Astyanax mexicanus (Mexican tetra): 103025748
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Entry
103025748 CDS
T05042
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex00514
Other types of O-glycan biosynthesis
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103025748 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103025748 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amex01003
]
103025748 (colgalt1b)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
103025748 (colgalt1b)
Glycosyltransferases [BR:
amex01003
]
O-Glycan biosynthesis
O-linked Gal type
103025748 (colgalt1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
DUF6492
PAPS_reduct
Motif
Other DBs
NCBI-GeneID:
103025748
NCBI-ProteinID:
XP_049325599
Ensembl:
ENSAMXG00000001356
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Position
21:complement(39918968..39948848)
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AA seq
608 aa
AA seq
DB search
MRRLSALPLVASCLLLAGLSRAYFPEERWSPESPLLAPRLLAALVCRNSEHSLPHVLGAI
DRLNYPKDRMALWVATDHNSDNTTAMLREWLIKVQNLYHYVEWRPEEESSEFEEEAGPKH
WTNQRYEHVMKLRQAALETAREMWADYFLVMDCDNLLTNPDVLWKLMKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTVAYMPIRRQERKGCFPVPMVHSTFLIDLRKQASSELAFYP
PHPDYSWAFDDIIIFAFSARMADVQMYVCNKETYGYFPVPLRSQNSLRDEADSFLHSVLE
VMVRGPPLQPSVHLSLPVKQSDKLSFDEVFMINLQRRPDRRERMLRTLWEQEISCKIINA
VDGKALNESHVRRMGITMLPGYSDPYHGRPLTKGELGCFLSHYNIWNEIVERDLKVSLVI
EDDLRFEIFFKRRLQNLMQEIKAQKLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSY
WTLGYMISLQGAKKLLRAEPLKKMLPVDEFLPVMYNKHPVKDYMTPFEPRDLRAFSAEPL
LVFPTHYTGDPGYISDTETSTVWNNETVRTDWDRARSRKTLEQEELSSEAQNSDVLQSAL
DSTARDEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcgccggctttccgcgctccctctggtcgcctcttgcctgcttctggccggcctgagc
cgagcctacttcccggaggagcgctggagccccgagtccccgctactcgccccgcggttg
ctggcggcgttggtctgccgcaactcggagcactccctgccgcatgtgctgggagccatc
gaccgcctcaactacccgaaggaccggatggccctctgggtggcgaccgaccataactct
gacaacaccacggcgatgctgcgggagtggctgataaaggtgcagaacctgtaccactat
gtggagtggaggccagaggaggagtccagtgagtttgaagaggaggcgggaccaaagcac
tggacgaatcagcgttatgaacatgtgatgaagttacggcaggcggcgctggaaaccgca
cgggagatgtgggccgactatttcctggtgatggactgtgataatttgctgactaatcct
gatgttctgtggaagttaatgaaggaaaataaaaccattgtagccccgatgttggagtcc
agagccgcctactccaacttctggtgcggcatgacctcccagggctactataagcgcact
gtggcgtacatgcccatccggaggcaggagaggaagggctgttttccggttccgatggtt
cactccaccttcttgatagacctgagaaagcaggcgtccagcgaactggccttctaccca
cctcacccggactacagctgggccttcgacgacatcatcatcttcgccttctccgcccgc
atggcagatgttcaaatgtacgtgtgtaataaagagacgtatgggtattttcctgttcct
ctccgatcccagaattccctgcgggacgaggcggacagcttcctccactctgtgctggag
gtcatggtgcgtggtcctccattgcagccctcggtgcatctctcgcttcctgttaaacag
tcggataagttaagttttgatgaggtgtttatgataaatctgcagaggcgtccggaccgt
agggagaggatgttgaggactctgtgggagcaggagatcagctgtaagatcataaacgcc
gtggacggaaaagcgctgaatgagagtcacgtccgaaggatgggtattaccatgttgccg
ggatacagcgacccgtaccacggccgcccgctaactaaaggagagctgggctgcttcctg
tcccactacaacatctggaacgagatagtggagcgagatctgaaggtgtctctggtgatc
gaggatgatcttcgctttgagattttcttcaaaagacgacttcagaacctgatgcaggag
attaaagcgcagaaactggactgggacttaatttatatcggaaggaagaggatgcaggtg
gaccatccggagaaatccgtgcccaacatccacaacctggtggaagcggactattcctat
tggacgctgggctacatgatctcgttacaaggcgctaagaagctgctgagggcggagcct
ctgaagaagatgcttcctgtcgacgagttcctgcctgtgatgtacaacaagcatccagtg
aaggactacatgactccgttcgagcctagagatctgcgggcgttttcggccgagcccctg
ctggtgttcccgacgcactacaccggagaccccggctacatcagcgacaccgagacgtcc
acggtgtggaataatgagacggtgcggaccgactgggaccgggcccggtcccgcaaaacc
ctggagcaggaggagctcagctccgaggcccagaactccgacgtcctgcagtcggctctg
gacagcacggcccgggacgagctctga
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