Astyanax mexicanus (Mexican tetra): 103026945
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Entry
103026945 CDS
T05042
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103026945 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103026945 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
103026945
NCBI-ProteinID:
XP_022527095
Ensembl:
ENSAMXG00000005792
LinkDB
All DBs
Position
2:complement(20671518..20715327)
Genome browser
AA seq
1772 aa
AA seq
DB search
MCLLPTATLLTLGLGLLAQYVPDHNDKCAEGSCYPATGDLLIGRAHRLMASSTCGLNGPE
TYCIVSNMQAGKCFDCDSRETYDEYSYPNSHTIDNVVTTFTPNRLKTWWQSQNGMENVTI
QLDLEAEFHFTHLIMTFKTFRPAAMVIERSADYGQSWKVYRYFAFDCSESFPYISQGPVV
NVDDIICDSRYSDMEPSTAGEVIFRALDPVFKIPDPYSQRIQNLLRITNLRVRMLKLHTL
GDDLLDGGEEVRRKYYYALYDMVVRGNCFCYGHASECAPVRESERGEDGMVHGHCMCKHH
TTGLNCEECEEFYQDAPWKPAQGRSTNACKKCECNYHSDECHFDMAVYLSSGNVSGGVCD
NCQHNTQGQHCDDCKPFYYQHPNKHLRDPRICRPCDCDPLGSLNDGICDSVTDVLRGLIA
GQCRCKPNVEGESCNHCKPGHYGLSEHPLGCLPCSCNPMGTLPGGNPCDTETGRCYCRRL
VTGQYCDQCLPQFWGLSNDMDGCRPCDCDLGGALNNDCSPVTGQCVCREHMFGRRCDQME
SGYYFASLDHYIYEAEDAAFDPAVKVVPRPLPADRHPTWTGIGFANVPEGGTLRFTIDNV
PQSMEYSLLIRYEPQLPDVWEQVMVDVKRTGFPSPSAHCSPPYADQQSASLPPGYRYVVL
PRPVCLEKGQTYTVEMLMALYSSNDLHQNPHMLIDSIVLVPAVKDLELFSGSPDRQEAWT
MFQKYRCLEQGQSVQKTPMTDICREYIFSASALMHQGAMECQCDPRGSVSLLCDSIGGQC
SCRPNVVGKRCDTCSPGTFQLGPSGCRSCECDPMGSLNDFCDTTTGQCPCLPGVYGRQCA
HCLHNHWGFPHCQECFCNGHSHHCHPQTGQCLECRDHTTGQHCERCESGYHGNALLSSGE
HCRPCMCPDGPGSGRQFADTCYHNPNLRQLVCVCSPGYKGSRCEECMPGYYGNPHVVGGR
CHPCQCNGNIHMHDPGSCDSRTGVCLRCLFHTEGHGCQHCRRGYYGDASTQSCQKCMCLP
LGTASQSCRDGECECDRVSGQCPCLPGVVGLNCDRCAPNTWNINSKEGCQPCKCHPTHSY
SLSCDLLSGQCSCKPGFGGRACGECRELFWGDPEIKCHACDCDPRGIATPQCNKMTGTCV
CAEGVSGKRCDSCGRGYVGTFPDCQRCHKCFSEWDLTVNELTNQTQHLVGNVEELKVSGL
VSAYQDTVSSLEGGIKELTQIVEDNKAHQTLTHSENLLRQAKEMKLVLGRSLNRTEQTVG
QVSADHTRALDDLNTLSEEAQRLQDSTEDKQAQVLRIKHSNIRGAADSIREYYQQSREAE
GRANRATTDPLGPLEKSAGLRRATETTLNAIQGEYELKQKLQAERLDRLNKDLEQEDLSK
LSHRVCGGASGPDGCGDCGGLGCEGEDGSPQCGGEDCEGLITQSRESESKAKDLEQDILN
SLREVEKLHRMVSDARGRADEARLSAQDVAQKTNQSKAKFQQTNQELRELIQEIRDFLTR
GTDLGRIETLADEVLKLKMPTAAGELKDITAEIRQHVANLTSVDDILAESADQARIAEGL
LEEAHAVSETAVQLQEEAEEVQAALNESEHAQSAADESLKAAQIDLSYTQQKMASVESET
EGSEFKLSNSTQWRLNLESEVRAVRDQTRDTSISADFSQRKTDYISEDTQQTKRALELEL
EPNFKLLSGLMEQKAVGVFDARERAEQLRQEAKNLLDDTRNKLQKLLELERAFLVNQRTL
EERAEVLVGLEKQAEDVLQELSQKISGYSGCL
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctgttacccactgctacacttctcactctgggtttgggcctcttggcacagtat
gttcctgaccacaatgataagtgtgcggaggggagctgttacccagccaccggagacctg
ctgattggcagagctcatcggcttatggcctcatccacctgcggtctgaatggacccgag
acctactgcatcgtcagcaacatgcaggctgggaaatgttttgattgtgactctcgggag
acatatgatgaatacagttatcccaacagtcacaccatcgacaacgtggtcactaccttc
actccgaaccggcttaaaacctggtggcagtcccagaacggaatggagaatgtgaccatt
cagctggacttagaggctgaattccacttcacacatctcatcatgacctttaagacattt
cgtcctgcagcaatggtcatcgagcggtcagctgattacgggcagagctggaaggtgtac
cgttattttgcctttgactgctccgagtcttttccatacatctcacagggtccagtcgtt
aatgtggacgatattatttgcgattcacgctactcagatatggagccttcaacagcggga
gaggtcatcttcagagcacttgatcctgtgtttaagatccccgacccttacagccagaga
atccagaacctgttaagaataaccaacctccgggtgcggatgctgaagctgcacactctc
ggtgatgacctgctggatgggggtgaggaggtgaggcgaaagtattactacgcactctac
gacatggttgtccgcggcaactgcttttgctatggccacgcctccgagtgtgcaccagtt
cgagagagcgagcggggagaagacggaatggttcacggccactgtatgtgtaaacatcac
actactggactgaactgtgaggagtgtgaagagttttatcaggatgctccatggaaaccc
gcgcaaggccggagcaccaatgcatgcaagaagtgtgagtgtaactatcactcagacgag
tgtcactttgatatggcggtgtacctgtcgtcagggaacgtgagtggaggagtgtgtgat
aactgtcagcacaacacacagggtcagcactgtgatgactgcaaaccattctattaccaa
caccccaacaaacatctccgagacccccgcatctgcaggccgtgtgactgtgacccgctg
ggctctctgaatgacggtatatgtgacagtgtgacggatgttctgaggggtctgatagcg
ggacagtgtcgctgtaaacccaatgtggagggggagagctgcaaccactgcaaaccggga
cactatggactcagtgaacacccactgggctgcctgccgtgcagctgtaatcctatggga
acactccctggaggaaacccctgtgacacagaaacaggacgctgctactgcagacgcctc
gtcaccggccagtactgtgaccagtgtttgcctcagttctggggcctcagtaatgacatg
gacggctgtcgaccatgtgactgcgatctgggcggggctttgaataacgattgttctcca
gtaacagggcagtgtgtgtgtcgagagcacatgtttggccggcgctgtgaccagatggag
tcaggttattattttgcttccttggatcactacatctacgaggctgaggatgccgcattc
gatccggcagtgaaggtggtcccaaggcctctccctgcagatcgtcatcccacttggact
ggcattggctttgcaaacgtgcctgaaggaggaaccctcagatttaccatcgacaacgtg
ccacagtctatggagtacagcctgctgatccgctatgaaccacagttgccagatgtgtgg
gagcaggtaatggtggatgtaaagcgtactggatttccttcaccatcagcacactgttca
cctccttatgctgatcagcagagtgcctcactgcccccaggatacaggtatgtggttcta
cccagaccggtctgtttggaaaagggacagacgtacacagtggaaatgttgatggctctg
tattcatcaaatgatcttcatcaaaatccacacatgctcatcgactctattgtgctggtg
cctgcggtgaaggatttggagctgttctcaggatcgcctgacagacaggaagcatggacg
atgttccagaagtaccgctgtctagaacaaggccagagcgtccagaaaacgccaatgact
gacatctgcagagaatacatcttcagcgcatctgccctgatgcaccaaggagccatggag
tgtcagtgtgacccacgaggctctgtgagtttgctgtgtgactctattggtggtcagtgt
tcatgtcggccgaatgtggtgggcaagagatgtgacacctgctcccctggaaccttccag
cttggtccttctggctgcagatcgtgtgagtgtgatccaatgggttcccttaatgacttc
tgtgataccactaccggtcagtgcccgtgtctgccgggcgtgtacggacgtcagtgtgca
cactgcctgcacaaccactggggctttcctcactgccaggagtgcttctgcaacggccac
agccaccactgccacccccagaccggacagtgcctggagtgtagagaccacaccactgga
caacactgtgagaggtgtgagagcggatatcatgggaatgcgttgctcagcagcggggag
cactgtcggccctgtatgtgtccggatggcccggggagcggcaggcagtttgctgacacc
tgctaccacaaccccaacttacgccagctggtctgtgtttgcagcccaggatataaagga
tccaggtgtgaggaatgcatgcctggttattatggtaaccctcatgtggtgggtgggcgg
tgccacccctgtcagtgtaacggaaacattcacatgcacgacccggggtcctgcgactcc
cgcacgggcgtctgcctcaggtgcctcttccacactgagggccacgggtgccagcactgc
cgccgcggttactacggagatgccagcactcagagctgccagaagtgtatgtgcctgcca
ctgggcactgcttctcagagctgtagggatggtgagtgtgagtgtgaccgtgtgagtggg
cagtgcccgtgtttgcccggggtcgtgggactgaactgtgaccgctgtgcccccaacacc
tggaacattaacagtaaggaaggctgccagccatgcaagtgccaccccacacactcctac
agcctctcctgtgacctgctctccggtcagtgctcctgtaagcctggttttggtggcagg
gcatgtggggagtgtagagaactgttctggggtgatccagaaatcaaatgtcatgcgtgt
gactgtgacccgcggggcatcgctactccacagtgtaacaagatgacgggcacctgtgtg
tgtgcggagggcgtgtctggcaaacgctgtgactcctgtgggcgtggctatgttgggacg
ttcccagactgccagcgatgtcataagtgcttcagtgaatgggatttgacagtgaacgag
ctgaccaatcagacgcagcacttggtgggcaatgtggaggagctgaaagtgtctggtttg
gtctcggcctatcaggacacagtatccagtctggagggcggaattaaagagctaacacag
atagtggaggacaacaaagctcatcaaactctcacacactcagagaaccttctgcggcaa
gccaaagaaatgaagctggttttgggccgctctctgaaccgaacagagcagactgtgggt
caggtttctgcagatcacacccgagccctggatgacctgaacacactgagtgaagaggcc
cagagacttcaggacagcacagaggataaacaggcccaggtcctgcgcatcaagcactcc
aacatccgtggggcagcagacagcatcagagaatattaccagcagtcacgggaagccgag
ggtcgggctaatcgggccaccaccgaccccctcggcccgttggagaagtctgcaggcctg
cgtcgggccacggagaccaccctgaacgccatccagggagagtacgagctgaagcagaag
ctgcaggctgagagactggacagactgaacaaagacctggagcaggaagacctgtccaaa
ctcagccatcgggtgtgtggtggagcgtctggcccggacggctgtggagattgtggaggt
ctgggatgtgagggtgaagatggatctcctcagtgtggaggagaggactgtgaaggtctg
atcactcagagcagagaatcagagagtaaagctaaagacctggagcaggacatcctgaac
tcactgagggaagtggagaagctgcacaggatggtgtctgatgctcgtggccgcgcagac
gaggctagactcagcgctcaggatgtggcacaaaagaccaatcagagcaaagctaaattt
cagcagaccaatcaggagctacgggagctcatacaggaaatacgagactttcttacacgt
ggaacagatctagggcgtattgagactctggctgacgaggtgttgaagctgaagatgccg
acagcagccggggagctgaaggacataaccgcagagattcggcagcatgtggccaatcta
accagtgtggacgacattctagctgaaagtgctgaccaggcccgcattgctgaggggtta
ctggaggaggcacacgcagttagtgaaacagcagtccagctgcaggaggaagctgaagaa
gtgcaggcggcgctgaatgaatctgagcacgctcagtctgcagcagatgagagtctgaaa
gcagcacagattgacctcagctacacacagcagaaaatggcctctgtggaatcagagaca
gaggggtctgagtttaagttgagtaacagtactcagtggaggctgaatctggagagtgag
gtccgggcagtcagagatcaaactcgggacacatctatcagtgcagatttcagtcagaga
aaaacagactacatctctgaagacacgcagcaaaccaaacgggcgttagaactggagttg
gagcctaatttcaagttactcagcggactgatggagcaaaaagctgtgggcgtgttcgat
gcacgtgagagggcggagcaactgcggcaggaggcaaagaaccttctggatgatactaga
aacaaattacagaaactattagagctggagagagcgttcttggtaaaccagcggactctg
gaagagcgagcggaggtgctggtgggtctggagaagcaagctgaggacgtcctgcaggag
ctcagccagaaaatctccggctacagtggctgcctctaa
DBGET
integrated database retrieval system