Astyanax mexicanus (Mexican tetra): 103025876
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Entry
103025876 CDS
T05042
Symbol
atxn7l1
Name
(RefSeq) ataxin-7-like protein 1
KO
K11318
ataxin-7
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103025876 (atxn7l1)
03036 Chromosome and associated proteins [BR:
amex03036
]
103025876 (atxn7l1)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103025876 (atxn7l1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103025876 (atxn7l1)
SAGA complex
103025876 (atxn7l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
Motif
Other DBs
NCBI-GeneID:
103025876
NCBI-ProteinID:
XP_049330931
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All DBs
Position
2:384162..410642
Genome browser
AA seq
670 aa
AA seq
DB search
MHSKNNQRRQGSLGGSGAPLVQMKGKVSQAEVEPLQFRVPREFPHSRFSRAPLAVYPPKG
GRTKACVSLPVVSLEKMPCFTRSEGAPVKVTSTTSTLSVPSSTSSSVSSSTTSSPLKPAL
TSPASQKNQEKLLNGRGPVTPRSTTPPQLIDRRPSPSRSPLDKHTTQSPSPSPSPSSSSH
KPSSSPSPSTPDRRPGVPPSPSDRKQPNGAKASRHRKVSAQLQPVHQRKGRVFDPNKHCG
VLDPESQRPCTRSLTCKTHSLAHRRAVPGRKRVFDILLAEHKGRANEKEAGQKKETASGQ
SAQCTSSPDTSSSLSTGCNNGKATPTLKLRLANAHTHRGSGGGGAVVLSSTPVPVPAPDP
VLPGWLKLGGDAPVSSDEGEAELPEEKPAYYHTPSHPQPISWCGFSTRLMGRGHFVFDRR
WDRMRLALHCMVEKHVNAQMWRKVPLVADCVVSSSPLRYPASPTPALPHGLDGVSVVSYS
TPFSHNGTGVFCIRDPDPGPAPRLPQTKAAKPARTGLGEGVAAKRRKPPPTSDTTAAYRK
NGNGGYHPPPGPAHISNGAAALSVRAKPRSGDSDRYSGAELPLPPALTGDHGNVSSLSPL
PCGPAHSRKRRTSGPGDRPAKISRTTGLAGIFRKNSAALLSSSTSSTSTSSSTPETTSHN
SLSRAPKVHH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcaaaaacaaccagaggagacagggttctctgggtggttctggagctcctctg
gttcagatgaagggtaaagtgtctcaggctgaggtggagccgctgcagttccgagtgccg
cgagagttcccgcactcgcgcttcagcagagcgccgctcgccgtctacccgcctaaagga
ggacgaaccaaagcctgtgtttccttgccggtggtgagtctggaaaagatgccgtgtttc
accagatcagaaggagcacccgttaaagtcacctccaccacctccaccctttctgttccc
tcctccacttcttcctctgtgtcttcctccacaacctcctcccccctcaaacctgctctc
acatcaccggcatcccagaagaaccaggagaagctgctgaacggccgcggccccgtcacc
ccgcgctccaccaccccccctcagcttatagacagaagacccagcccctcccggtccccc
ctcgacaaacacaccacccaatcaccatcaccgtcaccatcaccatcatcttcatcacac
aaacccagctcctctccatctccttccaccccagacagaagacccggagtccccccctcc
ccctcagacaggaaacaaccaaatggagccaaagccagccggcataggaaagtatcagcc
cagctccaacccgtccaccaaaggaaaggaagagtcttcgacccgaataaacactgtgga
gttttggaccctgagagccagcggccctgtacccgctctctaacctgcaagactcactct
ctggctcatcggcgggcggtaccggggaggaagagggtgttcgatatcctgctggcggag
cataaggggcgggctaatgagaaggaggcggggcagaagaaggaaacagcgagcggccaa
tcagctcagtgcacgtcatcacctgacacctcgtccagcctatccaccggctgtaataac
ggcaaggccacgcccactctcaaactgcgactggccaacgcgcacacacacaggggttct
ggtggcgggggtgcggtggtgctcagctctacaccagtgccggtgccagcgcccgacccg
gttctgcccggctggctgaagttgggtggagacgctcctgtatccagtgatgaaggagaa
gctgagcttcctgaggagaaacctgcctattatcacaccccctcccacccccaaccaatc
agttggtgtgggttcagtactcggctgatgggacgaggacacttcgtgtttgaccggcgg
tgggacaggatgaggctcgcgctgcactgcatggtggagaaacacgtcaacgcccagatg
tggaggaaagtccccctggtggccgactgtgtggtcagctcgtcccccctgcgatacccc
gccagccccacccctgccctcccccacggactggacggggtttccgtggtgtcgtactca
acccccttctctcacaacgggacgggggtgttctgcatccgggacccagaccccggcccc
gcccccaggctccctcagactaaagcagctaaaccggcgagaaccggtttaggagagggg
gtggcggctaaaagacggaagccgcctcccacctccgacaccaccgcagcgtatcgtaag
aacgggaacggcggctaccacccgcccccaggccccgcccacatcagtaacggggcggcg
gccctgagcgtacgggctaagccccggtcgggggactcggaccggtactcgggcgcggag
ctgcccctccccccggcgctgaccggggaccacggcaacgtctcgtccctcagcccgctg
ccctgcggccccgcccactcacgcaaacgcaggacctcgggccccggggaccggcccgcc
aagatctccaggaccacaggactcgccgggatcttcagaaagaacagcgccgccctgctg
tcctcctccacctcctccacctccacttcctcctccacgcccgagacaacgtctcacaac
tccctctccagagcgcctaaagtgcatcactga
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