Astyanax mexicanus (Mexican tetra): 103026625
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Entry
103026625 CDS
T05042
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103026625 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103026625 (snx27a)
Membrane trafficking [BR:
amex04131
]
Protein recycling
Others
Others
103026625 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
103026625 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
VirE3
PDZ_2
USP7_C2
SNX17-31_F2_FERM
DarA_N
Motif
Other DBs
NCBI-GeneID:
103026625
NCBI-ProteinID:
XP_022538744
Ensembl:
ENSAMXG00000009816
LinkDB
All DBs
Position
3:28053760..28085545
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AA seq
560 aa
AA seq
DB search
MADTEGDESRPAATPPSLSAAQRNGPAAGPTTVASGPRIVRIVKSESGYGFNVRGQVSEG
GQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDLIRAG
EKELVLAVLSVPPQEVDGLDPGEDGSATPNYDYSDKQAVPISVPTYKHVEQHGERFVVYN
IYMSGRQLCSKRYREFAILNQNLKREFGTYTFPKLPGKWPFSLSEQQLDARRRGLEEYLE
RVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQAL
VMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFST
QEHDLLRDNPLALHYCFHQAQDDVKKGFIKAEDKSYQLQKLAEQRKMATYLSLLRTCEGY
NEVTFPHCSCDSRRKGHVISAIGIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGM
AFCFEYTRGEKKPRWVKIFTPYFNYMRECFERIFCELKWRKEVEEEASDKDNKNCSNNEY
LSPLEQQKGWRHLGGEIATS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgagggagacgagtctcggcccgcggctacaccgccgtctctcagcgcg
gcgcagcgcaacggacccgccgccggccccaccacagtggcgtccgggccccgcatcgtc
cggatcgtgaagtcggagtcgggctacggctttaacgtccgcgggcaggtcagcgagggc
ggccaactgcggagcatcaacggggagctgtacgctccgctccagcacgtcagcgccgtg
ttaccgggcggagcggcggaccgggcgggcatatctaaaggagaccggattctggaggta
aatggcgtgagtgttgagggtgcaacccacaagcaggtggtggatctgatccgtgcagga
gagaaggagctggtcctggccgtattgtctgtgccgccacaagaagtggatggcctcgac
ccgggagaggatggctctgccacgccaaattatgactacagtgacaagcaagcagtaccc
atctctgtccccacctacaaacacgtggagcagcatggagagagatttgtggtctataac
atctacatgtctggcagacagctgtgctctaagcgctatcgtgagtttgccatcctgaac
cagaacttgaagagagagtttggcacctacaccttccccaaactgcctgggaaatggccc
ttctccctgtccgagcagcagctggacgcccgcaggagaggactggaggagtacctggag
agagtgtgctcagtaagggtcattggggagagtgacattatgcaagagttcctgtcggag
tcagacgagaactataatggtgtgacggacgtggagttgcgaatagcactgcctgataag
accaccatttctgtgagagtacggaagaacagcaccactgaccaagtttaccaggcacta
gtgatgaaggttggcatggacagcatcatggccagttactttgccctctttgaggtcatc
aaccactcctttgttcgtaagttggcccctaacgagttcccccacaagctgtatgtgcag
aactacacctctgcagtgccaggaacctgcctggcccttagaaaatggctcttcagtacc
caggagcatgacctgctccgggataaccccctggctctgcactactgctttcaccaggct
caggatgatgtgaagaagggattcatcaaagccgaggataagtcctaccaacttcagaag
ctagctgagcagaggaagatggcgacatatctgagtctgctgcgcacgtgtgagggctat
aatgaagtcacgtttcctcattgctcgtgtgattcgcggaggaaaggtcacgtgatctca
gctatcggcatccaccactttaaactgcatgcttgcactgaggacggcacgttggagaat
caggttatagcgtttgaatgggctgagatgcagcggtgggacactgatgaggagggcatg
gctttctgctttgaatacacacgaggggagaagaaacctcgctgggtcaagatcttcact
ccatattttaactacatgcgtgagtgctttgagaggattttctgtgagctcaaatggaga
aaagaggtggaggaggaggcctcggacaaggacaacaagaactgcagtaacaacgagtac
ctctcccctctggaacaacaaaagggatggcgccacctagggggcgagattgccacctca
taa
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integrated database retrieval system