Astyanax mexicanus (Mexican tetra): 103026308
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Entry
103026308 CDS
T05042
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103026308 (rtn1a)
03036 Chromosome and associated proteins [BR:
amex03036
]
103026308 (rtn1a)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103026308 (rtn1a)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103026308 (rtn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
Motif
Other DBs
NCBI-GeneID:
103026308
NCBI-ProteinID:
XP_007247617
Ensembl:
ENSAMXG00000021336
UniProt:
A0A8B9JTK3
LinkDB
All DBs
Position
7:9855640..9902856
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AA seq
796 aa
AA seq
DB search
MAGKREVEDSWLAEEEEELRAGTGRPLSSSTNWEDIGTSYPAGDGRRGTGVAMETASTGD
SMSDLFQKSSPGQDDLYTSLLSSHSNSSSSNPFGGGAPLFSSEGNRSPPAPAGTDSGIGM
TPGDPYDLQTHRTDPYNYMDMSDDLSDLGNLGNLGINKSKQQPMRGYDEDDDDLGGLQDF
KQNKEPEPDPFDLGRYLEKNAPSSGAVESKDSLGSAGGQHSFPFVEDPSDEETAEYRSYR
MMGTPQTASPVKITVTTDSRNPATQPQRVSPQGGATERDSVLSFGQQGLPTVTLSEPEDD
SAASSANHSPNHSPTGRESPSDILFQPAGIKSASSVHNTSAPYQDTKVPAKPSNPWDMPG
FGGRDNDGSGAESGDSEIEQVAEELDSPRPDKVQSAKGGFGQSGNPFGQPTSANRGSDKA
NNPFEMQQANKLSASNPFELPSNVKTGFGQPGNPPIYSLLREEREAELDSDLLIESASEE
SPKREQGYLPPKPSSPPATNISTNPISPPRRTPEPVVSTQKEKEKEKEKEKEEEKKDIVE
KPVEKVKPQPQQHEDKPRPPATGTAAAAPEQRPLENLGSKSRSSGETKAVGAVRAELPPF
LQNFSKQKVVDLLHWRDVRQSGLLFGSVLLLLFSLTQFSVVSVVAYLALATLSATISFRV
YKSVLQAVQKTDEGHPFKAYLEVEIAMSPEQISKYVDKVQLYVNYTLKELRRLFLVQDLV
DSIKFAVLMWLLTYVGALFNGLTLLILAVVSMFSMPLVYEKYQTQIDQYVGLVRTQVNTI
MGKIREKVPGAKRKDE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaagcgcgaggtggaggactcgtggctggcggaggaggaggaggagctgcgc
gcggggacgggcaggccgctctcgagctccacgaactgggaggacatcggcacgagctac
ccagccggggacgggcggagaggaaccggcgttgccatggaaactgcatccacaggtgac
tccatgtctgacctttttcagaagtcttcccctggccaagatgacctctacacttccctc
ctctcctcacactctaattcctcctcctctaatccgtttggtggaggcgctcctcttttc
tcctctgaaggaaaccgttctcctcctgctccggctggcactgactccggtatcggcatg
acccctggcgacccctatgacctccagacgcacaggaccgacccatacaactacatggac
atgagcgatgacctcagtgaccttggtaaccttggcaacctcggtatcaacaagtcaaag
cagcaaccaatgaggggttacgatgaagatgatgacgatttgggaggcctccaagatttc
aagcagaacaaggagcccgagccggacccctttgacctcgggcgctacctggagaaaaac
gccccttcatcaggagccgtggagagcaaagacagcctggggtcagctggaggtcagcac
tcttttccatttgtggaggatccatctgacgaagaaacggctgagtaccgctcgtaccgc
atgatgggaacaccacagactgccagtccagtgaagatcaccgtgacgaccgactcccgt
aacccagcaacccagccacagagggtgtctccacaagggggagccacagagagggatagc
gttcttagttttgggcagcaaggtcttcccacggtaacactgtcggagcctgaagacgac
agcgccgcatcctctgccaatcactcccctaaccactcccctacaggacgagaatcaccc
tcagacattttgttccagcccgcagggataaagtcagcaagctcggttcataacaccagc
gccccctatcaggacacaaaagttcctgccaagccctccaacccatgggacatgcctgga
ttcggtggacgtgacaatgatggcagcggggcagaatctggagattctgaaatcgagcaa
gttgcagaagagcttgattcaccaagacctgacaaggtccaaagtgcaaaaggggggttc
ggccaatctggcaaccctttcggccaacccaccagcgccaaccgaggttcggataaagct
aacaatccttttgagatgcagcaagctaacaagttgagtgctagcaatccctttgagctt
cccagcaacgtcaagactggtttcggccaacctggcaaccctccaatctacagtctcctt
cgtgaagagagggaggccgagctggacagtgacctcctcatcgaatcagcttctgaggag
agccccaaaagggagcagggatacctccccccaaaaccgagctcccctccggcaacgaac
atctccaccaaccccatctcaccacctcgccgcacgcccgagccggtggtgagcacccag
aaagagaaggagaaagagaaggagaaagaaaaggaggaggagaagaaggacattgttgag
aagccagtggaaaaggtcaagccccagccccagcaacatgaagacaagccccgcccccca
gcaacaggcacagctgcagctgctccagagcagcgccccctggagaacttggggagcaag
agcaggagcagtggagagacgaaagcagttggcgctgtgagagcagaactgcctcctttc
ctgcagaacttcagcaaacagaaagtggtggacctgctgcactggcgggatgtgaggcag
tccggtctgctcttcggcagcgtgctgctgctgctgttctcactaacgcagttcagcgtg
gtcagtgtggtggcttatctcgctctggccacactctcagccaccatcagcttcagagtc
tacaaatcagtgctgcaggccgtgcagaaaaccgacgagggacaccctttcaaggcctat
ctggaggtggagatcgctatgtctcctgagcagatcagtaagtatgtggataaagtgcag
ctgtacgtgaactacactctgaaagagctgcgcaggctcttcctcgtccaggacctggtc
gactccataaagtttgcagtgttgatgtggctgctgacctatgtaggagctctctttaat
ggcctgactctgctcatcctggctgtggtgtccatgttctccatgcctttggtttatgag
aaatatcagactcagatagaccagtatgtggggctggtgagaacccaagtgaacaccata
atgggaaagatacgagaaaaggttcctggggccaaaaggaaggatgaataa
DBGET
integrated database retrieval system