Astyanax mexicanus (Mexican tetra): 103026166
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Entry
103026166 CDS
T05042
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03320
PPAR signaling pathway
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103026166
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
103026166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103026166
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103026166
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103026166
Nuclear receptors [BR:
amex03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
103026166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103026166
NCBI-ProteinID:
XP_049319103
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All DBs
Position
13
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AA seq
473 aa
AA seq
DB search
MFSDAGHAEAWSMSLGLSQLDLDEAIACEFDETSFPALDVSRTSSEDSSDGPGTSSEATP
NRDQHLRKNAKNSGKMCRKPPASLFSYAKLHKDVTSALQNIECRVCGDKASGYHYGVHVC
EGCKGFFRRTVQLKLSYKYCSLNCRIHKRSRNKCQFCRFRKCVVVGMSHTAIRFGRTPLA
ERDRLIAEFRSDAGQLDPELAKLQALAKHLYQSYLKLFPMTKNKARDILSGKDEEYSPFI
VHNMASLKAAQELLNSIRAPVAPFPTPEPTGEMELSFFRQVQFRQVEGVQQVTEFAKSIP
GFVDLDINDQVTMLKYSAIEALIIRMVNFTNKDGILMGCGKIFITREFLKSIRMPFCEMM
EPKFEFSTKFNTLDLEDCDLALFIAALILCGDRPGLLNAKAIEALQDEVLQALDLQLKAL
HPDSPYLFPKLLQKMTDLRPLVADHVRIIHLMKKTELDVCLHPLLKEIMNDLY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttttcggacgctggtcacgccgaggcgtggagcatgagtctggggctgagtcagctg
gacctggacgaggccatcgcctgcgagtttgatgagacgtcttttccagcgctggacgtt
tcgaggacgtctagtgaagactcctctgatggacctggaaccagcagtgaagctacacct
aaccgtgatcaacatctcaggaaaaacgctaagaattctggaaaaatgtgccgaaagcct
ccagcgagccttttctcgtacgcgaagctccacaaagacgtgaccagtgctttacaaaac
atcgagtgcagagtctgcggtgataaagcctctgggtaccactatggagtccacgtatgt
gaaggatgtaagggctttttccggagaaccgttcagttaaagctgtcgtataaatactgc
tctctgaactgtcgcatccacaaaaggagccgcaacaagtgtcagttctgtcgcttcagg
aagtgtgttgtagtaggaatgtcacacacggctattcgttttggtcggacgcccctcgct
gagcgggaccggctgatcgcagagttccgctcggacgcgggccagctggacccggagttg
gcaaaactgcaggctctcgccaaacacttataccagtcctacctcaaactcttccccatg
accaaaaacaaggccagggacatcctatcagggaaggatgaggaatattcaccctttatc
gtccacaacatggcatcgctaaaagctgcgcaggagcttctaaacagcatacgggccccc
gtggccccattcccgaccccagagcccaccggcgagatggagctgtccttcttccgccaa
gtccagttccgtcaggtggaaggagtccagcaggtgacggagttcgccaagagcatcccg
ggcttcgtggacttggacattaacgaccaggtgaccatgctgaagtacagcgccattgaa
gccctgatcatccgcatggtgaacttcaccaacaaggacggaatactgatgggctgcggc
aagatcttcataacccgagagtttctgaagagcatcaggatgcccttctgtgagatgatg
gagcccaaatttgagttctcaaccaagttcaacaccctggatttggaggactgtgacctg
gcactcttcatcgctgccctcatcctctgtggagatagacccggtttgctgaacgctaaa
gctattgaagcacttcaggacgaggttctacaggctctggatctccagctgaaggctctt
cacccagattctccttatctctttcctaaactgctgcagaagatgacagacctccggccc
ctggtggccgaccacgtccgtattatccacctgatgaagaaaactgaactggacgtgtgc
ctccatcctttgcttaaggagattatgaacgatctctactag
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