KEGG   Astyanax mexicanus (Mexican tetra): 103026625
Entry
103026625         CDS       T05042                                 
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
  KO
K17936  sorting nexin-27
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103026625 (snx27a)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:amex04990]
    103026625 (snx27a)
Membrane trafficking [BR:amex04131]
 Protein recycling
  Others
   Others
    103026625 (snx27a)
Domain-containing proteins not elsewhere classified [BR:amex04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   103026625 (snx27a)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 SNX17-27-31_F1_FERM RA_2 SNX17_FERM_C VirE3 PDZ_2 USP7_C2 SNX17-31_F2_FERM DarA_N
Other DBs
NCBI-GeneID: 103026625
NCBI-ProteinID: XP_022538744
Ensembl: ENSAMXG00000009816
LinkDB
Position
3:28053760..28085545
AA seq 560 aa
MADTEGDESRPAATPPSLSAAQRNGPAAGPTTVASGPRIVRIVKSESGYGFNVRGQVSEG
GQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDLIRAG
EKELVLAVLSVPPQEVDGLDPGEDGSATPNYDYSDKQAVPISVPTYKHVEQHGERFVVYN
IYMSGRQLCSKRYREFAILNQNLKREFGTYTFPKLPGKWPFSLSEQQLDARRRGLEEYLE
RVCSVRVIGESDIMQEFLSESDENYNGVTDVELRIALPDKTTISVRVRKNSTTDQVYQAL
VMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFST
QEHDLLRDNPLALHYCFHQAQDDVKKGFIKAEDKSYQLQKLAEQRKMATYLSLLRTCEGY
NEVTFPHCSCDSRRKGHVISAIGIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGM
AFCFEYTRGEKKPRWVKIFTPYFNYMRECFERIFCELKWRKEVEEEASDKDNKNCSNNEY
LSPLEQQKGWRHLGGEIATS
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggcggacaccgagggagacgagtctcggcccgcggctacaccgccgtctctcagcgcg
gcgcagcgcaacggacccgccgccggccccaccacagtggcgtccgggccccgcatcgtc
cggatcgtgaagtcggagtcgggctacggctttaacgtccgcgggcaggtcagcgagggc
ggccaactgcggagcatcaacggggagctgtacgctccgctccagcacgtcagcgccgtg
ttaccgggcggagcggcggaccgggcgggcatatctaaaggagaccggattctggaggta
aatggcgtgagtgttgagggtgcaacccacaagcaggtggtggatctgatccgtgcagga
gagaaggagctggtcctggccgtattgtctgtgccgccacaagaagtggatggcctcgac
ccgggagaggatggctctgccacgccaaattatgactacagtgacaagcaagcagtaccc
atctctgtccccacctacaaacacgtggagcagcatggagagagatttgtggtctataac
atctacatgtctggcagacagctgtgctctaagcgctatcgtgagtttgccatcctgaac
cagaacttgaagagagagtttggcacctacaccttccccaaactgcctgggaaatggccc
ttctccctgtccgagcagcagctggacgcccgcaggagaggactggaggagtacctggag
agagtgtgctcagtaagggtcattggggagagtgacattatgcaagagttcctgtcggag
tcagacgagaactataatggtgtgacggacgtggagttgcgaatagcactgcctgataag
accaccatttctgtgagagtacggaagaacagcaccactgaccaagtttaccaggcacta
gtgatgaaggttggcatggacagcatcatggccagttactttgccctctttgaggtcatc
aaccactcctttgttcgtaagttggcccctaacgagttcccccacaagctgtatgtgcag
aactacacctctgcagtgccaggaacctgcctggcccttagaaaatggctcttcagtacc
caggagcatgacctgctccgggataaccccctggctctgcactactgctttcaccaggct
caggatgatgtgaagaagggattcatcaaagccgaggataagtcctaccaacttcagaag
ctagctgagcagaggaagatggcgacatatctgagtctgctgcgcacgtgtgagggctat
aatgaagtcacgtttcctcattgctcgtgtgattcgcggaggaaaggtcacgtgatctca
gctatcggcatccaccactttaaactgcatgcttgcactgaggacggcacgttggagaat
caggttatagcgtttgaatgggctgagatgcagcggtgggacactgatgaggagggcatg
gctttctgctttgaatacacacgaggggagaagaaacctcgctgggtcaagatcttcact
ccatattttaactacatgcgtgagtgctttgagaggattttctgtgagctcaaatggaga
aaagaggtggaggaggaggcctcggacaaggacaacaagaactgcagtaacaacgagtac
ctctcccctctggaacaacaaaagggatggcgccacctagggggcgagattgccacctca
taa

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