Astyanax mexicanus (Mexican tetra): 103026658
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Entry
103026658 CDS
T05042
Symbol
plxna1a
Name
(RefSeq) plexin-A1
KO
K06820
plexin A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103026658 (plxna1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
Sema
TIG_plexin
PSI
PSI_PlexinA-B
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
103026658
NCBI-ProteinID:
XP_022533004
Ensembl:
ENSAMXG00000004133
LinkDB
All DBs
Position
13:6538299..6746616
Genome browser
AA seq
1899 aa
AA seq
DB search
MLRCRRGAPPSPIPRAFQLLLFLFSLCQRGEALESTLHSFQTLQTFQAFQTFAPAEGGLA
HMVIHNKTGEVYLGAVNWIYKLSSNLTKLRSHVTGPVVDNEKCYPPPGVQSCPYDLLQTN
NVNKLLLLDSGQNRLIACGSTSQGICQFLRLDDLFKLGEPHHRKEHYLSSVSEAGTMSGV
VVSGPQGISSGKLFVGTPIEGKSEYFPTLSSRKLMANEENADMFSFVYQDEFVSSQLKIP
SDTLSKFPMFDIYYVYGFNSEQFIYYLTLQLDTQLTSPDASAEQFFTSKIVRLCVDDPKF
YSYVEFPIGCTKDGVEYRLVQDAYLTRPGSKLARSLGISEREEVLFTVFAQGQKNRAKPP
KESALCLFTMRKIKEKIKERIQSCYRGEGKLSLPWLLNKELACINSPLQIEDNFCGQDFN
QPLGGTTTIEGIPLFLDKDDGLTSVAAYDYRGHTVAFAGTRSGRIKKIVVNSVYQPAQLY
ENVAVSEGNPILRDMLFSPNYLYIYTLTENEVSRVPVESCEQYTSCNECLGSGDPHCGWC
VLHNTCSRRDRCERSEEPLRFASHVGQCVKLSVQPNNVSVTMSEVQLVLQAQNVPSLSAG
VNCSFEDYTETEGHIVGGHIFCLTPTTRQIAPITRSKGDRHVMKVYLKSKETGKKFASVD
FVFYNCSVHQSCLSCVNGSFPCHWCKYRHMCTHDANDCSFQEGRVNTSEECPQIMPTTQI
HIPVGVIKPITLLAQNLPQPQSGQRNYECIFNIQGRVHSVTALRFNSTSIQCQKTMYDYD
GNDISDLPVELSVVWNGDFVIDNPYNIKAHLYKCYALRDSCGMCLKADPRFDCGWCVQEK
KCSLRQECAPAESTWMHPSISNSRCTHPKITKLFPETGPRQGGTRLTITGENLGLQFTDI
QNGVRLGKVPCIPVEEEYISAERIVCQINDATGYRVQEAQVEVCVRDCLPDYRALSPRGF
TFVTPFFTRVQPSQGPLSGGTRITIEGNHLNAGSLVTVNIGRQPCRFKKRSAKEIVCVTP
AGGNPGSTPVMVDIDAAELRNPEVKFNYTEDPTVLHIEPDWSIASGGIPLTVSGTNLATI
KEPKIRAKYGTAESFHNCTVYNNSVMVCLAPSVAHSERGIAESGSRPDEIGFYMDDVDAL
IVVNESFSYFPDPVFEPLSPTGVLELKPASPLILKGRNLFPAAPGNSRLNYTVLIGETLC
VLTLSETQLLCEWPNLTGQHKVTIQAGGFEYSPGTLQIYRDGLLTLPAIVGIGGGGGLLL
LVIIFVLVAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTQELDGA
GIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQADMEKALALFGQLLAKQHFLLTFIRTLEA
QRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIDRNLESKNHPKLLLRRTESVA
EKMLTNWFTFLLYKFLKECAGEPLFMLYCAMKQQMEKGPIDAITGEARYSLSEDKLIRQQ
IDYKTLTLHCVNPENESAPEVSVKCLNCDTITQVKEKLLDAVYKGSPYSQRPKAGDMDME
WRQSRMARIVLQDEDVTTKIDNDWKRLNTLSHYQVTDGSVIALVPKQNSAYNICNSSTFT
KSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHSDQREGDRSSKMVSE
IYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQITDADVR
HTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPS
NKLLYAKDIPNYKSWVERYYADISRMPTISDQDMSAYLAEQSRLHVNQFNSISALHEIYS
YIIKYKDEILSALQKDEQARRQRLRSKLEQVIDTMALSS
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtgcaggaggggggctcccccctcaccaatacccagggccttccaactccta
ctcttccttttttccctctgtcaaaggggtgaagcgttagaatccaccctgcactccttc
cagaccttgcagacgttccaagcgttccagacgtttgcccctgccgagggtggacttgct
cacatggtcatccacaataaaacgggtgaggtttacttgggtgccgttaactggatctac
aagctctccagcaacttgaccaagctgcgtagccatgtgaccgggccggtggtcgacaat
gagaaatgttaccctccgcccggagtccagtcctgcccgtacgatctcctacaaaccaac
aacgtcaacaagcttctgctgctggactcagggcagaaccggcttattgcctgcggaagc
acatcacaaggcatctgccaatttctgcgattggacgacctctttaagctgggtgaacct
caccatcgcaaggaacactacctctccagtgtgtccgaagcaggtaccatgtctggagtg
gtggtcagcggcccccagggtataagcagcggtaaactcttcgtaggaacgcctatcgaa
ggcaaatcggaatacttcccaactctttccagtcgcaaactgatggccaacgaagagaac
gctgatatgttcagctttgtgtatcaagacgaattcgtctcctcacagctaaagatccct
tcggatacactctccaagttccccatgtttgacatctactatgtttatggtttcaacagc
gagcagttcatctattacctgacccttcagctggacacgcagctcacgtcccctgacgca
agcgccgagcagttttttacctctaagatcgtacggctttgcgtggacgaccccaagttt
tactcgtatgtggagttccccatcggatgcaccaaggacggagtggagtaccggcttgtc
caggacgcctatcttaccaggcctggttccaaactggcgaggtcgctcggtatctccgag
cgggaggaggtgctgttcaccgtgttcgctcagggccagaagaacagggccaagccgccc
aaggagtcggccttgtgcctgtttaccatgcgcaaaatcaaggagaagatcaaggagcgc
attcagtcctgctaccggggcgaaggaaaactgtccctgccctggctgctcaacaaggag
ctggcctgcatcaattcacctctgcagatcgaagacaacttctgcggtcaggactttaac
caaccactgggtggaaccaccaccatcgagggaatcccgctctttctggataaggatgat
ggactgacctcggtggcggcctatgactaccggggacacactgttgctttcgctggaacc
cgtagcggcaggattaagaagatcgtggtgaactccgtctaccagccggctcagctgtat
gagaacgtggctgtgagtgaaggaaaccccattctgagagacatgctcttcagccccaac
tacttgtatatatacacccttacagagaacgaggtgagcagggtgccggtagagagctgt
gagcagtataccagctgtaatgagtgtctgggatctggagacccccactgcggctggtgt
gttttacacaatacatgttcccgtagagaccggtgtgagagatctgaagagcccctgcgc
tttgcttctcatgtggggcagtgtgtcaaactcagcgtccaacccaacaacgtctcagtc
accatgtctgaagtgcagctggtgctgcaggcccagaacgtacccagtctgtctgcggga
gtgaactgctcgtttgaggattacacagagaccgaggggcacatcgtcgggggacacatc
ttctgtctcactcccaccacgcgtcagatagcccccatcacacgcagcaagggtgacagg
catgtaatgaaagtttacctgaagtcgaaagagacggggaagaagttcgccagtgtggat
ttcgtcttctacaactgtagtgtccaccagtcatgtctctcctgtgtgaatggctctttc
ccctgccactggtgcaaatatcgccacatgtgtacccacgacgccaacgactgctccttc
caggagggcagagttaatacgtcagaggagtgtcctcagatcatgcccaccacgcagatc
cacatcccagtgggtgttataaagcccattaccctgctagcccagaaccttccgcagcca
cagtcgggtcagaggaactacgagtgcatctttaacatccagggcagagttcacagtgtc
accgctctgcgctttaacagcaccagcatacagtgccagaagaccatgtatgactatgat
ggcaatgacatcagtgatctgccggtggagctgtcggtcgtgtggaatggagactttgtc
attgacaacccttacaatattaaagcacacctgtataaatgctatgctctgagggacagc
tgtgggatgtgtctgaaggctgacccgcggttcgactgcggctggtgtgttcaggaaaag
aagtgctctctcagacaggagtgcgctccggcagaaagcacctggatgcaccccagcatc
agcaacagccgctgtacacaccccaaaatcaccaagttgtttccagagacgggtccacgg
cagggcggaacaaggctcaccatcactggagagaacctgggtttgcagttcacagacatc
cagaacggagtccggctgggaaaggtgccatgcattcctgtagaggaggagtacattagt
gcagagaggattgtgtgtcagataaacgatgctacagggtaccgtgtgcaggaggctcag
gtagaggtgtgcgtcagagactgtctaccagactacagagcactgtcaccacgaggattc
acttttgtgaccccgttcttcactcgagtgcagccctctcagggtcctctctctgggggc
accaggatcaccattgagggaaaccacctgaacgctggcagcttagtgaccgttaacatc
ggtcgccagccttgtcgctttaagaagcggagtgctaaagagatcgtatgtgtgactcca
gcgggggggaacccaggaagcactccggtgatggtggacatcgatgctgcagagttacga
aaccctgaagtgaagttcaactacacggaagaccctacggttctgcacatagagccggac
tggagcatcgccagtggtggaattcctctgaccgtcagtggtaccaatttggccaccatc
aaagaacccaagattcgagccaagtatggtactgctgaatctttccataactgcacagtc
tataataactcagtcatggtgtgcttggcaccgtctgtggctcactctgagcgaggcatt
gcggagagcggcagcagaccggacgagatcggtttctacatggacgacgtcgatgctctg
atagtggtgaacgagagcttcagctacttccctgatcctgtgttcgagccgctcagtccc
accggcgtcctggagttaaaacctgcctctcctctcatactcaagggtcggaacctgttt
ccagcagcgccgggaaactccagactgaattacacagtgctgatcggagagacgctgtgt
gttctgaccctgtctgagactcagctgctgtgtgaatggcctaacctcacaggccagcac
aaagttaccatccaggcaggagggttcgagtactccccaggcacactgcagatctatcga
gacggcctcctcaccctgccagcgatcgtggggatcggaggaggtggaggactcctcctg
ctggtgatcatctttgttctggttgcgtataaacgcaaatctcgagacgccgaccgcact
ctgaagcggctgcagctgcagatggacaacctggagtccagagtggccctggagtgcaaa
gaagcgttcgcagagctccagaccgatatccatgaattaactcaggagctggacggagct
ggaatacctttcctggactacagaacatacgccatgagagtactatttcctggcatcgag
gatcacccagtgctcaaggagatggaggtgcaggctgatatggagaaggctctggctttg
ttcggtcagctcctggctaagcagcacttcctgttaacgtttatccgcactctggaggca
cagcgctccttctccatgcgagaccgaggcaacgtggcctccctcatcatgaccgctctg
cagggggagatggagtacgctacaggagtcctcaaacagctgctgtcagaccttatagac
agaaacctggagagcaagaatcaccccaaactgctgctgcgcagaacagaatctgtggct
gagaagatgcttacaaactggtttaccttcctcctgtacaagttcctaaaggagtgtgct
ggggagcctctgtttatgctgtactgtgctatgaagcagcagatggagaaaggccctata
gatgccatcacaggagaggctcgctactccctcagcgaagacaaactcatccgtcagcag
attgactataaaacactgactctgcactgtgtgaacccagaaaatgagagcgctccagag
gtgtctgtgaaatgcctgaactgtgacaccatcacacaggtgaaggagaagctgttagat
gctgtgtataaaggaagtccctactctcagagacccaaagctggagacatggatatggaa
tggcggcaaagcagaatggccagaattgttctgcaggatgaggacgttactactaaaatc
gataatgactggaaacgactaaacactttatcacactatcaggttacagatggatcagtt
atcgctctggtgccgaagcagaactcggcctacaacatctgcaactcctccaccttcacc
aagtcactcagcagatatgagagcatgctgagaacagcgagtagtccagacagcctccgc
tccagaacaccgatgatcacccctgatctagagagcggcaccaaactctggcacctcgtc
aaaaaccacgaccactcagaccaaagagagggggatcgaagcagcaagatggtttcagag
atctacctgacacgacttttagctactaagggtacgttgcagaagttcgtagatgacctg
tttgagacgatattcagcacggcgcaccgcggcagcgccctccccctcgccattaaatac
atgtttgacttcctggatgaacaggcagacaaacaccagatcacagacgcagatgtgcgg
cacacgtggaagagtaactgtttgcctttgaggttttgggtgaatgtgatcaagaatcct
cagtttgtgtttgacatccacaagaacagcattacggacgcctgtctgtctgtggtggcc
cagactttcatggactcatgttctacttcagaacacaaactgggcaaagactcgccttct
aataagctgctctatgctaaagacatccccaactataagagctgggtagagagatattat
gcggatatctcccgcatgccgaccatcagtgatcaggatatgagtgcgtatctggcagag
cagtctagacttcacgttaaccagttcaacagcatcagcgctctccatgagatttactct
tacatcatcaaatacaaagatgagatcctctctgcactacagaaagatgagcaggctcgg
aggcagaggctgcgcagcaaactcgagcaggtcatcgacaccatggctctgtccagctga
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integrated database retrieval system