Astyanax mexicanus (Mexican tetra): 103026564
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Entry
103026564 CDS
T05042
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103026564 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103026564 (nup107)
03036 Chromosome and associated proteins [BR:
amex03036
]
103026564 (nup107)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103026564 (nup107)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103026564 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
103026564
NCBI-ProteinID:
XP_015457506
Ensembl:
ENSAMXG00000018121
UniProt:
A0A8B9GXJ9
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All DBs
Position
2:complement(23474927..23506016)
Genome browser
AA seq
920 aa
AA seq
DB search
MDWSQNWLNSPVVRDSEVTRAARRKSSHKKVAFPLAQDGSPSASMATPARALLTHTPGSL
FKQSFTPRSALKNPDVSAILGTGSRPSRFVNTPLPKGGVSMNLDDSDWTNSLYPSPLSVL
GDGSFTDEMNMSAVMLKEEDPGEAASVSLFPEFLQSYMRHSSSAVFDLLEDYETICQDKV
STLQKLVLRSASSQQKSSKTASITWLLQQEMVTWRLITSLYRDRIQTAMEDGMMMDITAP
SESEKTIMEQFFQRDSLVRQSQLVVDWLESIAKDDIGDFSDNIEYYAKSVYWENTLHTLK
LRRDQSSAGFSRPLVTELDPDAPIRQKRPLADLDREDDARLLRFLFTLIRAGMTDEAQRL
CKRCGQAWRAATLEGWKLYHDPNINGGGAELQSVEGNPHRCVWKVCCWRMAEEEQFNRYE
RAVYAVLSGNLRQLLPVCETWEDTVWAYFRVLVDSLVEQELRSSGMGHEDLEELPREYLE
ASWTMEKVFEELQATESKRVSDATKEHYHVIQKYIILGDLDGLMEEFSDWLGRSPPLPAH
LLRFMTHLVLFYRSLGMQLKEEVCVDVLKAYISLLVKEKQVELIAFYVSNLPADMAVSQY
AHFLEEVTETEQRKRCLELARQAGLDVAAVTKTVVEAVRERDSEEFSHHDLTPALDTGTT
VEDRQKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHDAAKLVFAKVPEDSMREIYR
QWEERGMNTPLPAEEENAIREHLCIRAYLEAHEAFNEWFRHMNSPPVKPTMPAQAKFTEK
VAFEMKEKEYKMEYENWQGRLDALTEEVKERIYNVLLFVDGGWMVDVREDAEEDSERSIQ
MALLRRLCLPMMTFLLLTVLQRTERHKESLRLADIIASDQHRLYEVFSKDELQKFLQKMR
ESSLLLLDKGLDPLGYELQS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggattggagccagaactggttgaactctcctgttgttcgagactcggaggtgactcga
gccgcacgcaggaaaagctcacacaaaaaggtggccttcccacttgctcaggatggatca
ccttcagcctccatggccactccagctcgagcactgctgacccacactcccgggtcactc
tttaaacagtccttcacccccagaagtgctctgaagaacccagatgtgtcggctattttg
ggaacgggaagcaggccgtcccgattcgtgaacacgccgcttcccaaaggcggagtcagc
atgaatctggatgacagtgattggacgaacagtctgtacccctctcctctctctgttttg
ggggacggcagcttcactgatgagatgaacatgagcgctgtaatgctgaaggaggaggac
cctggagaggctgcctcggtgagtctgtttccggagtttctgcagtcatatatgcgtcac
tcatccagcgcagtgtttgacctgctggaggactacgagaccatctgccaagataaggtg
agcactctgcagaagctggttcttcgctccgcctccagccaacagaaatcctccaaaacc
gccagcatcacctggctcctgcagcaggagatggtcacctggagactcattacctcactc
tacagggacaggattcagactgcgatggaggatgggatgatgatggatataactgctccc
agtgaaagtgagaagacaataatggagcagttcttccagagggacagcttggtccgacag
agccagctggtggtggactggttggagagcattgccaaagacgatataggtgatttctct
gataatattgagtactacgccaagtctgtgtactgggagaacacgctgcacactctgaag
ctgaggcgagatcagtccagcgcaggtttcagcaggccactggtgacagaactagaccct
gatgctcccatcaggcagaagaggccgctggctgatctggatcgggaggacgacgcccgg
ctgctccggtttctttttacactcatccgggcaggaatgacggacgaggctcagaggttg
tgtaagcgctgtggtcaggcttggcgtgctgccactttggaaggatggaagctttaccat
gacccaaacattaatggaggtggagctgagctgcagtcggtggaggggaatcctcacagg
tgtgtgtggaaggtgtgctgttggaggatggcagaggaggagcagtttaacagatatgag
agagccgtatacgcagtactgagtggaaacctccgacagctgctgccggtgtgtgagacg
tgggaggacacggtctgggcgtatttccgggtgctggtggattctctggtggagcaggag
cttcgttcctcagggatgggtcacgaggatctggaggagctgcccagagaatacctggag
gccagttggacgatggaaaaagtatttgaggagctacaagcaacggagtcaaagagagtt
tcagatgcgacaaaggagcactaccacgttatacagaaatacatcatcctcggagattta
gatggtcttatggaggagttcagtgattggctggggaggagtccgccgctgccggcccac
ctgctgcgcttcatgacacacctggtgctgttctaccgcagtctgggcatgcagctgaag
gaggaggtgtgtgtggatgtgctgaaggcgtacatctctctgttggtaaaggagaagcag
gtggagctgattgcgttttatgtcagtaatctgccggcggacatggccgtcagtcagtac
gctcacttcctggaggaagtgacggagacggagcagcggaagcgctgcctggagctcgct
aggcaagccggtctggacgtggcagcggtcactaagacagtggtagaggccgtcagagag
agagacagtgaggaattttctcaccatgatctcacacctgcactggacactggcaccaca
gtggaagatcgacagaagattgatgtgattgattggctggtgtttgaccccgcccagcgt
gccgaggctttgaagcagagcaatgccatcatgaggaaattcctggcctctaagaagcat
gatgctgctaaactggtgttcgccaaagtcccagaagattccatgagagaaatttaccgc
cagtgggaggagcgaggcatgaacacgccccttcccgctgaggaggaaaatgccattcgt
gaacacctctgtatacgggcttacctggaagctcacgaggcctttaatgagtggttcagg
cacatgaactctcccccagtgaaacccaccatgccagcccaggccaagttcacagagaag
gtggcctttgagatgaaggagaaggagtacaagatggagtatgagaactggcagggtcgt
ctggacgctctgacggaggaggtgaaggagaggatttataatgttctgctgtttgtggat
ggaggctggatggtggatgtgcgagaggacgctgaggaggactctgagcgctcgatccag
atggcgctgctgcggcgcttgtgtttgccgatgatgacgttcctgctgctgacggttctg
cagcgcaccgagcgtcacaaggagagcctccgcctcgccgacatcatcgcctccgaccag
cacaggctttatgaggtgttctccaaagatgagctgcagaagttcctgcagaagatgagg
gagtcgtctctgctgctgctggataaaggactggatcctctgggctatgagctccagtcc
taa
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