Astyanax mexicanus (Mexican tetra): 103025828
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Entry
103025828 CDS
T05042
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103025828 (six2a)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
103025828 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
103025828
NCBI-ProteinID:
XP_007255835
Ensembl:
ENSAMXG00000037922
UniProt:
A0A8B9LIZ5
A0A3B1JGZ8
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All DBs
Position
7:21822278..21825282
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AA seq
288 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNSHNPLATSMNGNKTLLGSSDDDKTPSGTPDHTSSSPALLLTSGP
GLQSLHGLAPPPAPSAVPVASADSVHHHHTLHDTILNPMSSNLVDLGS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttgccgaccttcggcttcacgcaggagcaagtggcgtgtgtgtgcgaggtg
ctccagcaggggggcaacatcgagcgcctgggtcgttttctttggtcgctgccggcttgc
gagcacctccacaaaaatgagtcggtgctcaaggctaaggctgtggtggcctttcaccgt
ggcaactttagggaactttacaagatcctggagagccaccagttctcgccgcacaaccac
cccaagctgcagcaactgtggctcaaagcgcactacatcgaggcggagaagcttaggggg
cggccgctcggcgccgtgggcaagtatcgcgtgcgcaggaagtttccgctaccacgctcc
atctgggacggcgaggagacgagctactgcttcaaggagaagagccgtagcgtgctgagg
gagtggtatacgcacaacccgtacccgtccccgcgcgagaagcgcgagcttgccgaggcc
acggggctcaccactacgcaggtcagcaactggttcaagaaccgaaggcaacgcgaccgg
gcggccgaggccaaagaaagggagaataacgagaactccaatacgaacagccacaacccg
ctggccacgtcaatgaatggaaataagactcttttggggagctcagacgacgacaaaact
ccatctggcacaccggatcatacgtcgtccagccccgcgttgctgcttacgtccggccct
ggtctacagtctctgcacggcctggcgcctccacctgcgcccagcgcggttcccgtggcc
agcgcggattccgtgcaccatcaccacaccttacacgacaccatactgaaccccatgtcg
tcaaacttggtcgatcttggttcttaa
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