Astyanax mexicanus (Mexican tetra): 103026991 Help Entry 103026991         CDS       T05042                                  Symbol strc1 Name (RefSeq) uncharacterized protein strc1   KO K24636   stereocilin Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:amex03037]     103026991 (strc1) Cilium and associated proteins [BR:amex03037]  Other cilia and associated proteins   Stereociliary proteins    103026991 (strc1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Stereocilin Motif Other DBs NCBI-GeneID:  103026991 NCBI-ProteinID:  XP_007245023 Ensembl:  ENSAMXG00000019279 LinkDB All DBs Position 23:13252427..13284590 Genome browser AA seq 2335 aa AA seqDB search MSSQLIYEKMHRRGLLFIFTTCFILGLASHESRGPSRSARSAPTTIIRRKDVPSSASEFE DDLDILIEALQSLKSTEPRVQDQINVKTGYHSDLHPSQNTKKTSTTGASSRAATNINLNT YLNVFSSLYSIYQPVLVESFLQNLPQAFVCVLADKTQCGWQADLTRTLSSRLSGPVLDLL SSLKSQTCPFTSSGTLRMADSTMTQLSAFQELITATLSSSFYLYHSDNFLSAWSSFMDLT FPSVASFISDLMMNFLQTLVDFLTIGLQLGVDIPSLDQNQQCQQGDLKQLLMWGMNHNIN WSFGDSILNMFLALDINPCSPTDTGCQITPPIQFGRASASPGNNPMTLTCDQQDVTQLND TLCSDILANLSQVPDVLYGVCKSLSTLSHSELIQVWKNTCEMVQLVFSPLLEPCPSLPPQ SSRRMARAALSLSQMFCNYDNWTTVEAIDPALVTMCSDNDPEAFLQGVCNNVPVMQHLIA NPSNAWVWEYCANASDRYMIVQYCFYETWSPQTLEPSIVVLCWNNDQMRMETFLCQSLDF YITVFSNPENSWLKPNCSEVPTTAPVDIHTLVAESCRYSEWRNLKTITIDTISLCIQNDE FRFVHEVCANSTILSALLLNDANVWVGAYCAIIIKNPPTSPPALSSITVSPIPPPYPSSV TSTTSSNTTGPLVPSSTMSIISVSPTNSLTDMTGTSTIALSSKTLNISSSSLPQTVMPTV SSLTLSPTAPLTFLSTESIISISPTKVLPVASSSTLFSPVSSIVSPTISSIFSSSKTPPL TVLSTVFSSTLSALAPSTAPPVVYSSSTSSTTISAKISATVSTTALPPISSSVFQTISST VSSLPLSPTAPLTFSSTGSIKNSPTVSTTALPPIHSTVFQTISSTVSSLPLSPTAPLTFS STGSIKTSATVSTAGLLSTSSAVFPTISPTVSSMMISPTTLPTTPPAIPSIADLCKYSSW GFSLLDSSIVGLCWQLDMAAFDLNVCCNTSLFEHLILNPENQWLKSVCHSNDTTDLLSQV CLYADWRQPSIVDMADLALCADLDTVNFIQKVCNNTVVLQNLLANLDNIWLLEQCTNLTK SNGSLMGFVPSTECRYSSWATTFPDAALLALCWDYDQANFISSICMNPAMLSYIIKEPSS LWVSTMCTTFTNYTKIPKNNTTSTTTNASNDAGPCLVKELLDRFNWSCSIDVTSACQAGI TQLQGLQLVFRCGVEVLLPRFQTMEPQVAPVIRQATSVWVVLLLVLEENAMTTLRVTENI QQSVLDSVSTYLERETNFDNKQVLLQCFGKLLTSLMQTGRDATSSTSFLIKEYFRIPLAS LRAVFTAVDPSTMRQILQYFSRNQATLQLSDEYLRTLVNVLILVQLRQDPTLLIDMSPLL NMATPEDIISLPPLQNNVNVVNFINSIINSLSLEQRQSFGLWFSQSVGQANMTSGGLSFI RDNGNLITYLPFLSFQQLSPAQLLNGLDILMRNDLGTLKQQFIAQSVIAAYKNLTMDQFK RLGTLTCQAKLNDLLGYVGTDVFPVIQENIRTCVSQGISITSTMISSLSLNSSDVQSPTS LSSEKISQLAPFLPLLGSNFLQQLSPAQLKPALSVLESVPFSPVQAAVIIDKLSLNLSVS GSGALSTLRFLASGVSVETLWGLPSDVLLSALSNFSQYSPQLTPPQLNAISSKVWGNPSV VGSLNNLDPLLFSTPLLNVIPRTTLILFNGSSPYTRTWNTQQAKTLFNSALISMRSLSTQ QFMTLGTVAQGVSCKVLVQLIQNNPTVSSMRDILRVLKKQPVSLHPSLKKCVIEELYKFA FFSDLLGDMSAEIALSIPMSTIKKFSVAMMDTLRNIIVQDPQHFLLMPNTKQAILVDKIV QRLDMRTGKYTEEEFRSLGIMAPFVVDEVFAQLDRTFLLNNMEFLRGFCYDSSKQDMIAS MLLESSTFGPIQTWTAATINQVDRFLFYVSRENLQLLSSDLLNQERIERLFSSQRQWESG AVGSLCVQESSVIFNKQQFLLQYFLGFLKPGRNVSPVLTCESLHLTQPSAWPISSITDMS STSFKRCLELIGQDPYFSPFQLSLLLRKTKDVYGAVSTFSPFLTAQLGNIATQLSVEELA LLNLSDIRTVSPLGAVISWTKKQSGVLFSAMLNSTKKNPSQLDSSSFIALGNIICGIDAA TIRKLNPVEFSKASLWLGQLNLTCSEDQLQAIITLLSHSLAFGPISSWGPEVFIEIGAFA AGIPDMAMSAMVKEQIEGITPLAMSLIPANKFAVVFNQVQISGFSYEQAAAITPAQRSTL SAVQETALSMVLNPLDDKPVDFRGRSFGVATAVSPLCHLCSLLVLLLTFLISGPL NT seq 7008 nt NT seq  +upstreamnt  +downstreamnt atgagctcacagctcatttatgagaaaatgcaccgcagaggacttttattcatttttaca acctgcttcatcctcgggcttgctagccatgagtccagaggccccagtcgctcagctcgt tcagcacccaccaccatcatcagaaggaaagatgtcccttccagtgccagtgaatttgag gatgacttggacattctaatagaggcattacagtctctgaaaagcactgaacccagagtt caggaccagatcaatgttaagactgggtaccattcagatctccatccatcacaaaacact aaaaagacgagtacgacaggggcatctagccgcgctgcaacaaatataaacctcaacact tatttaaatgtcttcagcagcttgtactccatctatcagcccgttctggtggaaagtttt ctccagaaccttcctcaagcttttgtttgtgtgctggcagacaaaacacagtgcggatgg caagcagatttaacaaggacattatcatccaggttaagcggaccagtgctagacctcctg tcatcccttaaatctcagacatgtccattcacttccagtgggactctcagaatggcagac tccactatgactcagttaagtgcctttcaggagctgattacagctactctgtcctcgagc ttctatttgtaccactctgataactttctgtctgcatggagtagttttatggatctgact tttccctcagtggcctctttcatttctgatttaatgatgaactttttacaaacgcttgtg gatttcctaaccattggactccagctgggtgttgacatcccttccttggaccagaatcag cagtgtcagcaaggtgacctaaagcaacttttgatgtggggcatgaaccacaatataaat tggtcctttggagactcaatcttgaacatgtttctggcacttgatatcaatccatgcagc cctacagacacaggatgccagattacaccacctatccagtttggtcgagccagcgcatcc ccaggaaacaatcccatgacactgacgtgcgaccagcaggatgtgacccagctcaatgac accctctgttcagacattttagccaacctgtctcaggttcctgatgttctatatggtgtg tgcaaatctttaagcaccctttcccactctgagctaatccaggtgtggaaaaacacttgt gagatggtccagcttgtcttttcaccactgctggaaccctgcccttctttaccgcctcaa tcaagcaggcgaatggcaagggctgcgcttagcctcagtcaaatgttctgcaactatgac aactggaccaccgtggaagccatcgatccggctctagtcacaatgtgtagcgacaatgac cctgaagcgttcctgcagggtgtgtgtaataatgttcctgtcatgcaacacctcatcgca aaccctagcaatgcctgggtttgggaatactgtgcgaatgcttccgatcgatatatgatc gtgcagtactgcttttatgaaacgtggagtcctcaaacactagagccctccattgtggtt ttgtgctggaacaatgatcagatgagaatggagacttttctttgtcagagtttggatttt tacatcaccgtattctccaacccagaaaacagttggttaaaacctaactgcagtgaggtg cctactaccgcaccagtggacattcacacccttgtagcagaatcatgtaggtactcagaa tggcgcaacctaaagacaattaccatagatacaatatccctgtgtatacaaaatgacgag tttcgattcgttcatgaggtttgtgccaatagcacaatcctttctgcacttttgcttaat gatgcaaatgtttgggtgggagcgtactgtgctatcattatcaaaaatcctccaacaagc ccaccagcactgtccagcatcactgtttctccaattcccccaccatacccctcttctgtt actagtactacatcttctaacacaactggcccattggtcccatcatcaacaatgtccatc atttctgtttctcctacaaattccctaaccgacatgacagggacctctactatcgctctt tctagcaagactttaaacatttcttcctcaagtctcccacaaacagtcatgccaacagtt tccagccttactctttctcccactgcccctttgactttcttgtcaacggagtccatcatt agtatctctccaacaaaagtcttgccagtggcctcaagcagcactctcttttccccagta tcctctattgtctctccaacaatatcctcaatcttcagctcttctaaaacacctcctttg actgttttgtcaacagtctttagcagtaccctttcagctttagctccatcaacagctcca ccagtagtatattctagttctacatccagtacgactatctcggccaaaatctctgcaact gtctccacaacagcattgccccctatctctagctctgttttccaaaccatttcttcaaca gtttctagtcttcctctttctcccacagcccctttgactttctcttcaacaggttccatc aaaaactctccaactgtctccacaacagcgttgccccctatccatagcactgttttccaa accatttcttcaacagtttctagtcttcctctttctcccacagcccctttgactttctct tcaacaggttccattaaaacctctgcaactgtctccacagcagggttgctctctacctct agtgctgttttcccaaccatttctccaaccgtttctagcatgatgatttcccccacaacc cttccaaccacccctcctgcaattcctagcatcgctgatttgtgtaaatattcatcatgg ggattttcactcttggattcatcaatagtaggtctctgttggcagcttgacatggcagca tttgatctaaatgtgtgttgtaacacatcactatttgagcatctaattctcaatcccgag aaccagtggctaaaatctgtgtgtcacagtaacgacacaactgacttgttgtcccaagtt tgtctgtatgccgactggaggcagccaagcattgtagacatggctgacctcgctctctgt gctgatcttgacacagtgaacttcatacaaaaagtatgcaacaatacagttgtgctgcag aatcttctagccaatttggataacatttggttgctggagcagtgcactaaccttacaaag agtaacggcagcttaatgggattcgtgccctccaccgaatgccggtattccagctgggct accacattcccagatgcggcccttcttgccctctgttgggactatgaccaagcaaacttt atctcctcaatctgtatgaaccctgccatgctctcttacatcatcaaggagccttccagc ctctgggtgagcacaatgtgtaccaccttcacaaactacactaagatccccaaaaacaac accaccagtacaaccacaaacgcctccaatgatgccggaccatgcttggttaaagagctt ctggacaggttcaactggtcatgcagcatagacgtgacctcagcttgtcaggccgggatc actcagttacaggggttgcagttagtctttcggtgtggggtggaagtcctcctgccccgt tttcagaccatggaaccacaggttgctccagtaatcaggcaggctaccagtgtatgggtg gtcctactgctagttcttgaggagaacgcaatgacaactctaagggtgacggaaaacatc cagcaaagtgttctggattcagtgtctacctacctggagagggaaacaaactttgacaac aagcaagtgttgctacaatgctttgggaaattgttgaccagcctgatgcaaacaggaaga gatgcgaccagtagtacgtctttccttatcaaggagtatttccgtattcctcttgcgagt ctgagggcggtgttcactgcagtagaccccagcaccatgaggcagattttacaatatttc agccggaaccaggctaccctgcagctctctgatgagtatttgcgtacattggtgaatgta ctgatcctagtccagctgaggcaagatccaaccctattgattgacatgagccctctcctg aacatggcgacaccagaggacatcatctcacttcctccattacagaacaatgtcaatgta gtgaacttcattaacagcatcatcaacagcctgtccctggagcagcggcagagtttcggc ttgtggttcagccagtctgtcggtcaggccaacatgacgagcggcggcttgtccttcatc cgagacaacggcaacctgatcacgtatctgccgttcctcagcttccagcagctctcacct gctcagctcttgaatggtctggatatcttaatgaggaatgacttggggacattgaagcag cagtttatagctcaaagtgtcattgcagcatataagaacctcacaatggaccagttcaaa aggttgggcactctgacatgtcaggctaaactgaatgacctgctagggtatgtgggcaca gacgtcttcccagtgatccaggaaaacatcaggacgtgtgtatcacagggcatcagcatc actagcaccatgatatctagtctgtctctgaactcatctgatgtgcagtcccccacctct ctcagctctgagaagatctcccagctcgccccgttcctgccccttctgggctctaacttc ctgcagcagctcagtcctgcccagcttaagcctgctctcagtgtactggagtctgtgccc ttctcacctgtgcaggctgctgtgatcatagacaagctatccctaaacttgtctgtgtca ggttctggagctctgtcgacactaaggtttctggcgagtggagtgagtgtggagactctg tggggtttaccctctgatgtgctgctatctgccctgtccaacttcagccaatactcaccc cagctgacccctccacagctcaacgctatttcctccaaagtctggggtaatccatcagtg gtcgggtctctgaataatttggatcctctgctgttcagcacgccgctgctgaatgtaatt ccccgaacaaccctaattttgttcaatggctcctctccatacacacgtacttggaacaca caacaggccaaaaccttattcaacagcgctttaatttccatgcgaagtctgtcaacacag cagttcatgactctggggacagttgctcaaggcgtgagctgtaaagttttggtgcagctg atccagaataatccaacagtttcatccatgagagacattctgagagttctgaaaaagcag ccagtgtcactccacccatcactgaaaaagtgtgtgattgaagaactgtacaagtttgcc ttcttctccgacctgcttggggacatgagtgctgagattgctctctcgatcccgatgagt accataaagaagttctctgtggcgatgatggacaccctgaggaacattatcgtgcaggat ccacagcactttctgctcatgcccaacactaagcaggccatccttgtggacaagatagtt cagcggctggatatgcgcactggcaagtacacagaggaggagttccggtcgctgggcatt atggcgccgtttgtggtggacgaggtttttgcacagctggacaggaccttccttctgaac aatatggagtttctgagaggattctgctatgatagtagcaaacaagatatgatagcctca atgctactggaatctagcacatttggcccaatccaaacctggacagctgccaccatcaat caagtggataggttcctgttctacgtctcaagagagaacctccaactactttcttcggat ttgctgaatcaggagcggattgagcgtctgttctcgagtcagcggcagtgggagagtgga gctgtgggctctctctgtgtacaggagagctctgtgatcttcaacaagcagcagtttttg ctccagtacttcttaggattcctgaaaccgggacgcaatgtgagtccagtgctgacctgt gagagtctgcacctgacccagccctctgcctggcctattagcagcataacagacatgtcc tccacgtcattcaagagatgtctggagctcatcggccaggatccttacttcagccccttc cagctatccctgcttctccgcaaaactaaagatgtgtatggtgcagtctccactttcagt ccattcctcacggctcagctggggaacatcgctacacagctttcagtggaagaactggct ttacttaacctgtctgatatacgaactgtatcaccactgggagctgttattagctggacg aaaaagcagtctggggtgttattctctgccatgctgaactccactaaaaaaaaccctagc cagctggactccagctccttcatcgccctgggaaacattatttgcggaattgatgctgcc acaatccgtaaactcaatcctgtagagttcagtaaagcgtcactgtggctcggccaactg aacttaacctgctctgaagaccagctccaggcaatcatcacactgttgagccacagtttg gcttttggaccaatcagctcatggggaccggaggtcttcattgagattggagcgtttgct gctggcattccagacatggctatgtccgccatggtcaaggagcagattgaaggaatcacc ccacttgctatgtctctgattccagccaacaagtttgcagtcgtttttaaccaggtgcag attagtgggttttcctacgagcaggctgcagcaatcactccagcacagcgctccacactg agtgctgtccaggagactgcactgtccatggtgcttaaccccctggatgacaaacctgtg gatttcagaggaaggtcatttggggtcgcaacagccgtgtctcccctctgccatctctgc agcttgctggtgttgctgttgacatttctgatcagtggccctctgtga

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