Astyanax mexicanus (Mexican tetra): 103026317
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Entry
103026317 CDS
T05042
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecule (CAM) interaction
amex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
103026317 (nfascb)
04517 IgSF CAM signaling
103026317 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103026317 (nfascb)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
L1 family
103026317 (nfascb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
C2-set_2
Ig_PDGFR_d4
Fn3_ROS1
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
103026317
NCBI-ProteinID:
XP_007250039
Ensembl:
ENSAMXG00000018756
UniProt:
A0A8B9RNV0
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All DBs
Position
13:33063424..33094908
Genome browser
AA seq
1174 aa
AA seq
DB search
MRTERWWEFLATFTLLLLIWRVDSIMEIPPNVRQPPMIIKQSVQDHIVEPTDPIIVECEA
TGNPPPVFTWTRDGVYLNVARDPQVSMKRRSGTLEIFFWGRPEDYEGMYQCTATNEFGSA
VSSHIHLRVSKARTWLKEYLEPVSVFVGLPLILPCNPPVGPPKPQTYWMNSSMVPIRQDR
RVSMGENGDMYFSSIVAEDALTNYVCTARFPNSNTIQQKPPLILQVHTARMAAQIAPKFM
KPKGTASSQIGMLGEELVLECFASGVPAPSIKWTKDWEPLSMDGMKLENFNKTLRIKKIS
MDDGGEYICTASNRMGYLDHIITVRVKSTPFWVQKPESLVLSRDDGGQIECQADGIPRPR
IQWLVNGEPIEDAPKRADRQVSGDTLTFRSVVPDSSAVFQCNASNPYGYILANAFLAVMD
MKPRLLGFRNQLVKVTEGSQTLLHCPYFGSPKPDLRWSKGGMGSLEGGRFKVLSNGTLEI
RRTKLQDQGTYVCSASNVIGREEMDVQLEVKEPTKILRAPHNVIVIKGSLARFECKFQTD
STLDVTVTWLKDKKFLILGRRMTKDEDSLTIADVYRRDEGVYTCRVKTEVEDVSVSAKLT
VMDRPDPPTDLEVSDPYERSARLTWIPGDSHHSPIKEYLVQYTEDLLADYWLVQSGWKNL
TSYPGHLNSVVLKLMPFVEYRFRVIAINGIGPSRPSRPSEYYETGGAVPDAIPKNIKGVG
TGIFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSHIIYETDTFT
PYEIKVQAVNYFGLGPESPIIIGFSGEDRPTAAPDDLRVSDVESTKLTVHWQPVPQASIN
GEIKEYTVYYWRESSRLPHHTVSIRIKSKSFKANGPRLSGPLTGLIPYSNYMMYIVVANN
RYEGPPSNRIGFQTLEGVPSVPRSFRIMHRHYDTLYVDWEEPAEPNGILIGYTLKYQTLN
VSGERMQVENLPPNATSFSLRRFDRYTRYKFSLAAQTQIGVGEVVTGESPHFTTEEFTRE
QVDIATQGWFIGLMCAIALLVLIMLTVFFIKRSRGGKYPVRAKRDFALGPLDDKEEGTFD
YRSLERITRLSTLPYSRREEESRQGRSQGTIEHMQKMTNSDDSLMEYGEGDEIEFNEDGS
FIGEYTGTSKRDRDSSQYQESSEATSPVAIYSFA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgagagatggtgggaatttctggccacattcactctcctcctgctaatatgg
agagtggattctataatggaaatccctcctaatgtgagacagccacctatgataatcaag
cagagtgtccaggatcacatcgtggagccgactgaccccatcatagtggagtgtgaggcc
actggaaaccctcctcctgtcttcacatggacacgtgatggagtgtatctgaacgtggcg
cgggaccctcaggtctctatgaagagacgttctggcacgctggagattttcttttgggga
cgacctgaagattacgagggcatgtaccagtgcacagctactaatgagtttggctcggct
gtgtccagtcatattcatttacgtgtctccaaggctcgtacgtggctgaaggagtatttg
gagcctgtgtcggtgtttgtcgggcttcctcttattctgccgtgtaatcctccagttggc
cctcccaaaccccagacctactggatgaacagctcgatggtaccaatccggcaggaccgt
agagtatcaatgggagagaacggagacatgtacttctccagcatcgtcgctgaggatgcc
ctcacaaactacgtctgcacagctcgcttccccaactcgaacaccatccagcagaaacct
cctcttatccttcaggtgcacacagctcgtatggcagctcagattgctcccaaattcatg
aagcccaaagggacagccagctctcagatcggcatgctgggggaggagcttgtcttggag
tgttttgcttctggagttccagctccctccatcaaatggactaaagactgggaaccgttg
tccatggatgggatgaagctggagaacttcaataaaactctgcgcattaagaaaatttct
atggatgacggaggagaatatatctgcactgccagcaacagaatgggctacctggaccac
atcatcactgttagagttaaatcgactcccttttgggtccagaagccggaaagtctggtt
ctttctcgagatgatggtgggcagatagaatgtcaggctgatggaattcccagacctcgg
atacaatggctagttaatggagaaccaattgaggatgctcctaagcgtgcagacagacag
gtatctggagacactctcacatttcgctctgtggtgccagacagctcagctgtgttccag
tgcaatgcttccaacccatatggctacatactggccaatgcctttctcgcagtcatggac
atgaagcctcgactgctgggctttagaaatcagttggttaaagtgacagaaggtagtcag
actcttctgcactgtccatattttggatccccaaaaccagacttgcgatggtctaaaggt
gggatgggttcgttagagggaggtcgttttaaagttttgtccaatggaacactggagatc
aggcgcaccaaactccaggaccaagggacgtatgtctgcagtgccagcaatgtcattggg
agagaggagatggatgtacagctggaggttaaagagcccaccaaaatcctccgtgcgcca
cataacgtgatcgtgatcaaggggagcttggcacgctttgagtgtaagttccaaactgac
tcaaccctggacgtgactgtgacctggctcaaggacaaaaagttcctgatcttaggtaga
aggatgacaaaggacgaggactctctgaccatcgctgacgtgtacaggagggatgagggc
gtgtacacctgcagagttaagactgaagtggaggacgtcagtgtatccgccaaacttact
gtgatggatcgccctgaccctcccacagacctagaggtgtctgatccatatgagaggagt
gccagactcacttggataccaggagacagccaccatagccccatcaaagagtatctggtg
caatatactgaagatctcctcgctgactactggcttgtacagagtggatggaagaacctg
accagttaccctggacatctaaactcagtggtgctaaaactcatgccatttgtggagtat
cgttttcgagttattgcgattaatggcatcggccccagcagacccagcagaccgtctgaa
tactatgaaactggaggagctgtgcccgatgccatcccgaaaaacatcaaaggagtgggg
actggaatcttcagaaataacatggagatcagctgggagccgttggagtacagagagtgg
aacgggccaaagctgggctacatggtgtggtggaggcggagagactccagagaggagtgg
aagaattacaccacctactggtggtgcagtcacatcatctacgagacagacaccttcaca
ccctacgagatcaaagtgcaggccgtcaattactttggcctcggacccgagtctcctatc
atcattggcttctctggggaggatcgtcccactgctgctcccgatgatctgcgggtctca
gatgttgagagtactaaactgactgttcattggcagcctgtgccccaagccagcatcaac
ggagaaattaaggagtatacggtgtattactggcgagagagcagccgtctccctcatcat
accgtcagcataagaatcaaatccaaaagctttaaagccaatggtccacggctttccggc
ccccttactggtctcatcccctacagcaactacatgatgtacattgtcgtggccaacaac
cgatacgagggtccacctagcaacaggattgggttccagacacttgaaggagtgccatct
gtcccaaggtcattcaggatcatgcacaggcattatgacaccctgtatgtggactgggag
gagcctgcagaacccaatggcatcctcattggatataccctcaaataccagacattgaat
gtgtcaggagagaggatgcaggtggagaaccttccccccaacgccacctccttctcactg
cgccgcttcgaccgctacactcgctataagttctctctggctgcccagacgcagattgga
gtcggggaggtggtcaccggggagtcgccccatttcacaactgaagaatttacccgggag
caagtggatatagccactcagggatggttcatcggcttgatgtgcgccattgcactcttg
gttctcatcatgctgacggtcttcttcatcaaaaggagtcgaggaggaaagtacccagta
cgagctaagcgagatttcgcgcttggtccgctggacgataaggaggaaggcacttttgac
tacaggtctcttgaaaggataacacgattgtccaccctgccctactccagacgggaggag
gagagccgtcagggtcgtagtcaggggactattgaacacatgcagaagatgaccaacagt
gacgacagcctgatggaatatggagagggggatgagattgaatttaatgaagatggctcg
ttcattggcgagtacactggcaccagcaagagagacagagacagcagccagtaccaggag
agctctgaggccacctcccctgtcgccatctactcttttgcataa
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integrated database retrieval system
