Astyanax mexicanus (Mexican tetra): 103026349
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Entry
103026349 CDS
T05042
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
LarA_C
S1_RRP5
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
103026349
NCBI-ProteinID:
XP_022540686
Ensembl:
ENSAMXG00000004294
LinkDB
All DBs
Position
7:21505877..21646746
Genome browser
AA seq
988 aa
AA seq
DB search
MLRRARAAKVYKEETSTDEDSDEPSVRPVDIDEPEEWVPEVKDKSKGTRGRKTKDETAEK
KPTVRRTAKPKEPKPKEPKETKPKAARKPRAPKAPKVKEDVNKEKEEHKSDGKVEQMESL
QEVRVKEERLSFSMDKAFSNISTTAGDMPGEGPSSSKQLSKVKKEEPEDDFNFDEPVQKK
QKTMSAPQGRPVKLKAGNSLRDDLQMNWDPIQVLAEKTGVDQWVCRNISQLLQEENTIPF
MVRYRKELINHMDADAVRDVQLALEELCTVAKKSQSITQTLKKEGVLTSELERDLKNCRS
ADELDHVYAPYKKGSKLSKARRAKELGLESAALALLQSPQTLQLHSWIKPDTKGLSTLEE
VATGVEQILADMMAKDGETLTYVRSVCDRSDVTIQSTVSKTALKEQQPKPADQKSKPKDI
SKFSLYCDFKCSVKRIQHHQTLAINRGENLKILSVKVTIPDWVKTDFCRWCVNVRWRPQG
FARPELMKILNSAVEDSYKRLITPLLCRGYRTKLTTNAEKESVAMFVRNLRQRLLMCPIR
GRVLMGVDPGYRHGCKLAVLSPTSQILHTDVVYLHGQGRNREADKLRHLMLKHSCHTVVI
GNGTACRETEAFFADLIKSGFFKPLDVSYCITNEAGASIYSVSPEAVKEMPDMDPNLRSA
VSIGRRVQDPLAELVKIDPKHIGIGTYQHDVSQSLLRAALDGVVQECVSFVGVDINICSE
TLMRHVAGLNAGRAKSIAEWRETNGPFLNREQLKLVKGLGPKSFQQCAGFVRINPETVNS
YGSGGNPDSAAAEKPTAKKSRTKTTGSICNQPNPLDQTCIHPESYSIAMRFLSQIGGGLN
QLGSPELRQQVESSVKSSGLEALAQSLNTSPETLQLIVDGLTQPPGFDIRQDFEQADFKR
GIVSMSDLHQGMLLTGRVENTALFGAFVDIGVGRSGLIPKRFITPDKLPADQRRRSLALG
PGERVEVRVLDVDLQRNRISLDLVRVLR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcagggccagagcggcgaaagtgtataaggaggaaacttctacagacgaggac
tcagatgaaccgtctgtacgtccagtggacatagacgaaccagaggaatgggtcccagaa
gtgaaagacaaatccaaaggaaccagaggcagaaagacgaaagatgaaacagccgagaag
aaaccaactgtcagacgaacagcgaaacctaaagaacccaaacccaaagaacccaaagag
accaaacctaaagccgcgaggaagcctagagctccaaaggcccctaaagtaaaggaagat
gttaataaagagaaggaagaacacaaaagtgatggaaaggtagagcagatggaatcacta
caagaagttagagtaaaggaggagaggctatcgtttagcatggacaaggcgttcagtaac
atcagtaccaccgcaggagatatgcctggtgaggggccgtcctccagtaaacagctatct
aaagtaaaaaaggaggagccagaggatgactttaactttgatgaaccagtgcagaaaaag
cagaagaccatgagtgcacctcaggggagaccagtcaaactgaaggctgggaattcctta
agggatgacctgcagatgaattgggatcccattcaggtcttagctgagaagactggagtg
gatcagtgggtttgtagaaacatctctcagcttcttcaggaagagaacaccattccattc
atggtgcgctacagaaaagagctgattaatcacatggatgcggacgctgtgagggatgtg
cagctcgctctagaggagctttgcactgtggcaaagaagagtcagtccatcactcaaact
ctaaagaaggagggggttctgacctctgagctggagcgggatctgaagaactgcaggagt
gctgatgagctggatcatgtgtacgctccctataagaaaggctctaagctgtcgaaagcg
aggcgagcgaaggagctgggcctagaatctgcagctttagctctgctgcagtcaccacag
actctgcagctgcactcctggatcaaacctgacactaaagggttgtccacactcgaggag
gtggccactggtgtagagcagatcctggctgatatgatggcgaaagatggcgagacactg
acctacgtccgatcagtatgtgacagaagtgatgtaacaatccagtcaacagtgtctaaa
actgcgctgaaagaacagcagccgaagccggccgaccagaagagcaagcctaaagacatc
tccaagttcagcctgtactgtgatttcaaatgcagtgtgaagcgaatccaacatcaccag
acgctggccattaaccgaggggagaatctgaagattctgtcagtgaaagttaccatcccc
gactgggtgaagactgacttctgtaggtggtgcgtcaacgtcaggtggagaccgcagggc
tttgctcggcctgagctgatgaagattttaaattcggctgtggaggattcctacaagcgt
ctcataacacccctgctctgccgaggctacaggactaagctgaccactaatgcggagaag
gagtctgtggctatgtttgtgcgtaacctgcggcagcgtctgctgatgtgtccgattcgt
gggcgtgtcctcatgggggtggatccaggatatcgacatggctgcaaactggccgtcctg
tcccctaccagtcagatcctgcacactgatgtggtgtacctgcacggtcagggcagaaac
agagaggctgacaaactgcgccacctgatgctgaaacacagctgccacacagtggtcatt
gggaacggtactgcatgcagggaaacggaggccttctttgctgacctcatcaaaagtggc
ttcttcaagcctttggacgtgtcctactgcatcaccaatgaagcaggagcatccatctac
agtgtcagtccagaggcagtgaaggagatgccagacatggacccaaacctgaggagtgca
gtttcgatcggaaggcgtgttcaggaccccctggctgagctggtgaagattgaccctaaa
cacatcggcattggcacctaccagcacgacgtgtcgcagagtctgctgagggcggcgctg
gacggcgtggtgcaggagtgtgtgagcttcgtgggagtggacatcaacatctgctcggag
acgctgatgaggcatgttgcaggtctgaatgcaggcagagcgaaaagcatagcggagtgg
agagagacgaacgggccctttctgaaccgagagcagctgaagctggtgaaaggcctcggc
ccaaagagcttccaacagtgcgccggctttgtccgcatcaatccagagactgtgaacagt
tatggctcaggtggaaatccagactctgcagctgctgagaagccgacagcaaagaagagc
agaactaaaaccacaggcagcatctgcaaccagccaaaccctctggaccagacctgcatc
catcctgagtcctacagcatcgccatgaggttcttgtctcagattggtggtggtttgaat
cagctgggtagtcctgagctcaggcagcaggttgagagcagtgtgaagagcagtggtctg
gaggctttggcccagtctctcaacaccagccccgagacccttcagcttatcgtggatggc
ctcacccagccgcctggttttgacatccgtcaggactttgagcaagctgattttaagcga
ggaatcgtctcaatgagtgatctgcaccagggcatgctgctgaccgggcgagtggagaac
acggctttattcggggcctttgtggatattggagtgggccgctctggcctcatcccaaag
cgcttcatcaccccagataaactgcctgctgaccagaggcgccgcagtctggctctagga
cctggggaacgagtagaagtccgcgttctagacgtggatcttcagcggaaccgaatcagc
ttggatctcgtcagagtcctcagatag
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