Astyanax mexicanus (Mexican tetra): 103026439
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Entry
103026439 CDS
T05042
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103026439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103026439
03036 Chromosome and associated proteins [BR:
amex03036
]
103026439
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
103026439
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
103026439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
103026439
NCBI-ProteinID:
XP_022529091
LinkDB
All DBs
Position
6:complement(23300003..23462657)
Genome browser
AA seq
669 aa
AA seq
DB search
MMQGEDKKKRKQILNPRSVSEDYCLRERPKEDTTKMKNKVSTSSAGNSKKKPWSWDQYLE
EEQAIAAHLNLFTEYQTFPNNKSGFRVGMRLEGIDPLHPSMFCVLSVAEVIGCRLRLRID
SYAECYDFWVNADSPDIRPVGWCESTGHKLHPPKGYKINEFDWEKYLEACNAQAAPKNLF
KSQNSTTPASKFQVGMKLEAVDRKNPCLVCVATVADIADNRFLVHFDNWDDTYDYWCDAT
SPHIHPVGWCQDHGRPLTAPQGHPNPEHFVWEEYLEDNSASAVPSQAFCMRAPHGFQVGM
RLEAVDRRNPMLIRVATIVDTEDYRVKVHFDGWHTKFDFWVDSDLPDLHPVGWCGRTGHP
LEPPLINAGPSDLKSPVTQGVCPTPGCKGVGHIKGAKYTGHHSAFGCPYSDINMKKEVVL
PDRLGGEKQIAFVPVHFVQKTKRLFAEDEVEAEDEVKDEEGHVENRAELSGYDGAPRLRG
RTPGQAMVKREHREETSSQGQKAPSPLGKRGRLPSRLAQSTKYLRIKDEEEEIELNSVIA
ERNVDSLQQALHQSVFLSAMSAHPGRDLPLCWEQHCKLLPGVAGVQASRVADWTVEEVAD
FIHSLPGCEEQAKQFREEQIDGKAFLLLTQRDIVKIMSVKLGPALKIYNSILMFKHAEDS
QSASSDTNT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaggagaggataagaaaaaaaggaaacagattttgaatcccagaagtgtgtca
gaggactactgtctcagagagcgtccaaaagaagatacgacaaagatgaaaaataaagtg
tccacttcaagtgcaggtaatagtaagaagaagccatggtcgtgggatcagtacttggag
gaagagcaagccatagcagcccatctcaacctcttcactgagtaccagacatttcctaac
aacaagagtggcttcagggtggggatgaggctggagggaatcgaccccctgcacccctcc
atgttctgcgtgctgtctgttgctgaggtgattggatgccggttgcgtctccgcatcgac
agctacgcagaatgctatgacttctgggtaaatgctgactctcctgatatcaggccagtt
ggatggtgtgagtccacgggccacaaacttcatccaccaaaaggttataagataaatgaa
tttgactgggagaagtacttggaggcatgcaatgctcaggctgcaccaaagaatctgttc
aaatcccaaaacagcaccacacccgcctcaaaatttcaagtgggcatgaagctggaggca
gtggacaggaaaaacccctgcctggtatgtgtggctacagtggcagacatcgcagacaat
cgtttcctggtccacttcgacaactgggatgatacttacgactactggtgtgacgccact
agtcctcacatccaccctgtgggctggtgccaggaccacgggcgccctctcacagcacct
cagggacaccccaatccagaacattttgtatgggaggagtacttagaagataacagcgct
tctgcagttccaagccaagccttttgtatgagagcccctcacggatttcaggtcggcatg
aggttggaggcggtggaccggcgaaaccccatgctgatccgcgtagccaccatcgtggac
actgaagactacagagtcaaggtgcacttcgatggttggcacacaaagtttgacttctgg
gtagactctgacctgccagaccttcatcctgtgggctggtgtgggaggacaggacatcct
cttgaacctccactgataaacgcaggaccttctgacctcaagagccccgtcacacagggt
gtgtgtccgaccccaggctgcaagggagtgggccacatcaaaggcgcaaaatacacagga
caccacagtgccttcggctgtccctactcagacattaacatgaagaaggaggtggtgctg
cctgatcggctgggcggtgaaaagcagatagctttcgttcctgtgcattttgtgcagaag
acgaagcgcctgtttgcagaggacgaggtggaggctgaggatgaggtgaaagacgaggaa
ggccatgtggagaacagggcggagttgtcgggttatgatggcgctcctcgtttacgtggt
cgaaccccaggccaagccatggttaaacgggagcacagggaggaaacttcatctcaggga
cagaaagcgccctctccactcggcaagagaggccgacttccctccaggcttgcccagtcg
acaaaatatctgcgcatcaaagatgaggaggaggagattgaactcaatagcgtcatagca
gagaggaacgtggacagtcttcagcaggccctgcatcagtcagtcttcctgtcggccatg
tctgctcatccgggccgtgacctgccgctgtgctgggagcagcactgtaaactcctgccg
ggtgtggctggtgtgcaggccagtcgtgtagctgactggacagtggaggaggtggctgac
ttcatccattctctcccaggctgtgaagaacaagccaagcagttcagagaggagcaaatc
gacggcaaggcattccttcttctgacgcagcgagacatcgtgaagatcatgagtgttaag
ctcggccccgccctcaaaatctacaattccatcctgatgttcaagcacgctgaggacagc
caatcagcaagcagcgatactaatacatga
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