Astyanax mexicanus (Mexican tetra): 103026184
Help
Entry
103026184 CDS
T05042
Symbol
tcerg1b
Name
(RefSeq) transcription elongation regulator 1
KO
K12824
transcription elongation regulator 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103026184 (tcerg1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103026184 (tcerg1b)
Spliceosome [BR:
amex03041
]
Complex A
U1 snRNP components
U1 related factors
103026184 (tcerg1b)
Complex B
103026184 (tcerg1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW_TCERG1
WW
CEP164_N
FF_RHG35_4th
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
103026184
NCBI-ProteinID:
XP_022523623
Ensembl:
ENSAMXG00000039466
LinkDB
All DBs
Position
17:complement(422250..452326)
Genome browser
AA seq
997 aa
AA seq
DB search
MAESVDGESVAAAGDNRMALQQALRFRSPAPPPGTVMRGPPPLLRPPPPPFAMMRGPPPP
PRPPFGRPPFDPTMPPIPPPGAMPPPIGPPHLQRPPFMPPPIGNMPPPPGMIFPPGMPPV
PASGAPGTLTTEEIWVENTTPEGKVYYYNARTRESAWTKPEGVKIIQQSELNPMMSSQPG
AGASPGGPASAAVSTAASVTPAQPASPTHTLSASPEPSTSPVPAVTQPVPSPVISEVPPV
VSTPPATVTPVAVVSVPTVTATVTAVQTMPLLPQSLPPGLPHAVAQPPTAIPAFSPVMVP
PFRVPLPGMHIPLPGMLPGMAPPLVPMMHPQLTITAAPSALAGVIPLPEWTEYKTVDGKT
YYYNSRTQESTWDKPTELKEKDKDGERGREAHSANEVEAMEIGDMELKAEATILSKEAPK
EEEMTEEEKAAQKAKPVATNPIPGTPWCVVWTGDDRVFFYNPTTRQSMWDRPDELVGRAD
VDKYIQEPPHKRGLEDSKKLVMGISREELELAAEEAQDDEPSKAKKRKKEEVKEADSEKE
AAVEAELKAARDRAVVPLEARLNQFKDMLLERGVSAFSTWDKELHKIVFDPRYLLLNPKE
RKQVFDQYVKTRAEEERKEKKNKLMQAKDDFRKMMEDARLNLRTTFSEFASKHAKDPRFK
AIEKMKDREAMFTEFMTALRKRDKEDFKTKGEKVKQDFFDLLSDHHVDIQQRWSKVKDKL
ETDQRYKAVESSAAREELYRQYAEKQAKNIDVEKEKELERQARIEASLREREREVQRARS
EQTKEIDREREQHKREEAIQHFKALMSDMVRSTDASWSDARRNLRKDHRWESAALLERHE
KEKLFEEHVEALTKRKKEQFRQLLDETTMITLTTTWKEVKKIIKDDPRCIKFSSSDRKRQ
REFEDYIKDKYITAKADFRTLLKETKFITYRSRKLILESDQHLKDIEKVLQNDKRYLVLD
CVPEERRKLTMFYIEDLDRRGPPPPPTASEPTRRSTK
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtctgtagatggagaaagcgttgcggcggccggagacaacagaatggcgctg
cagcaagcccttcgttttcgaagccccgcccctccacccggtacagtgatgcgaggtcct
ccaccgctgctgcgccccccgccgcctcccttcgccatgatgagaggacctcccccaccc
cccagacctccgtttggaagacctccctttgatcctactatgccacctatcccaccgcct
ggtgccatgcccccaccaattgggcctccacacttgcagaggccacccttcatgccacct
cccattggcaacatgcctccccctcccggcatgatcttccctcccggaatgccaccagtg
ccagcttcaggagctcctggtaccctgaccactgaggagatatgggtagagaacaccacc
ccagagggcaaggtgtactactacaacgcccgaacccgtgaatcagcctggaccaaacca
gagggagtgaagatcatccagcagtcagagctcaaccccatgatgtcctcccagccgggg
gcaggagcctcccccggcggcccggcgtctgctgccgtcagtactgctgcttcggtgact
cccgcccagcctgcctcccccacccacaccctcagtgccagccctgaacccagcaccagc
cccgtccctgcggtgacccagcccgtgccctctcctgtgatatccgaggtgccccctgtg
gtctccactcctcctgccactgtgactccagtcgctgtggtcagtgttcccacagtcact
gccaccgttacggccgtgcagaccatgccattactgccccagagcctcccgccgggcctg
cctcacgccgtggcccagccgcccaccgccatcccagccttctccccggtcatggtgccc
ccattcagagtgcctttacccggcatgcacatccccctgccaggtatgctgccaggtatg
gcccctccattagtgcccatgatgcacccacagctgacgatcaccgcggcgccctccgcc
ctggccggagtgatcccgctccccgaatggaccgagtacaaaaccgtggacggcaagact
tactactacaacagccgcacgcaggaatccacctgggataaaccgaccgagctgaaggag
aaagataaggatggggagagaggacgagaagcccattcagccaatgaggtggaggctatg
gagatcggagacatggaactgaaggctgaagcaaccatcctgtctaaagaggcgccaaag
gaagaggaaatgactgaagaggaaaaagcagcgcagaaggcgaaaccagtggccaccaat
cccatccctggaaccccctggtgtgttgtgtggacgggggatgaccgcgtgttcttctac
aatcccacaacccgtcagtccatgtgggatcgtccggatgagctggtgggtcgggcggac
gtggataaatacatccaggagcctccacataaacggggtttagaggactccaagaaactg
gtgatgggcatcagcagggaggagcttgagctagccgcagaagaagctcaagatgatgag
ccttcaaaggctaagaagagaaaaaaggaggaggtgaaggaggcggactctgagaaggag
gcggcggtggaggcggagctgaaggcggctcgggaccgggcggtggtgccgctggaggct
cgcctcaatcagttcaaggacatgctgctggagagaggggtttcagccttctccacatgg
gataaagagttacacaagatcgtatttgatccacgatatttactcctcaaccccaaagag
aggaagcaggtgtttgatcagtatgtgaagactcgtgctgaagaagagaggaaagagaag
aagaataaactgatgcaggctaaagacgacttcagaaagatgatggaggacgccaggctt
aacctgaggaccacgttcagtgagtttgcctctaaacatgcgaaggatcctcgtttcaag
gccattgagaagatgaaggacagagaggccatgtttacagagtttatgactgcgctcagg
aagagggacaaagaagatttcaaaactaaaggagagaaggtaaaacaggatttctttgac
ttgctgtcggatcatcacgtggatatccagcagcgctggagtaaagtgaaggataagctg
gagacggatcagcgctacaaggctgtggagagttccgcagcccgagaggagctgtaccga
cagtacgctgaaaaacaggccaagaatatagatgtggagaaggagaaggagctggagagg
caggctcgtattgaggcgagtctgcgagagcgagagcgcgaggttcagagagctcgatcc
gaacagaccaaggagatcgaccgcgagcgagagcagcacaagcgagaggaggccatccag
cacttcaaagccctcatgtctgatatggtgaggtcgactgatgcctcctggtcggacgcg
aggcgtaacctgcgtaaggatcaccgctgggagtcggcagctctgctggagcggcatgag
aaggagaagctgtttgaggagcatgtggaagctctcaccaaacgcaagaaggagcagttc
agacagctgctggacgagaccaccatgatcacactgaccaccacgtggaaggaggtgaag
aagatcattaaagatgatcctcgctgcatcaaattctccagcagtgatcggaagagacag
cgggagtttgaggactatataaaggataaatacatcacggccaaagcggacttcagaact
ctgctcaaagagaccaagttcatcacatacagatccagaaagctgattctggagtcggat
cagcacctgaaggacattgagaaggttctacagaacgataaacggtacctggttctggac
tgcgtccctgaggaacgccggaagctcaccatgttctacatcgaggatctggaccgccga
ggacccccacctccccccaccgcctcagaaccgacccggcgctctaccaagtga
DBGET
integrated database retrieval system
