Astyanax mexicanus (Mexican tetra): 103026146
Help
Entry
103026146 CDS
T05042
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04141
Protein processing in endoplasmic reticulum
amex04210
Apoptosis
amex04217
Necroptosis
amex04218
Cellular senescence
amex04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103026146 (capn2b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103026146 (capn2b)
04217 Necroptosis
103026146 (capn2b)
04218 Cellular senescence
103026146 (capn2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103026146 (capn2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103026146 (capn2b)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
103026146 (capn2b)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C2: calpain family
103026146 (capn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
S-AdoMet_synt_N
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
103026146
NCBI-ProteinID:
XP_022521086
LinkDB
All DBs
Position
23:21604261..21648509
Genome browser
AA seq
698 aa
AA seq
DB search
MAGVALTLAKKRAMAAGFGTNAKANKYLNQDFEVLRSQCLGSGQLFCDPMFPAAPESLGF
KELGPGSYKTRGVQWKRPGELCSKPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEDV
MARVVPSGQDFGSSYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSEEGNEFWSAL
IEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAESYELRKAPPDLFQIIQKALEAGALLGC
SIDITSAADSEAITSQKLVKGHAYSLTGATEVHYRGGLEKLVRMRNPWGQVEWTGAWSDN
SSEWKSVDPSERPNASAEDGEFWMSFQEFMRQYCRIEICTLTPDAITSGAVKPWSVSNYN
GNWRRGSTAGGCRNNPQTFWMNPQFVIKLEEQDDDPNDNQTGCSMVVGLIQKNRRRLRKE
GEDMHTIGYAIYEVPPQFKGQRDVHLDKNYFLTHAQKARSETFINLREVSTRFTLPPGEY
LVVPSTFEPNKDGDFCLRVFSEKQTETQICDDPVDAVLDNDTVSDSEVEGSFRAMFVKLA
GADMQISAVELKTILNKVIAKRTDIKTDGFSLDTCRIMVNLMDDDGTGKLGLGEFASLWK
KVQKYMNIYKKNDLDNSGNISTPELRLALKESGFRVNDAIFQLLVARYAAPDLTVDFDDF
VACLMRLEMMFRMFKKIDAHNTGFIEVDFTQWLCLTMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtggctttaactctggctaagaagcgagccatggccgcggggttcggtacc
aacgccaaggccaacaagtacctgaaccaggacttcgaggtgctgcgcagtcagtgcctg
ggctccggccagctgttctgcgaccccatgttccccgccgcccccgagtctctgggcttt
aaggagctcggacctggatcctacaaaaccaggggagtgcagtggaaaagacccggggag
ctgtgttccaaaccccagttcattgttggtggtgccacaaggaccgacatctgccaagga
gccctgggggactgctggctcctggcagccattgcatctcttactctgaatgaggatgtg
atggccagggtggtcccgagtggccaggatttcggttccagctacgccggcatcttccac
tttcagttctggcagtttggcgagtgggtggacgtcgtcattgatgatcggctgccggtg
aaggatggaaagctgctgtttgttcactcagaggagggtaacgagttctggagtgccctg
atagagaaggcctacgccaaggtgaacggctgctacgaggctctgtctggaggctccacc
actgagggttttgaggacttcactggaggcatcgctgagagctacgagctgaggaaagct
ccgcctgacctgttccagatcatccagaaagccctggaggcaggagctctgctgggctgc
tctatagatatcaccagtgctgctgattcagaggcgatcaccagtcagaagctggtgaag
ggacacgcctactctctcactggggctaccgaggtgcattatcgtggtgggctggaaaag
ctggtgcggatgcggaacccctggggccaggtggagtggactggagcatggagtgacaac
tcgtctgagtggaaatctgtggatccttcagaacggccgaacgctagtgcagaagatgga
gaattctggatgtcgtttcaggagtttatgcggcagtactgccgtatagaaatctgcacg
ctgaccccagacgctatcactagtggtgcagtcaagccctggagtgtgagcaactacaac
ggcaactggaggagaggctccactgcaggaggctgcagaaacaatcctcaaacgttctgg
atgaaccctcagtttgtgataaagctggaagaacaggatgatgaccccaatgacaaccag
accggctgcagcatggtggtgggcttgattcagaaaaaccggcggcggctgaggaaagag
ggggaggacatgcacaccattggctatgccatctatgaggtgcctccacagtttaaagga
cagagggatgttcatctggataagaattacttcctgacgcacgctcagaaagctcgctca
gagaccttcatcaacctgagggaggtcagcaccaggttcacgctgcctcctggagagtac
ctggtcgtgccctccacctttgaacccaacaaggatggagacttctgtctgcgcgtgttc
tcagagaagcagaccgagacacagatttgtgacgatcctgttgatgctgtattagataat
gacactgtatcagacagtgaagttgaaggcagcttcagggctatgtttgtgaagcttgcg
ggagctgacatgcagatctctgcggtagagctcaaaaccatcctaaataaagtgattgcg
aaacgaactgatatcaagacagatggcttcagccttgatacatgccggatcatggtcaac
ctcatggacgatgatggcactggaaagctgggtctgggcgagtttgcatcactgtggaag
aaagtgcagaaatacatgaacatctataagaagaacgacttggataattcagggaatatc
agcacaccggagttgcgcttggcactgaaggaatcaggattcagagtgaatgacgccatc
ttccagctgctagtggcgcgctacgctgctccagacctcaccgtcgactttgacgacttt
gtggcatgtctcatgcgtctggagatgatgttccgaatgtttaagaagatagacgcacac
aacactggcttcatagaggtggacttcactcagtggctgtgcctaaccatgatctaa
DBGET
integrated database retrieval system
