Astyanax mexicanus (Mexican tetra): 103025838
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Entry
103025838 CDS
T05042
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103025838 (sbno2a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103025838 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
103025838
NCBI-ProteinID:
XP_007236009
Ensembl:
ENSAMXG00000018868
UniProt:
A0A8B9HDA7
LinkDB
All DBs
Position
4:complement(48922220..48959099)
Genome browser
AA seq
1663 aa
AA seq
DB search
MSILATSAVMDTEDFLHSEGPQLGSPKYSVPSPPLSSSIESQLFSANLWQSFSQQPQYNQ
HYPMQQSGRSCQPSSTSVDMFSDMDFSDLTSGRNEDFSADPSFIDELSNTSLFSSPADSL
SEYTDPAGFDSLTHITSQGSSSTPAMWGTPGHSQRELVPSVPHLNKFPGLNNLDDIILSN
QPLGGYKQPEVVQPPPEEEEDADEEETEELGHMDTYAEYKPSKSTIGISHPDIVVETSTL
SSVPPPDVTYTLSIPDSTIQNGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVG
KGRTVAGIILENYLKGRKRALWFSVSNDLKYDAERDLRDIEAPNIPVFALNKIKYGDTAT
SEGVLFATYSALIGESQAGGQHRTRLKQILDWCKPEFDGVIVFDECHKAKNATSTKMGKA
VLDLQNKLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFEDFLHAIEKRGVGAM
EIVAMDMKVSGMYIARQLSFSGVSFRIEEITLDEEFKVVYNKAARLWAEALELFTRAADL
LALASRKSLWGQFWSSHQRFFKYLCIAAKVRRLVELAQAEMERGKCIVIGLQSTGEARTR
EVLDENDGHLDRFVSAAEGVFQSLVQKHFPLEKPKKEKTAGNKRKRKPRGRPPKFPKPCM
EEGGVIKISDDSDLDSEDIDSDSNSSPESLLDNDDVIFVNHINGPTAKLEELKQGLLSKI
AELGKELPLNTLDELIDRFGGPERVSEMTGRKGRVVRRPDGRVQYESRAEQGLTIDHVNV
KEKERFMVGEKLVAIISEAASSGISLQADKRVQNQRRRVHMTLELPWSADRAIQQFGRTH
RSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYG
TKALDKITKAILGHIENKVPAPKGYPGGEARFFADMKKGMIDVGIFCREPRFGLNTEKDC
TITKFLNRILGLEVHQQNSLFQYFTDNFDYLIDKDKKEGRYDMGILDLAPGNDEIYEEEQ
EVYLTPGNPQEGQVTLYKISVDRGMPWDEACKKAETLTKEHEGFYLSHKLRGSQPCVLLA
EQGRGRNLNVYKPNIGRQAHPENLDNLQMRYRKVTPEEAKDTWENQFVFSFKKCSHANWK
GKCKQVEQGQECWLGMRLRQYHMLCGALLRVWKRVADVISDVTNSSILQIVRLKTKQNSK
QVGIKIPENCVERVRSELSQMDSEVKRARKEKQLAKEKRIQEQRARQFLLEHQKRLLTCI
NPHNPPPYPGIHPGQTIAPKNKAVEEVLDLTLSPCPSPEPKANGSKLGSVLNGTVGINGG
FGRQRGGGGGSGGLKIPETFHLEELISQERQRDMQPPLQRGMTNVHPSPSLSHNGFLALK
QQLKNNSQTVHTLKQQHTALGVLQQSRAQTSSVFSSPQVSSQIAARVAEILRLQNNGNKP
LVQLKPNANTLTNHTAPTIPRHQLRTDSMPRVSHSLFSTPLQQGSHQHTSMHTHPSSLRT
HMLERQMTANKHTPLSHKPCQQPQQAISSQSVLENSAASQDEFDFDLPVHAPVQPPPYTF
SSPAPQAPPSSSSSQSFSCSSPSSLSLFSSALPSSSLSDSISSSSLFAPSSEHPSHQLAN
GHCSMDADLDALNAHEELDLMTCGTSSDHRQSVIQYKPPDWDS
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcttgccacatctgctgtcatggacacggaggacttcctgcactcggagggt
cctcagctggggagtcccaaatacagtgtgcccagtcctccactctccagctccattgag
agtcagctgttttctgctaacttgtggcagtcattctcccagcagcctcagtataaccag
cactatcctatgcaacaatctgggagatcgtgccagcctagctctacatctgtggatatg
ttcagtgacatggatttctccgaccttacatcaggcaggaatgaagacttttcagcggat
ccatcctttatagatgaattgtccaacacgtctctgttctcctctcccgcggattctctg
tctgagtatactgatcctgccggtttcgacagcctgacccacataaccagtcagggctct
tcctcaacgccagcaatgtggggaacacctgggcacagtcagagagagttggtcccatca
gttcctcacttgaacaagtttccaggtttgaacaatctggacgatatcatcctgagcaac
cagcctttgggaggatataagcaacctgaggtcgttcagcctccacctgaggaggaagag
gatgcagatgaggaagagacggaagaacttgggcacatggacacatatgctgagtacaag
ccatccaaatcaaccatcggaatctctcacccagacattgtggtagagaccagcactctc
tccagcgtccctcctccagatgtcacatacactctttccatcccagacagcactatccaa
aatggtctactgtctgccctacagcttgaggccatcatatatgcctgccagcaacatgag
gtgatcctgcagaacaaccagagggcaggctttctgattggggatggagctggtgtaggg
aagggccgcactgtcgccggtatcatactggagaactacttaaagggaagaaagagagcc
ctatggttcagtgtgtctaatgacctaaagtatgatgcggaaagagacctcagggacata
gaggcccccaatattcctgtttttgctttaaacaagattaaatatggagacacagctacc
tcagagggtgtcctgtttgccacatattcagctctgattggagagagtcaggcaggaggg
cagcaccgcaccagactcaagcagatactggactggtgtaaacctgaatttgatggagtt
attgtgttcgatgaatgccataaagccaaaaatgcaacgtcaaccaagatgggcaaagct
gtattggaccttcagaacaagttgcccttggccagagtggtttatgctagtgccacaggt
gcctctgagccaaagaacatgatctatatgagtcggctgggaatttggggagagggaaca
cccttcaagacatttgaggacttcctgcatgccattgagaagaggggcgttggtgcaatg
gagatagttgccatggatatgaaagtcagtggcatgtacatagctcggcagcttagcttt
tctggcgtctcgttccggatcgaggaaattacactggatgaagagttcaaggtggtctac
aacaaggctgcccgcctgtgggccgaggctctggagctcttcaccagggcagcggacctg
ctggcactggcatcacgcaaatctctctggggacagttctggtcctctcatcagcgcttt
ttcaaatacctctgcatcgccgccaaagtgcgccgcctggtggaactcgctcaggctgaa
atggaacggggaaagtgcattgtaattgggctgcagtctactggtgaggcccgaacccga
gaggttctggatgagaatgatgggcatctggaccgattcgtctctgcagctgagggtgtg
ttccagtctctggttcagaagcactttccattagagaagccgaaaaaagagaagactgca
gggaataaaaggaaacgaaagcccagaggtcggccacccaaatttccgaagccatgtatg
gaggagggaggggttattaagatcagtgatgactctgatttggactcggaggacattgac
agtgactcaaactcttccccggagtcactgctggacaacgacgatgttatctttgtcaac
cacatcaatgggcctactgcaaaactggaagagctgaagcaaggtctgctgagtaagata
gcagagctgggaaaggagcttcctcttaacacactggatgaactgatcgatagattcggt
gggccagagagagtgtctgagatgactggccgtaagggtcgagtagtgcgaaggccagat
ggtagagtgcagtatgaatcacgggcggaacaggggctcaccattgaccacgttaacgtc
aaagaaaaggagcgcttcatggtaggagagaagctggtagcaatcatctcagaagcagca
agttcagggatctctctgcaggcagataaacgagtgcagaatcagaggaggagggtgcac
atgaccctggaactgccttggagtgctgaccgtgccattcagcagtttggtcgcactcat
cgttctaatcaggtgaccgctccagaatacatattcctgatctcggagctggcgggggag
aggcgtttcgcatccattgtggcaaagcgcctggagagcttgggtgccctgacacacgga
gacagacgagccacagagtccagagacctcagcaaatacaactttgagaacaaatatggc
accaaagctttggacaagattactaaagccatattgggtcacatagaaaacaaagtccct
gcacctaaaggatatccagggggtgaagcaaggttcttcgcagatatgaaaaaaggcatg
attgatgtgggtattttctgtagggagcctcgctttggactcaacacagagaaagactgc
acgatcaccaagttcctgaaccggattttagggctggaggtgcaccagcagaactcactc
ttccagtacttcacggacaactttgattacttgattgataaagacaagaaagaagggaga
tatgacatgggcatccttgatttggctccaggtaatgatgaaatctacgaggaagaacag
gaagtgtatctgacccctggaaacccccaggaaggccaggtcactctttataagatcagt
gtagatcgggggatgccctgggatgaggcctgcaagaaagcagaaacactgacaaaggaa
catgagggattctacctctctcacaagctacgagggagccagccctgtgtgctgttggca
gagcaaggtcgaggccgaaatctcaatgtgtacaagcccaacatcggcagacaggcacat
ccagagaacctggacaacttgcagatgcgctaccgcaaggtgacaccggaggaagcaaag
gatacctgggagaatcaatttgtcttttctttcaagaagtgcagccatgctaactggaaa
ggcaagtgtaagcaggtggaacagggacaggagtgctggctgggcatgcgtctgcggcag
tatcacatgctgtgtggagctttgctgagagtgtggaagcgagtcgctgatgtcatctct
gatgttacgaactcaagcatcctgcagattgtgcgcctcaaaaccaaacagaacagcaag
caagttggtataaagattccagagaactgtgtggaacgcgtccgcagcgagctctcgcag
atggactcagaggtgaagcgagctcggaaagagaagcagcttgcgaaggagaagcgcata
caggagcagcgcgcccgtcagttccttctggagcaccagaagcgactgctcacctgcatc
aacccccataaccctccaccctacccaggcatccacccaggccagaccatagcaccaaag
aacaaggctgtggaagaggtactggacctcacactcagtccctgcccttcccctgaaccc
aaagccaatgggtccaaattaggatcagttctgaatggaacagttgggataaacggtggc
tttgggaggcaaagaggtggaggaggaggttcaggaggactgaagattcctgagacgttt
cacctggaagaactgatctcgcaggagcgacaaagggacatgcagcctcctttacagcgc
ggcatgaccaacgtccatccgagcccctcgctgtcccacaacggttttctcgctctcaaa
cagcagctaaagaacaactcgcagaccgtccacacactgaaacagcagcacactgcgctg
ggggttctccagcagagtagagcacaaacatccagcgtgttcagttctccgcaggtttcc
agtcagatagcagctcgggtggcggagatcctgcgacttcagaacaacggaaacaagcca
cttgtacagctaaagcctaatgctaacacgttaaccaaccacactgcaccaacaataccc
agacaccagctgcgtacggattccatgccacgtgtatctcactcgctgttctccactcct
ttacagcagggtagtcatcaacacacatccatgcacacacacccatccagcttacgcact
cacatgctcgaaagacagatgactgcaaacaaacacacaccgctgtcacacaaaccgtgt
cagcagccacagcaggcgatcagcagtcagtcagttctagaaaattctgcagcttcacag
gacgaatttgacttcgatttgcctgttcacgctcctgttcaaccccctccgtatacattc
tcctctccagcacctcaagccccaccctcctcgtcttcgtcgcagtccttctcctgctct
tcccctagctcgctgtccctgttctcctcagccctcccgtcgtcttctctgtcagactcc
atctcctcttcctccctctttgcgccctcatctgaacacccctcccatcagttagccaac
ggccactgcagcatggacgcagacctggacgctctgaatgcccacgaggagctggacctc
atgacctgtggaacatcctcagatcatcgccagtccgttattcagtacaaacctccggac
tgggacagctag
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integrated database retrieval system
