Astyanax mexicanus (Mexican tetra): 103026528
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Entry
103026528 CDS
T05042
Symbol
jarid2b
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103026528 (jarid2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103026528 (jarid2b)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103026528 (jarid2b)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
103026528 (jarid2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
103026528
NCBI-ProteinID:
XP_022538820
Ensembl:
ENSAMXG00000011370
UniProt:
A0A3B1KLX8
LinkDB
All DBs
Position
3:36403258..36587961
Genome browser
AA seq
1322 aa
AA seq
DB search
MSKERPKRNIKRNLKKYDDSDGIPWSEERVVRKVLYLSLKEFKSAQKRQPGDGLSDGAKN
GVQLNGSGSKGGHKEDGSRSQGNDGGSEYWEDGAAKKRPRLQAQRKFAQSQPNSPSSTPV
KLNDPSLPTPAAQIIDLSRRKPKTEDFLTFLCLRGYSAWPTEGSPALPSNMINFGSSQEE
DELDDDEECEEEKTPSVASTSCQSTPRKGKPPGRLNGQVFNGHTKLIKERESTLRPKSRE
PVVKDRSERAETRREHSQCTSTRNHTGTRNHTAHSHGLRGAAEELRKQVSKMNGLSRLST
AGANTAAAKKPKDYRLPSRTVKYTATVTKGHVTYTKAKGELVKKAKLNHSRHSSAAAVGG
AHKANSTNQHQPASNGHGSQPPHSGKAQSSNAKTRRQVLLSNGVHSEANTRFNCRLNGRH
SIKEEEDKGPQWRHNLRNSKRRMDTSVVTEPESTEAKSRVSVSEAKKPKLQPSPLVETRS
KKALGQDKATSALTNGHNITETAASPTQKTGPSAPPPASPAAPGSPAAHQSPANPEPARQ
RPKRASAGKLMFIRQAQQRAQTSAAFSRYANTTSNSKPSKPAEPPTTPQPQTRVDKEKEK
EREKEREKERERSRAGFAALPDVPVFRPNAREFQDPLLYLDSIRERVEPCGLCRVLPPAD
WRPECKLNDEMRFVTQVQRIHKLGRRWGQNVQKLACIKKHLKSQGITMEDPPVIGGCEVD
LARFSELVSDMGGMQQVMDLKKWNRLADLLRIPRSAQDRLAKLQEAYLQYLLSYDQLSPD
EQRQLEQEVLKEKEMLERRRGPLEGHSENSQRTLTLPRYEPKNGLTGLALRNGFHTVEPE
PPRQAGRRRLFSQEKKGDKVDTHHEDKIKEEEEQDKGVLSDQHKCIYKGRSVSLTIFYRI
ARNTMMMCFNKEPGASDVEQEYWRIVDQRDCHVSVHYGKVDTSTHGSGFPVGKSEPFSKH
GWNLTVLPNNSGSILRHLGAVPGVTVPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCI
WYSVPAEEKTKLDNVVHTLLQANGTPGLEMLEKNIMISPEVLSREGIKVHRTVQQSGQFV
VVFPGTFVSKVCCGYSVSETVHFATPQWMNVGYEAAKDLKCRRIAKPFSMEKLLYQIATS
ESKRENALLLSTISSLLKDLRNIEMRQRQELYEAGLLSSARYGTHDSNQPTGEGRKKPRK
WLALESSERRCQTCQHLCYLSMVVQENENVVFCLECALHYVEKQKSCRGLKMMYRYDEEQ
INSLVNLVCGKALKTTVENCNGSSPAKPPAKRGPRKRATVEVSLTHLSSPAQLSKSAATA
IS
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaacggcctaagagaaatattaagagaaatctcaagaaatacgatgacagt
gatgggatcccctggtcggaggagcgagtggtgcggaaggtgctctatctgtcgctgaag
gagtttaaaagtgcacagaaacggcagcctggtgatggcctcagcgatggagccaaaaac
ggtgtccagctgaatggctctggatctaaagggggacacaaagaagatggctctcgttca
caaggcaatgatggaggcagtgagtactgggaggacggtgcagccaagaaaagacccaga
ctgcaagcacagaggaagtttgcccagtctcagccgaactctcccagcagcactccggtg
aagctgaatgacccctcactgcccacaccagccgcacagatcattgacctctccagaaga
aagcccaagaccgaggatttcctcaccttcctctgcctccgaggttattctgcgtggcca
actgaaggctcaccggcattgcccagtaacatgatcaactttggcagttctcaggaggag
gatgagctggacgatgatgaagaatgcgaggaggaaaagacaccaagtgtggcgtcaaca
tcgtgccagtctacaccccgcaaaggaaagcctcctggcagactgaatgggcaggtgttt
aacggccacactaagctgataaaggagagggagagcacgctcaggccgaagagcagagag
ccggtggtgaaggatcgctcggagagggcggagactcgaagagagcacagccagtgtacc
agtaccagaaaccacactggtaccagaaaccacactgcccacagccacggcctcagagga
gcggcagaggaactacgcaaacaggtttccaaaatgaacggcctttcacgactgtctacc
gccggcgcgaacacagccgctgccaaaaagccgaaggactaccggctgccatccagaact
gtgaagtacacagccaccgtgaccaagggccacgtcacctacaccaaagcgaaaggagaa
ctggtgaagaaagccaaactcaaccacagcaggcactcttctgctgctgctgttggtggc
gcccataaagcaaacagcaccaatcaacaccaaccagccagcaacggccacggctcccag
cccccccactcaggaaaagcccaaagtagcaatgcaaaaacccgcagacaggtgctatta
tccaacggggtccacagcgaggccaacacccgcttcaactgccggctgaacggccgccac
agcatcaaggaggaggaggacaaaggaccgcagtggagacacaacctgcgcaactctaag
cgcaggatggacacatccgtggttacggaaccagagagcacagaggccaagtccagagtg
tccgtctctgaggctaagaaacctaagctgcagcctagccctctggtagaaacacgcagt
aaaaaagctctgggtcaggacaaagccacgagcgctctcactaacggacacaacatcaca
gagacggccgcttcccccactcaaaaaacgggtccttctgccccccctcctgcttcccct
gcagcccctggctcccctgctgcccaccagagccccgccaacccggagccagccagacag
cggcccaaacgagcctctgcaggcaaactaatgtttatcagacaagcacagcagagggct
cagaccagcgcggcctttagccgctacgctaacactacctcaaacagcaagccctccaaa
ccagcagagcccccaaccacacctcagccccagacgcgagtagacaaggagaaagaaaag
gagcgtgaaaaggagagagaaaaagagagggagcgaagtagggcaggattcgctgccctg
ccggacgttcccgtcttcaggcctaacgcccgggagttccaggaccccctgttgtaccta
gactctattcgagaaagggtggaaccctgcgggctctgcagggtcctgcctcccgcagac
tggaggcccgagtgcaaactgaacgacgagatgcgcttcgtcactcaggtgcagcgcatc
cacaaactggggcgccgctggggccagaatgtacagaagctcgcctgcatcaagaagcac
ctcaaatctcagggcatcaccatggaagaccctccagtcattggcggctgtgaggtggat
ctagcgcgattctcggagctggtgagtgatatgggcggcatgcagcaggtgatggacctg
aagaagtggaaccggctggccgacctgctccggatccccaggtcagcgcaggaccgactg
gccaagctgcaggaggcgtacctgcagtacctgctcagctacgaccagctgagccccgac
gagcagcggcagctggagcaggaggttctcaaggagaaggagatgctggaacgccgccgg
gggcccctggagggccactctgagaactcccagcgtaccctgacactgccccgctatgag
cccaaaaacggcctgactggactggccctccgaaacggcttccacaccgtggagccggaa
cccccgcggcaggccggccgccgcagactcttctctcaggaaaagaaaggggacaaagta
gatactcatcacgaagacaagatcaaggaggaggaagagcaggataaaggggttctcagt
gaccagcacaagtgtatatacaagggcagatcagtgtctttgactatcttctacagaata
gccaggaataccatgatgatgtgctttaacaaggagccaggagcatctgatgttgagcaa
gagtactggcgaatagtggatcagagggactgccatgtatcagtgcattatgggaaggtg
gacacgagcacacatggaagcggctttcccgtcggcaagtcggagcccttctcaaaacat
ggctggaacctcactgtcctccccaataactctggatccattctgcgccatcttggtgct
gtgcccggggtgactgttccctggctgaacattggcatggtcttttctacctcatgctgg
tctcgagaccaaaaccgccttccatatattgattacttacacactggtgctgattgcatt
tggtattctgttcctgctgaggagaagactaagcttgataatgtggtgcacacgctgctg
caggccaacggcactccaggactcgagatgctggagaagaacataatgatctctccagag
gtgctcagtcgtgagggtataaaagtgcatcgcacggtgcagcagagcggccagtttgtg
gtggttttccctggaacgtttgtgtccaaggtgtgttgtggttacagtgtgtctgagacg
gtgcactttgccaccccgcagtggatgaacgtgggctacgaggctgctaaggatctgaaa
tgcaggcgcatagccaagcccttctccatggagaagctgctctaccagatcgccacatcc
gagtccaaacgagagaacgcacttctgctgagtacaatctcctctctgctcaaagatctc
aggaacatagagatgaggcagcggcaggaactctacgaggccggcctgctctcttctgct
cgatacggcactcacgacagcaaccaacccacaggagagggcaggaagaaaccccgcaag
tggctggcgctggagtcgtccgagagacgctgccaaacatgccagcacctctgctacctg
tctatggtggtacaggagaatgagaatgtggtgttctgtctggaatgtgcactacactat
gtggagaaacagaaatcctgccgtggactgaagatgatgtaccgctatgatgaggagcag
attaacagtctggtgaatctggtgtgcggtaaagctctgaagaccacagtagagaactgt
aacggctccagccccgccaaaccgcctgccaagcgcggcccccgcaagagagccaccgtg
gaggtgtctctgacccacctgtccagccccgcccagctctccaaaagtgctgccacggcc
atctcatga
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