Astyanax mexicanus (Mexican tetra): 103026856
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Entry
103026856 CDS
T05042
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103026856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103026856
03036 Chromosome and associated proteins [BR:
amex03036
]
103026856
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103026856
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103026856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
103026856
NCBI-ProteinID:
XP_049328361
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Position
25:27060978..27083498
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AA seq
1218 aa
AA seq
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MDDPVKSMCEQLIKAVNVMMDPDSSHQYRQEALKFCEDFKEKCPFCVPCALQLADKSQTP
VVRHFGLQTLEHVIKFQWNNMPQQDKVHLKNCSMELLSCGTYPILEEESHIKDALSRIVG
EMIKREWPQQWPDMLTEMETLTSYGETQTELVMLILLRLAEDVITFQTLPTQRRRDIQQT
LTQNMGNIFTFLLAILQQQVDAYRRLKVVPGQDVKARAHCRVAITTLNTLAGYIDWVALF
HITNENCQLLEILCLLLSEAELQLEAAECLLIAVSRKGKLEERKPLMVLFEDVAMHYILS
AAQSADGAKTNGDQPAGSGLDEKKYIFLKRLCQVLCALGGQLCALVGSAVETKVPANLNK
YMEAFLAFTTHPSQFLRSSTLTTWASIFRHEVLSKDPTLVQMSAKYMKTTMTNLVKTGFP
SKNDNPSCEYSRVDFDCDEDFITFFNAFKAQQGEVVRQACKIAPFEAFQIAAEWLQYQIS
APIDAGNAPAKADGLCTVLSPSVVQWEAMTFFLESVIGQLFKVLEKEKLPVEQGMELLQA
VMKYETRDPLILSCILSSLSALFPFVLDRPEFLPQVFFKMFPAITFELAEGSKAPRTRSV
KNVRRHACSSVIKMCRMYPEYILPYFDMLYTQVKDLFVNEMLLTQMEKCAMVEALVLLSN
QFKDYEKQRVFLEELMAPVSARWLSEELHSILWDPVSFLSFVGADRVVTDPSDEDLMGLN
RSRISFCVYTILGVVKRARWPDDLEEAKAGGFVVGYTSTGAPIYRNPCKDPVLALLPNLL
AFMRTLNSLFLPENVARLSETFSRAYEVLDVEKNLILSISQPTVDVYDTPVYKSSVERLQ
GFFCALYDNSYHIIGHSGTALQQDFYTIDGLAEKLVSSTLVHLEHVPYHRLRPLLRMFMK
PLVTSCPPEYYAGVICPVLGVLFTHLLQRLISRWQVINQRTAEFGPEDEDECSEESQVTQ
EMLEDQLVRLATREVMDLLYVSCISRKCPEAAGNKEDADGDEEMMATDSSHLNAPQTSDE
LTELGKCILKNEDMYMTLLTLSFHSLSWRDTANCQRVASQFCWALLRQVIWRSLVPEAVT
WVYVSVLKALQMHGQHDGCNAALTQLALLIYDALRPRYAELRTVMNQIPNIHPEQMEQFD
QRTLNPTLQKIGEKKRKDQFKKLIAGTVGKPLGQQFKKEVHFRNLPSLFKKVKPSKDIVA
NSENSGLVSLFTPEHEEN
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggatgatccggttaaatcgatgtgtgaacagcttattaaggctgtgaacgtgatgatg
gacccggactcctcgcaccagtatcgccaggaggccctgaagttctgtgaggattttaag
gagaagtgtccgttctgtgtgccgtgtgctcttcagctggctgataaatcccagacgccg
gtggtgagacacttcggtctgcagacgctggaacacgtgataaagttccagtggaacaac
atgcctcaacaggacaaggtccatctgaagaactgctccatggagctgctgtcatgcgga
acctaccccatcctggaggaggagagtcatattaaagacgctctctcgcggatcgtgggg
gagatgataaagagggagtggcctcagcagtggcctgatatgctgacggagatggaaacg
ctcacttcatacggggagacacagacggagctggtgatgctgattctcctgcgattggct
gaagatgtgataacgttccagactctgcccacgcagcgacggagggacatccagcagact
ctcacgcagaacatgggaaacatcttcaccttcctcctcgccatcctgcagcagcaggtg
gacgcgtaccgcagactgaaagtagttccaggtcaggatgtaaaggccagagctcactgt
cgggttgccatcaccacgttaaacaccctggcgggctacatcgactgggtggcgctgttc
cacatcactaatgagaactgccagctgctggagatcctgtgtctgctgctaagcgaggcg
gagctgcagctggaggcggccgagtgtctgctcatcgccgtcagcaggaaggggaagctg
gaggagaggaagcccctcatggttctgtttgaagacgtggccatgcactacatcctgtct
gctgctcaatctgcagatggtgctaaaactaatggtgatcaaccagcaggatcaggactg
gatgagaagaagtatattttcctgaagaggctgtgtcaggttctctgtgcactcggaggg
cagctctgtgctctagtgggttcggctgtagaaaccaaggttcctgcaaacctgaataaa
tatatggaagctttccttgccttcaccactcatcccagccagttcctgagatcttccacg
ctgaccacctgggcgagcatcttcagacacgaggtcttatctaaggacccgacgctggtg
cagatgtccgctaaatacatgaagacgaccatgaccaacctggtgaagactggattcccg
tctaaaaacgataacccgtcttgtgaatactcccgcgtggactttgattgtgacgaggac
tttattaccttcttcaacgcgtttaaggcccagcagggagaagttgttcgtcaggcctgt
aagatcgctccgtttgaagcgtttcagatcgccgcagaatggttacagtaccagatcagc
gctcccatcgatgctggaaacgcccccgctaaagcagacgggctgtgtacggtgttgtcg
ccctcggtggtccaatgggaggccatgaccttctttttggagagtgtgattggtcagctc
tttaaagttctggagaaagagaagcttcctgtggagcagggcatggagctcctacaggcc
gtaatgaagtacgagacccgagacccgctcatactgtcctgcatcctcagcagcctctcc
gccctctttcccttcgtcttagatcgaccagagttcctgccgcaggtgttctttaagatg
tttcccgccatcacgtttgaattggctgaaggaagtaaggctcctcgaacccgatctgtg
aagaacgtcagacgacacgcctgctcctccgtcatcaaaatgtgcagaatgtacccggag
tacatactaccgtactttgacatgctctacacccaagtgaaggatctgtttgtgaatgag
atgctgctgacgcagatggagaagtgtgcgatggtggaggctctggttctgctcagtaat
cagtttaaggactatgagaagcagagggtgtttttggaggagctcatggctccggtctcg
gcccgctggctctccgaggaactgcacagtatattgtgggatcctgttagtttcttgtcg
ttcgttggcgcggaccgagtcgtcacagatcccagtgatgaagatctgatgggactcaac
agatccaggatcagtttttgcgtgtacaccatcctcggagtggtgaagcgagcgcgctgg
cccgatgatttagaggaggccaaagctggaggctttgtggtgggctacacttccactgga
gcccccatctacaggaacccctgcaaagacccggtgctcgccctgctgccaaacctactc
gccttcatgaggactctaaacagcttgttccttccggagaacgtggctcgactcagtgag
acctttagtcgggcgtatgaggtcctggacgtggagaagaatctaattttgtcaatttct
cagcctaccgtggacgtgtacgacactccggtgtacaaaagctcagtggagcgtctgcag
ggcttcttctgcgctctgtatgataacagttatcatatcatagggcattctgggacggcg
ttgcagcaggatttctacactattgatggtcttgcggaaaagttagtgagctcaaccctc
gtccacctggaacacgttccttaccatcgactccgccccctactccggatgttcatgaag
cctctggtgacgtcctgtcctccagagtactacgccggtgtgatctgtcctgtactgggc
gtcctgtttactcacctgcttcagagactgatctcccggtggcaggtcatcaaccaaaga
accgctgaatttggtccagaggatgaagatgagtgcagtgaggagagtcaggtgactcag
gagatgctggaggatcagctggtgcgattggctaccagagaggtcatggatctgctctac
gtgtcgtgcatatcaagaaagtgtccagaagcagctggaaacaaggaggatgcagatgga
gatgaggagatgatggccacggattcttctcatcttaatgcgccccagacctcagatgag
ctcacagaacttggcaaatgtattctaaaaaacgaggacatgtacatgactctcctgacc
ctgtccttccactccctgtcctggagggacaccgctaactgtcaacgggtggcttctcag
ttctgctgggctttgctaagacaggtaatttggaggagtctggtaccggaggcggtgacg
tgggtctacgtcagcgtgctgaaagctctgcagatgcacggtcagcatgacggctgtaat
gctgcgctaacccagctagccttgctcatctacgacgctctgcggcctcgatacgcagag
ctgcgcaccgtcatgaaccagattcccaacatccacccggagcagatggagcagtttgac
cagaggactctgaaccctacactgcagaagatcggagaaaagaagaggaaagaccagttt
aagaagctcattgctggaactgtggggaaacccctggggcagcagtttaagaaggaggtc
cacttccggaaccttccatcactgtttaagaaggtgaaaccttcaaaagacattgtggcc
aatagtgaaaattctggattagtgagtctgttcacacctgaacacgaagaaaactaa
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