Astyanax mexicanus (Mexican tetra): 103026048
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Entry
103026048 CDS
T05042
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amex00535
]
103026048 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
amex00537
]
103026048 (gpc6a)
Proteoglycans [BR:
amex00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
103026048 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
amex00537
]
Others
103026048 (gpc6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
MRP-S23
DUF5856
Motif
Other DBs
NCBI-GeneID:
103026048
NCBI-ProteinID:
XP_022530639
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Position
21:complement(15505485..15647428)
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AA seq
564 aa
AA seq
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MQVSVLLCVGVCVVSVCAEGKWRSCGEVREAYSALGFSLNTAPQHEIAGEHLRVCARGQT
CCSSEMEDKLGVQSKVKLEGMVEESSDVLRSTFFSRHKKFDEFFLELLDNSEKSLNDMFV
RTYGKLYTHNSEIFEDLFSELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQYTFTDD
YLECISKYTDQLKPFGDIPRKLKAQVTRAFIAARTFVQGLMVGREVANRVSKVNVSPGCS
KALTRMLYCPYCGGLPGLRPCGNYCQNVMKGCLANQADLDPEWNLFIDAMLLVAERLEGP
FNIEAVMEPIDVKISEAIMTMQDNSMQVSAKVFQGCGHPKPAGLSRTSRGISEKGFNTRF
RPYSPEERPTTAAGTSLDRLRNVWRTMQNSVIDIKETLKKSKKFWSTLPDAVCSRERVSD
DDEQCWNSHAKGRYFPEVVKDGLTGQLNNPEVEVDITRPDTFIRQQIMALRVMTNKLRNA
YNGNDIYFQDSSDEGSGSGSGSGCTEGCTTEYDFVATEAPVVEADRSDPRPATDNAGLRG
HAPPPPCQLAAIAGILLLLLWQWR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgtcggtgctgctgtgtgtgggtgtgtgtgtggtgagtgtgtgtgcggagggc
aagtggaggagctgcggggaggtgcgcgaggcttacagcgcgctgggcttcagcctgaac
accgcaccacagcacgagatcgcaggtgagcacctgcgagtttgtgctcggggacaaacc
tgctgcagctcagagatggaggataagctgggggtgcagagtaaggtgaagctggagggg
atggtggaggagtccagtgacgtcctgcgctccaccttcttctccaggcacaagaagttt
gatgagttcttcctggagctgctagataactcagagaagtcactgaacgacatgtttgtg
cggacgtacgggaagctgtacacgcacaactcggagatctttgaggacctgttctcggag
ctgaaacgctactacaccggcgggaacgtcaacctcgaggagatgctgaacgacttctgg
tcacgccttctggagaggatgttccagctgctgaactcgcagtacaccttcaccgacgac
tatctggagtgtatcagcaagtacacggaccagctaaagccctttggagacatcccgcgg
aaactgaaggctcaggtgacccgcgccttcatcgccgccaggaccttcgtccagggtctc
atggttgggcgggaggtggccaacagggtgtcgaaggtgaacgtgtctccaggctgcagt
aaggctctgacccggatgctgtactgcccgtactgcggcgggctgcccggactgcgaccc
tgcgggaattactgccagaacgttatgaagggctgcctcgccaaccaggccgacctggac
cccgagtggaacctgttcatcgatgcgatgctgctggttgccgagcgactggagggaccc
tttaacattgaggcggtgatggagcccatcgacgtgaagatctcagaggccatcatgacc
atgcaggacaacagcatgcaggtctcagccaaggtgtttcagggatgtggtcatccgaag
ccggccggactgagccggacgtcccgcgggatctcggaaaagggttttaacactcgtttc
cgaccgtacagcccagaggagcgtcccaccaccgccgccgggaccagcctggaccgactg
aggaatgtgtggagaacaatgcagaacagcgttattgatattaaagaaactctaaagaag
tctaagaagttttggtcgactctgccggatgccgtctgcagccgggagcgggtcagtgat
gacgacgagcagtgctggaacagccacgctaaaggaaggtatttcccggaggtggtgaag
gacggattgacgggtcagctgaataacccggaggtggaagtggacatcacccggccggat
acgttcatcaggcagcagatcatggccctcagagtgatgaccaacaaactccgcaacgcc
tacaacggcaacgacatctacttccaggactccagtgacgagggcagcgggtcgggcagc
ggcagcggctgcactgaaggatgcaccactgagtatgacttcgtcgctacagaggcaccg
gtggtggaggcggaccgaagcgacccccgacccgccactgacaacgccggcctccgcggc
cacgccccgcctccgccctgccaactggcggcgatagccggcattctgctgctgctactg
tggcagtggagataa
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