KEGG   Astyanax mexicanus (Mexican tetra): 103026945
Entry
103026945         CDS       T05042                                 
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
  KO
K05636  laminin, beta 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04510  Focal adhesion
amex04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103026945 (lamb1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103026945 (lamb1b)
SSDB
Motif
Pfam: EGF_laminin Laminin_N LAMININ_IV_B EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 103026945
NCBI-ProteinID: XP_022527095
Ensembl: ENSAMXG00000005792
LinkDB
Position
2:complement(20671518..20715327)
AA seq 1772 aa
MCLLPTATLLTLGLGLLAQYVPDHNDKCAEGSCYPATGDLLIGRAHRLMASSTCGLNGPE
TYCIVSNMQAGKCFDCDSRETYDEYSYPNSHTIDNVVTTFTPNRLKTWWQSQNGMENVTI
QLDLEAEFHFTHLIMTFKTFRPAAMVIERSADYGQSWKVYRYFAFDCSESFPYISQGPVV
NVDDIICDSRYSDMEPSTAGEVIFRALDPVFKIPDPYSQRIQNLLRITNLRVRMLKLHTL
GDDLLDGGEEVRRKYYYALYDMVVRGNCFCYGHASECAPVRESERGEDGMVHGHCMCKHH
TTGLNCEECEEFYQDAPWKPAQGRSTNACKKCECNYHSDECHFDMAVYLSSGNVSGGVCD
NCQHNTQGQHCDDCKPFYYQHPNKHLRDPRICRPCDCDPLGSLNDGICDSVTDVLRGLIA
GQCRCKPNVEGESCNHCKPGHYGLSEHPLGCLPCSCNPMGTLPGGNPCDTETGRCYCRRL
VTGQYCDQCLPQFWGLSNDMDGCRPCDCDLGGALNNDCSPVTGQCVCREHMFGRRCDQME
SGYYFASLDHYIYEAEDAAFDPAVKVVPRPLPADRHPTWTGIGFANVPEGGTLRFTIDNV
PQSMEYSLLIRYEPQLPDVWEQVMVDVKRTGFPSPSAHCSPPYADQQSASLPPGYRYVVL
PRPVCLEKGQTYTVEMLMALYSSNDLHQNPHMLIDSIVLVPAVKDLELFSGSPDRQEAWT
MFQKYRCLEQGQSVQKTPMTDICREYIFSASALMHQGAMECQCDPRGSVSLLCDSIGGQC
SCRPNVVGKRCDTCSPGTFQLGPSGCRSCECDPMGSLNDFCDTTTGQCPCLPGVYGRQCA
HCLHNHWGFPHCQECFCNGHSHHCHPQTGQCLECRDHTTGQHCERCESGYHGNALLSSGE
HCRPCMCPDGPGSGRQFADTCYHNPNLRQLVCVCSPGYKGSRCEECMPGYYGNPHVVGGR
CHPCQCNGNIHMHDPGSCDSRTGVCLRCLFHTEGHGCQHCRRGYYGDASTQSCQKCMCLP
LGTASQSCRDGECECDRVSGQCPCLPGVVGLNCDRCAPNTWNINSKEGCQPCKCHPTHSY
SLSCDLLSGQCSCKPGFGGRACGECRELFWGDPEIKCHACDCDPRGIATPQCNKMTGTCV
CAEGVSGKRCDSCGRGYVGTFPDCQRCHKCFSEWDLTVNELTNQTQHLVGNVEELKVSGL
VSAYQDTVSSLEGGIKELTQIVEDNKAHQTLTHSENLLRQAKEMKLVLGRSLNRTEQTVG
QVSADHTRALDDLNTLSEEAQRLQDSTEDKQAQVLRIKHSNIRGAADSIREYYQQSREAE
GRANRATTDPLGPLEKSAGLRRATETTLNAIQGEYELKQKLQAERLDRLNKDLEQEDLSK
LSHRVCGGASGPDGCGDCGGLGCEGEDGSPQCGGEDCEGLITQSRESESKAKDLEQDILN
SLREVEKLHRMVSDARGRADEARLSAQDVAQKTNQSKAKFQQTNQELRELIQEIRDFLTR
GTDLGRIETLADEVLKLKMPTAAGELKDITAEIRQHVANLTSVDDILAESADQARIAEGL
LEEAHAVSETAVQLQEEAEEVQAALNESEHAQSAADESLKAAQIDLSYTQQKMASVESET
EGSEFKLSNSTQWRLNLESEVRAVRDQTRDTSISADFSQRKTDYISEDTQQTKRALELEL
EPNFKLLSGLMEQKAVGVFDARERAEQLRQEAKNLLDDTRNKLQKLLELERAFLVNQRTL
EERAEVLVGLEKQAEDVLQELSQKISGYSGCL
NT seq 5319 nt   +upstreamnt  +downstreamnt
atgtgtctgttacccactgctacacttctcactctgggtttgggcctcttggcacagtat
gttcctgaccacaatgataagtgtgcggaggggagctgttacccagccaccggagacctg
ctgattggcagagctcatcggcttatggcctcatccacctgcggtctgaatggacccgag
acctactgcatcgtcagcaacatgcaggctgggaaatgttttgattgtgactctcgggag
acatatgatgaatacagttatcccaacagtcacaccatcgacaacgtggtcactaccttc
actccgaaccggcttaaaacctggtggcagtcccagaacggaatggagaatgtgaccatt
cagctggacttagaggctgaattccacttcacacatctcatcatgacctttaagacattt
cgtcctgcagcaatggtcatcgagcggtcagctgattacgggcagagctggaaggtgtac
cgttattttgcctttgactgctccgagtcttttccatacatctcacagggtccagtcgtt
aatgtggacgatattatttgcgattcacgctactcagatatggagccttcaacagcggga
gaggtcatcttcagagcacttgatcctgtgtttaagatccccgacccttacagccagaga
atccagaacctgttaagaataaccaacctccgggtgcggatgctgaagctgcacactctc
ggtgatgacctgctggatgggggtgaggaggtgaggcgaaagtattactacgcactctac
gacatggttgtccgcggcaactgcttttgctatggccacgcctccgagtgtgcaccagtt
cgagagagcgagcggggagaagacggaatggttcacggccactgtatgtgtaaacatcac
actactggactgaactgtgaggagtgtgaagagttttatcaggatgctccatggaaaccc
gcgcaaggccggagcaccaatgcatgcaagaagtgtgagtgtaactatcactcagacgag
tgtcactttgatatggcggtgtacctgtcgtcagggaacgtgagtggaggagtgtgtgat
aactgtcagcacaacacacagggtcagcactgtgatgactgcaaaccattctattaccaa
caccccaacaaacatctccgagacccccgcatctgcaggccgtgtgactgtgacccgctg
ggctctctgaatgacggtatatgtgacagtgtgacggatgttctgaggggtctgatagcg
ggacagtgtcgctgtaaacccaatgtggagggggagagctgcaaccactgcaaaccggga
cactatggactcagtgaacacccactgggctgcctgccgtgcagctgtaatcctatggga
acactccctggaggaaacccctgtgacacagaaacaggacgctgctactgcagacgcctc
gtcaccggccagtactgtgaccagtgtttgcctcagttctggggcctcagtaatgacatg
gacggctgtcgaccatgtgactgcgatctgggcggggctttgaataacgattgttctcca
gtaacagggcagtgtgtgtgtcgagagcacatgtttggccggcgctgtgaccagatggag
tcaggttattattttgcttccttggatcactacatctacgaggctgaggatgccgcattc
gatccggcagtgaaggtggtcccaaggcctctccctgcagatcgtcatcccacttggact
ggcattggctttgcaaacgtgcctgaaggaggaaccctcagatttaccatcgacaacgtg
ccacagtctatggagtacagcctgctgatccgctatgaaccacagttgccagatgtgtgg
gagcaggtaatggtggatgtaaagcgtactggatttccttcaccatcagcacactgttca
cctccttatgctgatcagcagagtgcctcactgcccccaggatacaggtatgtggttcta
cccagaccggtctgtttggaaaagggacagacgtacacagtggaaatgttgatggctctg
tattcatcaaatgatcttcatcaaaatccacacatgctcatcgactctattgtgctggtg
cctgcggtgaaggatttggagctgttctcaggatcgcctgacagacaggaagcatggacg
atgttccagaagtaccgctgtctagaacaaggccagagcgtccagaaaacgccaatgact
gacatctgcagagaatacatcttcagcgcatctgccctgatgcaccaaggagccatggag
tgtcagtgtgacccacgaggctctgtgagtttgctgtgtgactctattggtggtcagtgt
tcatgtcggccgaatgtggtgggcaagagatgtgacacctgctcccctggaaccttccag
cttggtccttctggctgcagatcgtgtgagtgtgatccaatgggttcccttaatgacttc
tgtgataccactaccggtcagtgcccgtgtctgccgggcgtgtacggacgtcagtgtgca
cactgcctgcacaaccactggggctttcctcactgccaggagtgcttctgcaacggccac
agccaccactgccacccccagaccggacagtgcctggagtgtagagaccacaccactgga
caacactgtgagaggtgtgagagcggatatcatgggaatgcgttgctcagcagcggggag
cactgtcggccctgtatgtgtccggatggcccggggagcggcaggcagtttgctgacacc
tgctaccacaaccccaacttacgccagctggtctgtgtttgcagcccaggatataaagga
tccaggtgtgaggaatgcatgcctggttattatggtaaccctcatgtggtgggtgggcgg
tgccacccctgtcagtgtaacggaaacattcacatgcacgacccggggtcctgcgactcc
cgcacgggcgtctgcctcaggtgcctcttccacactgagggccacgggtgccagcactgc
cgccgcggttactacggagatgccagcactcagagctgccagaagtgtatgtgcctgcca
ctgggcactgcttctcagagctgtagggatggtgagtgtgagtgtgaccgtgtgagtggg
cagtgcccgtgtttgcccggggtcgtgggactgaactgtgaccgctgtgcccccaacacc
tggaacattaacagtaaggaaggctgccagccatgcaagtgccaccccacacactcctac
agcctctcctgtgacctgctctccggtcagtgctcctgtaagcctggttttggtggcagg
gcatgtggggagtgtagagaactgttctggggtgatccagaaatcaaatgtcatgcgtgt
gactgtgacccgcggggcatcgctactccacagtgtaacaagatgacgggcacctgtgtg
tgtgcggagggcgtgtctggcaaacgctgtgactcctgtgggcgtggctatgttgggacg
ttcccagactgccagcgatgtcataagtgcttcagtgaatgggatttgacagtgaacgag
ctgaccaatcagacgcagcacttggtgggcaatgtggaggagctgaaagtgtctggtttg
gtctcggcctatcaggacacagtatccagtctggagggcggaattaaagagctaacacag
atagtggaggacaacaaagctcatcaaactctcacacactcagagaaccttctgcggcaa
gccaaagaaatgaagctggttttgggccgctctctgaaccgaacagagcagactgtgggt
caggtttctgcagatcacacccgagccctggatgacctgaacacactgagtgaagaggcc
cagagacttcaggacagcacagaggataaacaggcccaggtcctgcgcatcaagcactcc
aacatccgtggggcagcagacagcatcagagaatattaccagcagtcacgggaagccgag
ggtcgggctaatcgggccaccaccgaccccctcggcccgttggagaagtctgcaggcctg
cgtcgggccacggagaccaccctgaacgccatccagggagagtacgagctgaagcagaag
ctgcaggctgagagactggacagactgaacaaagacctggagcaggaagacctgtccaaa
ctcagccatcgggtgtgtggtggagcgtctggcccggacggctgtggagattgtggaggt
ctgggatgtgagggtgaagatggatctcctcagtgtggaggagaggactgtgaaggtctg
atcactcagagcagagaatcagagagtaaagctaaagacctggagcaggacatcctgaac
tcactgagggaagtggagaagctgcacaggatggtgtctgatgctcgtggccgcgcagac
gaggctagactcagcgctcaggatgtggcacaaaagaccaatcagagcaaagctaaattt
cagcagaccaatcaggagctacgggagctcatacaggaaatacgagactttcttacacgt
ggaacagatctagggcgtattgagactctggctgacgaggtgttgaagctgaagatgccg
acagcagccggggagctgaaggacataaccgcagagattcggcagcatgtggccaatcta
accagtgtggacgacattctagctgaaagtgctgaccaggcccgcattgctgaggggtta
ctggaggaggcacacgcagttagtgaaacagcagtccagctgcaggaggaagctgaagaa
gtgcaggcggcgctgaatgaatctgagcacgctcagtctgcagcagatgagagtctgaaa
gcagcacagattgacctcagctacacacagcagaaaatggcctctgtggaatcagagaca
gaggggtctgagtttaagttgagtaacagtactcagtggaggctgaatctggagagtgag
gtccgggcagtcagagatcaaactcgggacacatctatcagtgcagatttcagtcagaga
aaaacagactacatctctgaagacacgcagcaaaccaaacgggcgttagaactggagttg
gagcctaatttcaagttactcagcggactgatggagcaaaaagctgtgggcgtgttcgat
gcacgtgagagggcggagcaactgcggcaggaggcaaagaaccttctggatgatactaga
aacaaattacagaaactattagagctggagagagcgttcttggtaaaccagcggactctg
gaagagcgagcggaggtgctggtgggtctggagaagcaagctgaggacgtcctgcaggag
ctcagccagaaaatctccggctacagtggctgcctctaa

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