KEGG   Astyanax mexicanus (Mexican tetra): 103026700
Entry
103026700         CDS       T05042                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
  KO
K06245  laminin, beta 4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
amex04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103026700 (lamb4)
   04518 Integrin signaling
    103026700 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103026700 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB1 LAMB4 DUF7630 Syntaxin_2 ATP-synt_F6 F5_F8_type_C DUF7441
Other DBs
NCBI-GeneID: 103026700
NCBI-ProteinID: XP_022527960
Ensembl: ENSAMXG00000000803
LinkDB
Position
2:complement(55340518..55384010)
AA seq 1829 aa
MAQEDISTLLLLMLLVPVQLQDNCNGGSCHPNLGDLMVGRAAQLSATSTCGMNGPQNYCI
LGYLEDEQKCFNCDSRSPYDRHNNHHSHRIENIITTFEPERKMKWWQSENGVQRVSIRLD
LKTVFQFSHLVLTFKSFRPAAMLVERSKDFGRTWKVFRYFSADCANDFPGVSQGPAESID
DLICDSRYSGSEPSTDGEVVLKALDPNFHIYDPYDPTIQDLITMTNLRLNFTRLFTLGDN
LLVRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCMPVYSTRGDTFTEPDMVHGRCVCQH
NTIGDNCEKCQDFYNDAPWRPAGNSDPHVCKKCNCNGHSERCHFDLNRYMATGQVSGGVC
EDCRNNRIGAQCEQCQPGYYRDPQRPIEDPAACIPCACHSAGSVDGGLCDPVSGRCVCKQ
NVEGERCDRCISGFFGLSQGDNSGCQRCRCNSLGSKSTSPCDQTTGQCICEDFAHGPECD
QCVAGYWGLGNTVYGCLPCDCDVGGAFSTVCLSVSGQCQCRANMIGLSCSEPAPGYFLAP
LDFYLYEAENAAPLETKCSYYLVWPTTPPVPHTAPTASRPTPRPYCSPGTPAHKPPPTPY
PTIHFETPSPAPPTEPPTLPRCEQYFRSRGYEFTLSDGKFVVVKRERRQSRKRRQSQRTI
SLQPGSSHQIIFRPHTPDVTVTWTGPGFVRVQNGAGLRFAVTNIPLNLNYHFVIRYEAES
TDDWTATVKVVPLGLYDENCPYDSSEKTVTLLSTRRAATLDTPVCLSSGVRYYVDITFER
QSTPDPYCRSHILIDSMGLIPKIESLPNFCSERALAEYQQYQCVELVERAGEHTLPEVCE
QLVSSMSAYIHNGAIACKCNPEGSFSSSCSKFGGQCDCKPNVIGRCCDTCAPLTYGFGPN
GCSACNCEPSGSKAEVCDHRTGQCPCRNEVTGQRCDRCLPGYFGFPNCKRCQCNGLADLC
DPVTGLCLNCKEHSTGPHCERCVEGYFGDPVSRETCLPCRCPDVKGSGRFFARSCTKDPN
ALVPTCECEEGHQGFQCDSCAPGYYGNLLLPGARCTECPCNNNIDPGDGEACDAVSGECL
HCLHNTHGPNCQTCKPGYYGNALLQDCRECTCDRLGAELTRCPPDGPCFCDAVTGQCPCR
TGVVGVLCDQCEDGYWNLHSGCVPCNCNSQHSLSKLCDKITGQCSCEREYGGKQCDQCAE
NHFGNPDIQCISCDCNMEGTVFPGCDPYTGECMCRPGVSGIFCDECSPGHNPAFPACEPC
HACSLLWEKKVTDITKAVAEMASLPRPPNVNDVRLQKWMQELEEKLNNLVNMLGRDQNEL
GAIEKLMNLIRNMIETIDPHTIIIDPSQLLNNEIGNIHQEFKRLLEGLKRKLEDGPKLDL
KALNGTLEKIRKLHADFMKDEEKVKEAKGILDASRQIRQDTKEELAKCQRRPLDILEKKV
KALSVAGLNEEICGAPGDVECEKAKCGGALCGTCGGPSCTGSSPLSKDALDTAERTERGI
RDLLRNLTEADTKMNKVKNVTESVKDKAQEMMNKITNSKNIFEKEKKSTKDLIIRVREYL
TEDSMEPDDIDTLASAVLAIKLPSSPDEIKKMIQEIQNILGNMTDFKENLKPLLEQTEVA
KNITQQAEEILNKTKQMNVSEIEQNLRDTVKLHGKIQKDLNKSEDNMNVTTDKLNQSTSK
LKNAEDNLKTTQTKQLRDKIEALKNKTEMNQVQAVEAKAAADAALANATDANKDLQKVIE
QFKNLTEKNQTQSNNGEANERLNRIKMEAEKMAKDIENKLKQIEDLEKRILDAARNKEEK
MAELEFLQREAEALGKFIDQVVLKYLYCT
NT seq 5490 nt   +upstreamnt  +downstreamnt
atggcccaagaggacatatctacactgctgcttctcatgttgctggttcctgtccagctt
caggacaactgtaatgggggttcgtgccaccccaacctgggtgatcttatggtgggccgt
gctgcccagctgtcagccacatccacctgtggtatgaatggtcctcagaactactgcatt
ctgggatatctggaggatgaacagaagtgcttcaactgtgactctaggagcccctacgat
cgacacaacaaccaccacagccaccgaatagaaaacatcatcactactttcgaacctgaa
cgtaagatgaagtggtggcagtctgagaacggtgtgcagcgagtcagcattcgcctggac
ctcaagactgtgtttcagttcagccatttagtcctgaccttcaagagctttcgaccagct
gcaatgctggtggagaggtctaaagattttggacgaacttggaaggtgtttcgatacttc
tctgcagactgcgctaacgacttccccggggtttcacaaggcccagcagagagcatcgac
gacctcatctgcgacagccgctactccggatctgaaccctccactgatggagaggtggtg
ttaaaagctttggaccccaactttcacatctatgatccatatgatcctaccattcaagac
ctcatcaccatgactaaccttcggctgaacttcacacgtctattcacgctgggagataac
ttgctggtgcggcggaggaggaaccctcaggataagtactactacgctctctatgaaatg
gtggtcagggggagctgcttctgcaatggccatgccagccagtgcatgccagtttacagc
acgcgtggagataccttcactgagcctgacatggttcacgggcgctgtgtgtgtcaacac
aacaccattggggacaattgcgagaagtgccaggacttttacaatgatgccccctggagg
ccagctggaaacagtgacccacatgtctgcaaaaagtgtaactgcaacggtcactcagag
cggtgtcattttgacctaaaccgttacatggccactggacaggtcagtggtggggtgtgt
gaggactgcagaaacaaccgcattggagctcagtgtgagcagtgtcagccaggctactac
agagaccctcagcgccctatagaagatccagcagcctgcataccatgcgcctgtcactca
gcagggtctgtggatggtggtctgtgtgatccagtgagtggccgctgtgtttgcaagcag
aatgtagagggtgaacgctgtgaccgatgcatatcaggcttctttggtctcagtcaggga
gataacagtggctgtcagagatgtaggtgcaactccttgggcagcaagagcacttcccca
tgtgaccagacaacaggccagtgcatctgtgaagactttgcccatggaccagagtgtgat
cagtgtgtggcaggatattggggtttaggaaatacagtatatggctgcttaccttgtgac
tgtgatgttggaggagctttcagcactgtgtgcttgtcagtaagtgggcagtgtcagtgc
agagctaatatgattggactcagctgcagcgagcctgcacctggttactttctggcacct
ctcgacttctatctgtatgaggctgaaaacgctgctcctctcgaaaccaagtgctcctat
tacctggtgtggcccaccactccccctgtaccacacacagctcccacagcatccaggcct
actccacgtccgtactgcagcccaggaaccccagctcataaacctcctcctaccccttac
ccaactattcactttgagacaccatctccagcaccccccacagaaccccccactctgccc
agatgtgagcaatacttcaggagcaggggatatgagttcacgctaagcgatgggaagttt
gtggtggtgaagcgcgaaaggagacagagtcgaaagagaagacaaagccagaggaccatt
tccctgcagcctggatcttcccatcagatcatatttcgaccacatactccagatgtaact
gtgacttggactggaccaggatttgtgcgagttcaaaatggagcaggcctcagatttgct
gtcaccaatatcccattaaatcttaactaccatttcgttattcgctacgaggcagagtcc
acagatgactggacagctactgtgaaagtcgtacctttaggactttatgatgaaaattgc
ccgtacgactcgtctgagaaaacagtcacgcttctcagcacacggagggcagccactttg
gatactccagtgtgcctcagctccggcgtgcggtattacgtggatatcacttttgagaga
caatccactccagatccgtactgcagatcccacattctgattgattccatgggacttatt
ccaaagattgagtctcttccaaatttctgctctgagcgagctctggctgagtatcagcag
taccagtgtgtggagctggtagaacgtgcaggagaacacaccctgccagaggtgtgcgaa
caactggtttccagcatgtcggcctatatacataatggtgcaattgcttgcaaatgtaat
cccgaagggtcctttagctcctcttgcagtaaatttggaggacagtgtgactgcaaaccc
aatgtgattggccgctgctgtgacacctgtgcccccttgacgtatgggtttgggccaaat
ggctgctcagcatgtaactgtgagccttcaggctccaaagcagaggtatgtgaccacagg
accggacagtgcccttgtcgtaatgaagtcacgggccagcgttgtgaccggtgcctgcct
ggatacttcggttttccaaactgtaaacgctgtcagtgcaatggactggctgacctctgt
gaccctgttactggattgtgtctgaattgtaaggaacattcaactggaccccactgtgaa
aggtgtgttgaggggtactttggggaccctgtctcaagggagacctgtctgccatgccgg
tgtccggacgtaaagggcagtgggcggttcttcgcccgctcctgcaccaaggacccaaat
gctttagtcccgacttgcgaatgcgaggaagggcatcaaggtttccagtgtgattcatgt
gctccgggttattatggtaacttgttgttgccgggagcgaggtgcacggagtgtccctgc
aacaataacattgaccctggtgatggcgaggcgtgtgacgctgtgagcggagagtgtctc
cactgcttacacaatactcacgggcccaactgtcagacttgcaaacctggttactatggc
aacgccctactccaggactgccgagagtgtacctgtgatcgtctgggggcggagttgact
aggtgcccgccggatgggccgtgtttctgtgatgctgtgactgggcagtgcccgtgccgc
actggtgtggtgggagtgctgtgtgatcagtgtgaggacgggtactggaacctgcactca
ggctgtgtgccctgtaactgtaactcacagcactctctcagcaaactgtgtgacaagatt
acaggccagtgttcctgtgagagagaatacggtggcaagcagtgtgaccaatgtgcagag
aatcactttggaaacccagacattcaatgcatatcctgtgactgtaacatggagggcacc
gtcttccccggttgtgatccgtacactggtgagtgtatgtgtcggcctggagtgagcggt
attttctgtgatgagtgttctccagggcataacccagccttccctgcctgcgagccctgc
catgcctgttccttactctgggaaaaaaaggttactgacatcactaaggcggttgcagag
atggcttctttacctcgtccacctaatgttaacgacgtacggctccagaaatggatgcaa
gaattggaggagaaactgaacaacctggtcaacatgcttggccgtgatcagaatgagctg
ggtgccatagagaagctcatgaatcttatcagaaacatgatagaaaccatagatccacac
actatcattattgatccatctcaactgctgaacaatgaaattggtaacattcatcaagag
ttcaagaggctactggagggcttgaagagaaaactggaagatggcccgaaactagatcta
aaagcactgaatggcaccctggagaagatcagaaagctccatgctgacttcatgaaagat
gaagagaaggtgaaagaggctaaaggcattttggacgcctccaggcagatccggcaggac
actaaggaagagctggccaaatgccagcggaggcctttagacatactggagaagaaggtc
aaagcactcagtgtggccggactgaatgaggagatctgtggagctccaggtgatgtagag
tgtgagaaggcgaagtgtggaggtgctctgtgtgggacgtgtggtgggccgtcttgtaca
ggcagttctcctctcagtaaagatgccctggacacagcagagagaactgagagaggcatc
cgagacctgctccgaaacctcacagaggcagatacaaagatgaacaaagtcaaaaatgta
actgaaagcgttaaagacaaagcacaggaaatgatgaacaaaatcaccaacagtaagaac
atatttgaaaaggagaagaaaagcactaaggacctgattatccgggtcagggaatacttg
acagaggactcaatggaacctgatgacattgacacgttggcctctgctgtgttggctata
aagctgcccagctcaccagatgagatcaagaagatgatccaggagatccagaacatcctg
gggaatatgacagattttaaggagaatttgaaacccttgctggaacaaactgaagtagct
aaaaatataacacagcaggctgaggaaatcctgaacaaaactaagcagatgaatgtcagt
gagatcgagcagaatctgagggatactgtcaagcttcacggcaagatccagaaagaccta
aacaagtctgaagacaacatgaatgttaccactgataaactgaaccagagcacatctaaa
ctcaagaatgctgaagataatttgaagacgacgcagaccaaacaactacgagacaaaatt
gaggctttgaaaaataaaactgaaatgaatcaggttcaggctgtggaggcaaaagctgct
gctgatgcagcgttagccaatgccacagacgctaacaaggatcttcaaaaagtaatagaa
cagtttaaaaacctgacagagaaaaaccaaactcaaagcaataatggtgaagccaatgag
cgcctgaacagaataaagatggaagcagaaaaaatggcaaaagacatagagaataaactc
aaacaaattgaagatctagagaaaagaattctggacgctgcacgaaataaagaggagaaa
atggccgagttagagtttctccagagggaggcagaagcattggggaaattcattgatcaa
gtagtgctgaaatatttgtattgcacttag

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