KEGG   Astyanax mexicanus (Mexican tetra): 103026528
Entry
103026528         CDS       T05042                                 
Symbol
jarid2b
Name
(RefSeq) protein Jumonji isoform X1
  KO
K11478  protein Jumonji
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103026528 (jarid2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103026528 (jarid2b)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103026528 (jarid2b)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     103026528 (jarid2b)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 103026528
NCBI-ProteinID: XP_022538820
Ensembl: ENSAMXG00000011370
UniProt: A0A3B1KLX8
LinkDB
Position
3:36403258..36587961
AA seq 1322 aa
MSKERPKRNIKRNLKKYDDSDGIPWSEERVVRKVLYLSLKEFKSAQKRQPGDGLSDGAKN
GVQLNGSGSKGGHKEDGSRSQGNDGGSEYWEDGAAKKRPRLQAQRKFAQSQPNSPSSTPV
KLNDPSLPTPAAQIIDLSRRKPKTEDFLTFLCLRGYSAWPTEGSPALPSNMINFGSSQEE
DELDDDEECEEEKTPSVASTSCQSTPRKGKPPGRLNGQVFNGHTKLIKERESTLRPKSRE
PVVKDRSERAETRREHSQCTSTRNHTGTRNHTAHSHGLRGAAEELRKQVSKMNGLSRLST
AGANTAAAKKPKDYRLPSRTVKYTATVTKGHVTYTKAKGELVKKAKLNHSRHSSAAAVGG
AHKANSTNQHQPASNGHGSQPPHSGKAQSSNAKTRRQVLLSNGVHSEANTRFNCRLNGRH
SIKEEEDKGPQWRHNLRNSKRRMDTSVVTEPESTEAKSRVSVSEAKKPKLQPSPLVETRS
KKALGQDKATSALTNGHNITETAASPTQKTGPSAPPPASPAAPGSPAAHQSPANPEPARQ
RPKRASAGKLMFIRQAQQRAQTSAAFSRYANTTSNSKPSKPAEPPTTPQPQTRVDKEKEK
EREKEREKERERSRAGFAALPDVPVFRPNAREFQDPLLYLDSIRERVEPCGLCRVLPPAD
WRPECKLNDEMRFVTQVQRIHKLGRRWGQNVQKLACIKKHLKSQGITMEDPPVIGGCEVD
LARFSELVSDMGGMQQVMDLKKWNRLADLLRIPRSAQDRLAKLQEAYLQYLLSYDQLSPD
EQRQLEQEVLKEKEMLERRRGPLEGHSENSQRTLTLPRYEPKNGLTGLALRNGFHTVEPE
PPRQAGRRRLFSQEKKGDKVDTHHEDKIKEEEEQDKGVLSDQHKCIYKGRSVSLTIFYRI
ARNTMMMCFNKEPGASDVEQEYWRIVDQRDCHVSVHYGKVDTSTHGSGFPVGKSEPFSKH
GWNLTVLPNNSGSILRHLGAVPGVTVPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCI
WYSVPAEEKTKLDNVVHTLLQANGTPGLEMLEKNIMISPEVLSREGIKVHRTVQQSGQFV
VVFPGTFVSKVCCGYSVSETVHFATPQWMNVGYEAAKDLKCRRIAKPFSMEKLLYQIATS
ESKRENALLLSTISSLLKDLRNIEMRQRQELYEAGLLSSARYGTHDSNQPTGEGRKKPRK
WLALESSERRCQTCQHLCYLSMVVQENENVVFCLECALHYVEKQKSCRGLKMMYRYDEEQ
INSLVNLVCGKALKTTVENCNGSSPAKPPAKRGPRKRATVEVSLTHLSSPAQLSKSAATA
IS
NT seq 3969 nt   +upstreamnt  +downstreamnt
atgagcaaggaacggcctaagagaaatattaagagaaatctcaagaaatacgatgacagt
gatgggatcccctggtcggaggagcgagtggtgcggaaggtgctctatctgtcgctgaag
gagtttaaaagtgcacagaaacggcagcctggtgatggcctcagcgatggagccaaaaac
ggtgtccagctgaatggctctggatctaaagggggacacaaagaagatggctctcgttca
caaggcaatgatggaggcagtgagtactgggaggacggtgcagccaagaaaagacccaga
ctgcaagcacagaggaagtttgcccagtctcagccgaactctcccagcagcactccggtg
aagctgaatgacccctcactgcccacaccagccgcacagatcattgacctctccagaaga
aagcccaagaccgaggatttcctcaccttcctctgcctccgaggttattctgcgtggcca
actgaaggctcaccggcattgcccagtaacatgatcaactttggcagttctcaggaggag
gatgagctggacgatgatgaagaatgcgaggaggaaaagacaccaagtgtggcgtcaaca
tcgtgccagtctacaccccgcaaaggaaagcctcctggcagactgaatgggcaggtgttt
aacggccacactaagctgataaaggagagggagagcacgctcaggccgaagagcagagag
ccggtggtgaaggatcgctcggagagggcggagactcgaagagagcacagccagtgtacc
agtaccagaaaccacactggtaccagaaaccacactgcccacagccacggcctcagagga
gcggcagaggaactacgcaaacaggtttccaaaatgaacggcctttcacgactgtctacc
gccggcgcgaacacagccgctgccaaaaagccgaaggactaccggctgccatccagaact
gtgaagtacacagccaccgtgaccaagggccacgtcacctacaccaaagcgaaaggagaa
ctggtgaagaaagccaaactcaaccacagcaggcactcttctgctgctgctgttggtggc
gcccataaagcaaacagcaccaatcaacaccaaccagccagcaacggccacggctcccag
cccccccactcaggaaaagcccaaagtagcaatgcaaaaacccgcagacaggtgctatta
tccaacggggtccacagcgaggccaacacccgcttcaactgccggctgaacggccgccac
agcatcaaggaggaggaggacaaaggaccgcagtggagacacaacctgcgcaactctaag
cgcaggatggacacatccgtggttacggaaccagagagcacagaggccaagtccagagtg
tccgtctctgaggctaagaaacctaagctgcagcctagccctctggtagaaacacgcagt
aaaaaagctctgggtcaggacaaagccacgagcgctctcactaacggacacaacatcaca
gagacggccgcttcccccactcaaaaaacgggtccttctgccccccctcctgcttcccct
gcagcccctggctcccctgctgcccaccagagccccgccaacccggagccagccagacag
cggcccaaacgagcctctgcaggcaaactaatgtttatcagacaagcacagcagagggct
cagaccagcgcggcctttagccgctacgctaacactacctcaaacagcaagccctccaaa
ccagcagagcccccaaccacacctcagccccagacgcgagtagacaaggagaaagaaaag
gagcgtgaaaaggagagagaaaaagagagggagcgaagtagggcaggattcgctgccctg
ccggacgttcccgtcttcaggcctaacgcccgggagttccaggaccccctgttgtaccta
gactctattcgagaaagggtggaaccctgcgggctctgcagggtcctgcctcccgcagac
tggaggcccgagtgcaaactgaacgacgagatgcgcttcgtcactcaggtgcagcgcatc
cacaaactggggcgccgctggggccagaatgtacagaagctcgcctgcatcaagaagcac
ctcaaatctcagggcatcaccatggaagaccctccagtcattggcggctgtgaggtggat
ctagcgcgattctcggagctggtgagtgatatgggcggcatgcagcaggtgatggacctg
aagaagtggaaccggctggccgacctgctccggatccccaggtcagcgcaggaccgactg
gccaagctgcaggaggcgtacctgcagtacctgctcagctacgaccagctgagccccgac
gagcagcggcagctggagcaggaggttctcaaggagaaggagatgctggaacgccgccgg
gggcccctggagggccactctgagaactcccagcgtaccctgacactgccccgctatgag
cccaaaaacggcctgactggactggccctccgaaacggcttccacaccgtggagccggaa
cccccgcggcaggccggccgccgcagactcttctctcaggaaaagaaaggggacaaagta
gatactcatcacgaagacaagatcaaggaggaggaagagcaggataaaggggttctcagt
gaccagcacaagtgtatatacaagggcagatcagtgtctttgactatcttctacagaata
gccaggaataccatgatgatgtgctttaacaaggagccaggagcatctgatgttgagcaa
gagtactggcgaatagtggatcagagggactgccatgtatcagtgcattatgggaaggtg
gacacgagcacacatggaagcggctttcccgtcggcaagtcggagcccttctcaaaacat
ggctggaacctcactgtcctccccaataactctggatccattctgcgccatcttggtgct
gtgcccggggtgactgttccctggctgaacattggcatggtcttttctacctcatgctgg
tctcgagaccaaaaccgccttccatatattgattacttacacactggtgctgattgcatt
tggtattctgttcctgctgaggagaagactaagcttgataatgtggtgcacacgctgctg
caggccaacggcactccaggactcgagatgctggagaagaacataatgatctctccagag
gtgctcagtcgtgagggtataaaagtgcatcgcacggtgcagcagagcggccagtttgtg
gtggttttccctggaacgtttgtgtccaaggtgtgttgtggttacagtgtgtctgagacg
gtgcactttgccaccccgcagtggatgaacgtgggctacgaggctgctaaggatctgaaa
tgcaggcgcatagccaagcccttctccatggagaagctgctctaccagatcgccacatcc
gagtccaaacgagagaacgcacttctgctgagtacaatctcctctctgctcaaagatctc
aggaacatagagatgaggcagcggcaggaactctacgaggccggcctgctctcttctgct
cgatacggcactcacgacagcaaccaacccacaggagagggcaggaagaaaccccgcaag
tggctggcgctggagtcgtccgagagacgctgccaaacatgccagcacctctgctacctg
tctatggtggtacaggagaatgagaatgtggtgttctgtctggaatgtgcactacactat
gtggagaaacagaaatcctgccgtggactgaagatgatgtaccgctatgatgaggagcag
attaacagtctggtgaatctggtgtgcggtaaagctctgaagaccacagtagagaactgt
aacggctccagccccgccaaaccgcctgccaagcgcggcccccgcaagagagccaccgtg
gaggtgtctctgacccacctgtccagccccgcccagctctccaaaagtgctgccacggcc
atctcatga

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