Astyanax mexicanus (Mexican tetra): 103025794
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Entry
103025794 CDS
T05042
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103025794 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103025794 (usp42)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103025794 (usp42)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103025794 (usp42)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103025794 (usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103025794
NCBI-ProteinID:
XP_007251225
LinkDB
All DBs
Position
15:25246757..25258175
Genome browser
AA seq
1217 aa
AA seq
DB search
MTIVDKSSEKSDLESVRCKHSSSMTPFSTGDMDGSSSSWSVGSSATELSRAKTACVAPSI
GAAVYASDTGHPTERPKEHVVITCGDGIALPQRVLFPAERLCLKWNQVHRIGAGLQNLGN
TCFLNSALQCLTYTAPLANYMLSREHSKTCHEPGFCMLCTMQNHITQVFANSGNVIKPIG
VLNELKRIAKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATTLIHQIFGGYLR
SRVKCLNCKAVSDTFDPYLDIALDIKTAQTITKALEQFVKPEQLDGDNAYKCTKCKKMVQ
ASKRFTIHRSSNVLTISLKRFANFNGGKIAKDVRYPEYLDMRPFMSQSHGEPQVYGLYAV
LVHSGFSCHAGHYYCYVKASNGQWYQMNDASVSVSDIRSVLNQQAYLLFYVRSTDLKNGS
DFNHMNRTPGQSSPRPVVTSKMNGPQYTSSSFIGPQLPPHMLKQNSSYVNGNGSSKEYAC
GSKPSSSFSSSMTKTGSSLSFPSSSSSSSSTSSSSTSHQLVHPSSILEPQKRPRLTFLIG
QGKTVRPSQTQPSPSSSSTSSASHAQPQPSSSSSSQSTSDLQSPVQVNGTSTGHSGAAFL
VPYGQESSEESDQEGGVWENGITTPYSVSKAANGKNGVDGVYSHSSSSSVAPKTNSSNSF
SATHARENGSGHAHNAQNGHHKVNGFKHADKAMGNGASASSMVSPSNSLDNSKQTSRVVT
CSKPVCTNGPLLPAPNTERTQTTPQPVSVTQNAPNLPSTSPPGAESAVEMLDKPCEETSA
AQVDSTDRVKTELVLGNCIPAVNITPEPTQANGSSLNLRLIDGHDTPNGPKASPEASRHS
GGVDKEETKGSPSEKPGSREEKRLAEGRERDLDRSHASAATKDRDRDKERHRHYREQEDK
SRERYGHSHRLDRDYCPPSRERHYRDRSVDRHWDRHAYYRRDNYYHKRGREERNWERDRR
YQPSAYDGYSRSTFHHYRDGSSSHWRRVMENGRDRWHHNAVESSSRAKFSPQRSVSPASR
PLSRKRSLSVDDEVSEEHRAKKHKKSKKKKNKDKHRTSERDVADRNGDSNSSRHKKKKKK
KKRRHDEEERRHAESRDSHSSEENEWKPRSAEERGNRKHHRSSDREESPLTINQDQTEDH
ARLNGHSDSGISPCNGSVHGFCHNGTDEQVKYRHLIHTSFNSREQTGSCGGENGDTGTVC
HTAVASADTWNTTNTNL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaatcttcagagaagtctgaccttgagtcagtacggtgcaagcac
tcaagctccatgactcctttctccactggagacatggatggaagcagttccagctggagt
gtgggctcttcagccacagagctctcaagggccaagactgcctgtgtggctcccagcatt
ggagcagctgtgtacgccagcgacacaggacacccaacagagaggcccaaggaacatgtg
gtgataacttgtggggacggcattgctctgccccagagggtcctgtttccagccgagcgt
ctgtgcttgaagtggaaccaagtccatcgtattggagcaggtctccagaacctgggcaac
acatgttttcttaactctgctcttcagtgtcttacatacactgctccacttgcaaactac
atgctgtccagagagcattccaaaacatgtcacgaacctgggttttgcatgttgtgtaca
atgcagaaccacatcacccaggtgtttgccaattcgggcaatgtcattaagcccattggt
gttttgaatgaacttaaacggattgcaaagcattttcgttttggaagtcaggaagatgca
catgaattcttgcggtacacagtggatgctatgcaaaagtcctgcctgcctggaaataaa
ctggacaggcaaacacaggcaaccactcttatccatcagatatttggaggctatctgagg
tctagggtgaagtgtctaaattgcaaagcagtgtctgacacatttgatccgtatctggat
attgcactggacattaagacggcccagactattaccaaagctcttgagcagtttgttaag
cctgagcaacttgatggagacaatgcctacaagtgtaccaaatgtaagaaaatggttcag
gcctcgaaaaggtttaccattcaccgcagttcaaacgtgctcaccatctccctcaagcgc
tttgccaacttcaatggaggcaaaattgctaaggatgtgagataccccgagtaccttgac
atgcgaccgttcatgtctcagtctcatggagagccacaagtatacggactgtatgctgta
ctagtgcactctggttttagctgccacgctggacactactactgctatgtgaaggctagt
aacgggcagtggtatcaaatgaatgatgcatcagtgtctgtcagtgacataagatcagtc
ctgaatcaacaagcatacctgctcttctacgttaggtcaacagatctgaagaatggttca
gattttaaccacatgaatcgtactcctggccagtcatcccctcgcccagttgttacttct
aaaatgaatggtcctcagtatacctcctcatccttcattggaccacagcttcctcctcac
atgttaaagcagaatagctcatatgtgaatggaaacggctcttcgaaggagtacgcctgt
ggttcaaagcccagcagcagtttcagcagcagcatgaccaaaacaggctccagtctgtct
ttcccttcttcttcctcttcttcgtcatcaacctcctcttcttccacgtctcaccaactt
gtccacccctcaagcattcttgagccacagaagaggcctaggttgacctttctcattggc
cagggaaagactgtgcgtcccagccagacccagccaagccctagctcttcttcgacctct
tcggcctctcacgctcagccacagccctcatcgtcttcatcttcacagtctacctcagac
ctccagagccctgtgcaggttaatggtacatctactggccacagcggagcggctttcctg
gttccttacggtcaggagtcgtccgaggagtctgaccaggaagggggagtttgggagaat
ggtataactacgccttatagcgttagcaaggcagccaatgggaaaaatggggtggatggt
gtctactcccatagtagttccagctcagttgcccctaagactaacagctctaacagcttc
tctgcaacacacgcacgtgagaatggatcaggacatgctcacaatgctcagaatggccat
cacaaagttaatggcttcaagcatgctgataaggctatgggaaatggagcttctgcatct
tctatggtcagcccctcaaacagtttggacaactccaagcaaacttctagagttgtgaca
tgctccaagcctgtgtgcactaatggccccctcctgccagcaccaaacacagaaaggacc
cagactacaccacagcctgtatctgttactcagaatgctcccaatctgccatccacatct
ccacctggtgcagaatcagctgtggagatgctggataagccatgtgaggagacatcagcc
gctcaggtggactcaacagacagagttaagacggagttggttctaggtaattgcatccct
gcagttaacatcactccagaacccactcaggctaatgggtccagtctcaacctgcgatta
attgatggacatgatactccaaacgggccaaaggcatccccagaggcatctaggcacagt
gggggtgtcgacaaagaagaaacgaaaggctctccgtctgagaagcctggatctcgggaa
gaaaagagactagcagaaggccgagaacgggatttggaccggtctcatgcttctgctgcc
acaaaggaccgagatcgagacaaggaaaggcacagacattacagagagcaagaagacaaa
agcagagagaggtatggacacagccatcgactggacagagattattgtccgcccagtcga
gaaaggcactacagagaccgatcagtagatagacattgggacagacatgcttactaccgt
cgagacaattactaccacaaaagaggcagggaagagcgcaactgggagcgagacaggaga
taccaacccagtgcttacgacggctactcgcgttcgactttccaccactatcgggacgga
agctccagccactggcggcgtgtgatggaaaacggccgtgacaggtggcaccacaatgca
gtggagagcagctctagagcaaagttctcaccccagcgctccgtcagccctgcatccaga
cccttgtctagaaagcgcagcctgtctgttgatgatgaggtttctgaggagcacagggct
aagaaacacaagaaatcaaagaaaaagaagaacaaagacaagcacaggacttctgaaagg
gatgtggctgacaggaacggggacagcaactcctcgcgccacaaaaagaaaaagaagaaa
aagaagaggaggcatgatgaggaggagaggaggcatgcggagagccgtgactcccacagt
tcagaagaaaacgaatggaagcctcggagcgccgaggagagagggaaccgcaagcaccac
cgcagctctgacagggaggagtctcccctcaccattaatcaagatcaaactgaggaccat
gcgcgactcaatggtcactcagatagtggcataagcccttgcaatggaagtgttcatgga
ttctgtcataatggcacggatgagcaagtgaaatacagacacttgattcacacttccttt
aacagcagagagcagacaggctcatgtggaggagaaaatggagacacaggcactgtgtgc
catacagctgttgcctctgcagatacttggaacaccacgaacacaaacttgtga
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integrated database retrieval system
