Astyanax mexicanus (Mexican tetra): 103026478
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Entry
103026478 CDS
T05042
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103026478 (gabra6b)
04082 Neuroactive ligand signaling
103026478 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103026478 (gabra6b)
Ion channels [BR:
amex04040
]
Ligand-gated channels
GABA-A
103026478 (gabra6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
103026478
NCBI-ProteinID:
XP_007237287
Ensembl:
ENSAMXG00000036720
UniProt:
A0A8B9KRV5
LinkDB
All DBs
Position
17:35963565..36026233
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AA seq
443 aa
AA seq
DB search
MAWVRTCVLLSCVCQVWSSAPTEASIYLDNITRILDRLLDGYDNRLRPGFGGPVTEVKTD
IFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIDILRLNNLMVSKIWTPDTFFRNG
KRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLINFPMDGHSCPLKFGSYAYPV
SEIVYTWKKGPLFSVEVPQESSSLLQYDLMGQTVSSERLKSNTGEYIVMTVHFHLQRKMG
FFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYAT
AMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRRASAARATMAAAAGNDGEVVSPPL
DPGGVLKKRLNSLSQREIPPRFTTPPPSDFRQQGSAVPTNAMLAGTSIIDKYSRILFPLS
FGAFNLVYWIVYLTKDTMESRDV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggtgcgcacgtgcgttctgctgtcctgtgtgtgtcaggtctggtccagtgct
ccaactgaggccagcatctatttggataacatcacgcgcattctggacagattactggat
ggatatgacaacagactgcgaccgggatttggaggtcctgttacggaggttaaaaccgac
atttttgtcaccagctttggtcctgtgtcggatgtggaaatggaatatacgatggacgtg
tttttccgtcagacgtggatagacgagcggctcaagttcgagggccccatcgacatcctg
cgcctgaacaacctgatggtcagcaaaatctggactccggacacgttcttccgcaatggc
aagcgctccatttcccacaacatgaccactcccaacaagctgttccgcatcatgcagaac
ggaactatcctctacaccatgagattaaccatcaacgcagaatgtcccatgaggctgata
aactttcccatggatggtcactcttgccctctgaagtttggcagctatgcgtatcctgtc
agtgaaatcgtatatacgtggaagaaagggccgctgttttcggtggaggtcccgcaggag
tcgtccagcctgcttcagtacgacctgatgggacagactgtatcgagtgaacgattaaaa
tccaacacaggagagtacatagtcatgacagttcacttccaccttcagaggaaaatggga
tttttcctgattcagacgtacatcccctgcatcatgaccgtcatcctcgcccaggtttcc
ttctggatcaacaaagagtccgttcctgccagaactgtgttcggaatcaccactgtacta
acaatgaccactctgagtatcagtgctcgtcactcactgccgaaagtctcgtacgccaca
gctatggactggttcatcgccgtctgcttcgccttcgtcttctccgccctaatagagttc
gccgctgtcaattatttctcaactctacaggccaaccgggagctacgccgggccagcgcc
gcccgtgctaccatggcggcggctgccggcaacgacggagaagtagtttcgcctccactg
gaccccgggggtgtgctgaagaagaggctaaattctttgtcccagagggaaataccccct
cgtttcaccaccccgcccccatcggacttccgccagcagggttctgccgtgcccactaat
gccatgttagcaggaaccagcatcatcgataaatactcacgcatcctcttccctctgagc
tttggcgccttcaacctggtctactggatcgtctacctgaccaaagacaccatggagtcc
agggacgtgtga
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