Astyanax mexicanus (Mexican tetra): 103027032 Help Entry 103027032         CDS       T05042                                  Symbol col4a4 Name (RefSeq) collagen alpha-4(IV) chain   KO K06237   collagen type IV alpha Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex04382   Cornified envelope formation amex04510   Focal adhesion amex04512   ECM-receptor interaction amex04518   Integrin signaling amex04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:amex00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103027032 (col4a4)    04518 Integrin signaling     103027032 (col4a4)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     103027032 (col4a4)   09142 Cell motility    04820 Cytoskeleton in muscle cells     103027032 (col4a4)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     103027032 (col4a4)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:amex04147]     103027032 (col4a4)    00536 Glycosaminoglycan binding proteins [BR:amex00536]     103027032 (col4a4) Exosome [BR:amex04147]  Exosomal proteins   Exosomal proteins of other cancer cells    103027032 (col4a4) Glycosaminoglycan binding proteins [BR:amex00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103027032 (col4a4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  103027032 NCBI-ProteinID:  XP_022532663 LinkDB All DBs Position 18:complement(37005867..37142509) Genome browser AA seq 1662 aa AA seqDB search MTRPRWIAWVSLPLWWLLLTHVSRQTVRGGGKSVECGGRDCSTCQCFPAKGARGLPGSLG RPGLQGPIGFPGRTGPPGDKGLQGYQGFPGESGQQGDQGDPGRPGFPGLQGVPGHPGPGG LPGLPGVDGCKGSPGEPGPPGLPGESCRPAPKGCQGPKGLKGDLTYKYTSYPGPPGRAGL PGNPGPKGNDGERGHKGSPGLNGEPGITGRDGDPGARGPPGDTGKSIFGLKGDEGIIGEQ GPPGPYEVIEPPEDYYQKGDKGRKGVKGQCGPTGFKGEIGPPGEKGEKGIPGFPGIRGAP GYPGLPGIQGLEGGRGSDGLPGLIGNKGQKGFPGDAGPQGETTFHYLNITGSVGDPGPPG FFGDKGDMGMMGLPGPKGFPGLSIKGDMGFAESIGIPGEKGIKGEPGRRANSILTYGEPG KMGPPGQKGSPGPAGIPGSKCIPGPLGEFGEKGEKGPPGEIGNKGPKGFDGICECPPPPD MPGPKGFAGDPGNPGDPGRPGRPGLQGDFGPTGDKGLPGQYGDKGFRGLKGRKGDKGDLY IMSDKGVRGDPGANGVPGDPGFEGRVGDTGKPGAPGDTGPQGDSLSGCPGDRGDPGNPGC KGQKGAPGPPGPGVPGSIGQRGLNGDPGPPGRRGIDGPKGVKGDMRPCSPTKPGDPGPKG EMGDQGLPGEKGLSGLPGFRGPPGLKGPAGTKGDSGSCGYRGPTGNVGDPGDPGPDGLSY GGQPGIPGLDGPLGLKGSPGNSFPGAPGPMGPIGFNGLSGPKGVPGPSGSPGSEGPPGEP GAKGRKGEPGPIGQLGGPGCTGPNPKQCDRGPDGPVGDRGPPGFTGTPGYRGEKGVMGQP GLPGAGPKGMAGNAGPPGLQGCTGLQGPPGPPGESGIPAGSGRKGLPGLDGKDGQPGEPG QNGSPGSPGSSGEKGPDGRPGFPGEQGIRGQKGMDGFPGPRGQTEVIQIKGNPGPPGPPG MNGFTGPRGEKGERGLLGLNGNQGGPGPPGYERGPQGLPGASGIPGESGLRGSKGPLGIM GFPGISGFPGDRGSKGSPGAPGLNGREGLKGDKGCSVSIPGLPGVNGPKGDIGLQAFVGD RGEVGQYGPPGTCGKPGAVGPDGPRGYPGPQGVIGPPGPCGNYGPEGPPGPPGRLGLKGN PGRSGLRGPPGPLGLNGLDGLRGLKGATGPQGMVTSGDRGPQGLSGDQGCTGDTGPSGLS QPGNKGAKGMPGNRGDPGPSGPPGFAGEDCRDPKLGQMGESGYAGLDGPQGAPGPVGAPG LPIPISGDPGEPGAKGFPGFRGQKGTPGLPGLPGIQGYNGNKGEKGDMGVLGEPGPPGLP GSCCHSGPNGLKGKQGDPGPPGEPGIVIYEKAAPSRGPLGPPGTCGPPGPQGPAGTDGRT GPKGLKGEPGEKGLSGLMGSEGSQGYPGDEGLKGERGPPGQAGPPGPQGDPGPSQSCNSG FLVAFHSQSQVVPSCPLNMTEVWQGYSLLYLEGQEKAHTQDLGQAGSCMRIFSTMPFAYS NPGICNYASRNDKSYWLSTSVALPMMPVSGLSIQPYISRCVVCETPSPAFAIHSQSKELP RCPLSWKPLWIGYSFLMHTGSGDEGGGQSLTSPGSCLPNFRTHPFVECQGEHGTCNFFPS IYSYWLTNVEQQAIKPVPEKTVLKEELEQRDNTSRCIVCMRY NT seq 4989 nt NT seq  +upstreamnt  +downstreamnt atgacacgcccccgctggattgcctgggtcagcctccctctctggtggcttctattgaca catgtgtccagacagacagtacgagggggtggtaagtcagtagagtgtggtgggcgagac tgcagcacgtgccagtgtttcccagccaaaggagccaggggattgcctggttctctgggg agaccgggtcttcaggggcctataggatttccaggccggacggggcctcctggagacaaa ggattacagggatatcaagggtttcctggggaatctggacaacaaggagatcaaggtgat ccaggaagacctggcttccctggactacagggtgtcccgggtcatcctgggcctgggggt cttcctggccttccaggagtagacgggtgtaaaggatcgccgggtgaacctggaccccct ggccttcctggggaaagttgcagacctgcaccaaaaggttgtcaaggaccaaaaggactg aaaggagatcttacctacaaatatacatcctaccctggtcctcctggtagggctggactg cctggtaatcctggaccaaagggaaatgacggcgagcgaggtcataaaggttcacctgga ttgaatggagagcctggaataacaggtagagatggtgatcctggtgctagagggcctcca ggagacacagggaaatcaatatttggtctgaaaggtgatgaggggatcataggagagcag ggccctccaggtccttatgaagtgattgagccaccagaagattactaccagaaaggagac aaggggagaaaaggagttaaaggacagtgtggacctactggttttaaaggagaaattgga cctcctggggagaagggagaaaaaggaatcccgggtttcccaggaatcagaggagcccct ggataccctggactacctggcatacaaggacttgagggtggacgtggtagcgatggtctc cctggtcttattggcaacaaaggacaaaagggattcccaggagatgctggaccccaaggc gagacaacatttcattatttaaatataacaggatctgtaggagatccaggacctccaggg ttttttggtgataaaggagacatgggaatgatgggcctgcctggccctaaagggtttcca ggattaagcataaaaggtgacatgggttttgcggagagtatagggatcccaggagaaaaa ggtattaaaggagagcctggacgtagagctaacagcatcctaacctatggggaacctgga aaaatgggccctccaggacagaaaggaagtccaggtcctgctggaatccctgggtccaaa tgcatccctggccctctaggagagtttggagagaaaggagagaagggccctccaggagag attggcaacaaaggccctaaaggttttgatggtatctgtgaatgtcctccaccccctgat atgcctggtcctaaaggttttgcaggtgaccctggtaatcctggtgatccaggcaggcct gggcgtcctggtctgcagggtgactttggtcccactggagacaagggcctgccaggacaa tatggtgataaaggttttcgaggtctcaaagggaggaaaggggacaaaggagacttatat ataatgagcgacaaaggtgtcaggggagatcctggagcaaatggagtacctggtgatcct ggatttgaaggcagggtgggggatactggtaaacctggtgctcctggagatacaggtcca cagggtgatagtctttctggctgccctggtgatcgaggggatccgggtaatcctggttgt aagggccagaaaggtgcaccaggaccaccaggcccaggagttcctggatcaattggtcaa cgagggctaaatggggaccccggacccccaggacgaagaggaattgatggaccaaaagga gttaaaggtgatatgaggccttgttcacctaccaaacccggggaccctggacctaagggt gaaatgggtgaccaaggtttgcctggagagaaaggtctttcaggcctacctgggtttaga ggcccaccagggttaaagggcccggctggtacaaagggtgactcaggatcttgtggctac agagggccaactggaaatgtgggggacccaggagaccctggccctgatggcttaagttat ggtggccagccgggcattcctggtcttgatggacccttaggattaaaaggatcccctgga aactcatttcctggagctccagggccaatgggtcctattggatttaacggactctcagga cctaaaggagtccctggaccctcaggttcacctggtagtgaaggtcctccaggtgaaccg ggagctaaaggaagaaaaggagagcctggaccaataggacagcttgggggaccggggtgt acagggccaaatccaaaacagtgtgaccgtggaccagatggtccagtgggagacagggga ccccctggcttcacaggaactccagggtaccgtggtgagaaaggagtgatgggtcagcct ggccttccaggagcagggcccaaaggtatggcaggaaatgctggtcctcctggtcttcag ggatgtactggtcttcagggccccccaggacctcctggtgagagtgggattcctgctggt agtggacgaaagggtttaccgggacttgatggtaaggatggtcaacctggtgaaccaggt cagaacggtagtccaggatcacctggctcaagcggtgagaaagggccggatgggaggccc ggttttccaggtgaacaaggcatcagaggacaaaaaggcatggatggctttcctgggcca cgaggacaaactgaggtgatacagatcaaagggaacccggggccacctggacccccagga atgaacggcttcacaggacccagaggtgaaaaaggtgaaaggggattactgggtttaaat gggaaccaagggggccctggacctcctggatatgagcgtggccctcaggggctaccaggt gcatctggaatacctggtgagtctggactgcgtgggtcaaaaggaccactaggcatcatg ggattccctggaataagtggatttccaggagacagggggagcaaaggttcacctggagca ccgggcttgaatggacgtgaaggactgaaaggtgataaaggatgctctgtaagtatacct ggacttcccggtgtgaatggcccaaaaggagatataggcctccaagcttttgtaggagat agaggagaagtggggcaatacggacctcctgggacttgcggaaagccgggcgcagttgga cctgacggaccacggggctatcctggacctcagggtgtaattggccccccaggtccctgt ggaaattatggtccagagggtccaccaggacctcctggacgtcttggactgaaaggaaat ccagggagaagtggactcagaggtcctcctggcccgctgggcctgaatggattggatgga ctaaggggcttaaaaggcgcaactgggccacaaggaatggttacatctggtgatagaggt cctcagggtctgagcggagatcagggctgcactggagatactggcccatctggtctatca cagccagggaacaagggtgcaaagggaatgcctgggaacagaggggatcctggtcctagt ggtcctcctggttttgctggtgaagactgtagggaccctaaactaggacagatgggtgaa tctggctatgctggtttagatggcccacaaggagctccagggcccgtaggagctccaggg ctacctatacctataagtggagatcctggtgaacctggagctaaagggtttcctggattc agaggacagaaaggtactcctggactccctggacttccaggcattcaaggctataatgga aataaaggtgaaaaaggagacatgggagtcctgggggaacccggcccccctgggttacca ggatcatgttgccatagtgggcctaatggactgaagggaaagcagggagatccaggtcct cctggggaaccagggattgtaatttatgagaaagcagccccatcgcgagggccacttgga cctcctggtacatgtggaccacctggccctcaaggacccgcaggaactgatggtagaaca ggcccaaaagggcttaaaggagagcctggagaaaaagggttgtcaggtctaatgggatca gaaggttcacagggatatcctggagatgaagggctgaaaggcgagagaggacctccagga caagctggccccccaggccctcaaggagaccctggtccctcacagagctgtaactctggc ttcctggttgcctttcacagccaatcccaagttgttccttcatgccctctgaacatgacc gaggtctggcagggatacagcttactgtacctcgagggacaggagaaagcacacacacag gacctgggtcaggcaggctcctgtatgcgtatcttcagcactatgccgtttgcttactct aatccgggaatttgcaactacgccagtcgcaacgacaaatcctattggctctccacctct gtggcattacccatgatgcctgtgtctgggctgagcatccaaccatacatcagcaggtgt gtggtgtgtgaaactccgtcaccagcatttgccatccacagccagagcaaagaacttcct cgctgtcctctgagctggaagcccctctggattggatactccttcctcatgcacaccggg tccggcgatgagggtggtggccagtctctcacatcaccaggaagctgtctgccaaatttt cgcactcatcccttcgtggagtgccagggagagcacggcacctgcaactttttcccaagc atttacagctactggctgacgaatgtggaacagcaggccattaaacctgttccagagaag actgtccttaaagaagaactcgaacagcgtgacaacaccagccgctgcatcgtctgcatg aggtattaa

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