg
accccgccgggtggcgtgaccacgtcatcagcgagcgggaacgtcatatggcgctaccat
ctcgacagcagcgtgtccacccagcagcacagctacagtaagaagaaaagcagcggaggt
ggggttcccaaatcggccagtaaaggggggtatcttagtgatggagactcgccggagctg
gtagccaaatcgggaaagcatgggtcatccgagggtaagtctagcaggctttgtgacaag
gataccaatgcaggagcaccgaagacagatctagacgtggacgcctttcggccatacaac
ttctcagagcagcccaagtgcacggcgtacatctcaggcctcatgagcctccacttctac
ggggctgaggggctaaaaccgccgcgggccgactcgcgccacgtctactgcgccatccag
gtggactctgtcaacaaggcccgcacggccctcctgacctgccgcacggccttcctggac
atggaccacaccttcaacatcgagctggagaatgcacagcatctcaagctggccctcttc
agctgggaggcggtgccacggcggaaccgcgtctgctgccacgggaccgtagtgctgccg
cccctgttccgcacggccacccgcacgcaccagctggccgtgcgcctggagcctcgcggg
atcatctacgtgaagctgggacttatggagcagtggaagaactctctgcgtgggccggac
agcgagagggagggcgaggccaacgtgttcggagtggaggcagctcgggtggtagagcga
gagggggcggggctgatggtgccactcatcatcgagaagtgcatcaccgagatcgagagg
cgaggatgccaggtggtcgggctgtatcgtctgtgtggatcagcggcggtgaaaaaggag
ctgagggaggcgttcgagagagacagccatgccatagagctgtcggagagcaactacccg
gacatcaacgtcatcacaggtgttctcaaagactatctgagagagctgccgtttcctctt
atctccaagcctctgtatgaagcagtgattgactccatggccaagcggccgctgcttatc
ggatccggcggctgcgagaacgatccggccgaatcggaacacacagtcagtctgctggaa
accctgcctgaggttgagaagatgactctgcggaagctcctagaccacctgaagcgcgtg
gcttctcatcacgaggtgaacaagatgacgtgccagaacctggcggtgtgtttcgggccg
gtcctgctcagccagagacaggacgcctcgtgccacagtaaccgagtgtttgtggactct
gaggagctggccagcgccctgcacttcaagaagcacatcgaggtcctgcactatctgctg
cagctctggccagttgtggatgcagaaggtaaaccctcgtctcctgccctggactcccct
ccttcagcagtgacgacggcggcggctccggtaaggaggagaaaggaacgtcctcaggtg
ctgaatctggctgaaagcgacctggcgggcgtcctgcgacctcgacccggacgactggac
agtccgagcaaccgctacgccggtgactggagtgactgcagagagacgtacctccagcag
tcctgctcggatgaggccgactacgccgacgttcccggggatgaacttgaggaaagagtg
atggaggctgaggaaaaagccttagaacaggatgacggagagttggaagaagcactggag
agtgtggaggacactcaggcggcctttgaggaggagcgagagagcgatgaagagcagagt
gaggaaaccgttagcattagcgctcctcaacagcagcagcagcaggaggatttggaagag
ccgctgttgaagccctggggcgagcagatccttttggagagagacgagcacagacccaaa
gagcacacctaccaggcctacatgaagatccaggagatcagccctgtgctcagtaaccgg
gtgaacctgcgcgacctgcaggagagcatcgacacgctgatcgggaacctggagcgggag
ctaaacaaaaacaagattagcgtgggctactga
DBGET
integrated database retrieval system
