Astyanax mexicanus (Mexican tetra): 103027105
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Entry
103027105 CDS
T05042
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103027105 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103027105 (trip12)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
103027105 (trip12)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
HECT type E3
103027105 (trip12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Motif
Other DBs
NCBI-GeneID:
103027105
NCBI-ProteinID:
XP_049339186
LinkDB
All DBs
Position
9
Genome browser
AA seq
2089 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPHDHTLAGRLQSEHAKQKAISPPESRRSYSKASKAP
PTTAAGSARGHTSRRNSLSHSVSDPDSEAAGSSGQQEQREGGSSSVSNVSSSRSLKRNSA
PEHNSTGSYSPSPAKRPKAHSEGSVAGPSDPPGASEPKSKSKKRRLASELPPKAASRKSS
PGPGPSGASSASSASHKRKKADASSSSSSSSSSSSSSSSLGGPPPPRSDTGRPAKPSKLA
SKPAASAKAGCSAVTDSSSSSASSSSASSSSSSSAATGVNSCAPPQGARLKQGKDQSKSR
RSRSASSPSPRRSSRDKEQPKAAGSSKFEWTSRFNPKVNLPKPRLSLPGSSKPESSSKPG
PSGLQAKLASLRKSSKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAADTR
RQDKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMGRLQAL
LEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAAIEMCQL
LVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIP
VFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAI
AANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVA
SRDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPSLAVQLMKQNIAETLRFLLCG
ASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAHTAEGAVWQ
WRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQ
RKPNPLANPNTGGHLEVRGEDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHK
CLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVF
SVYFRREGVMHQVKNLAESETFFTSPPKACTSGTTSLCTTTITTATTTAASNVTPDLGSP
SFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTASPK
SSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARATPKDSVSNNRDKIKAWIKEQAS
KFVERYFNSENVDGSNPALNVLQRLCTATEQLHLQVDRGVECLVEICSIVSESDVSSFEI
QHSGLVKQLLLYLTSNSERDTVSRDQRIKRFLHIFYGCPMPGQETLFRLEPTENGPLLAL
VHKMNSCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWK
GGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHR
LQFYIGEQLLPYNMTVYQAVRQFSLQPEEERESTDDEANPLGRAGIWTKTHTIWYKPVRE
DEDGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHDGVCPSVSNPLEAYLISDPPEGIT
FDDPSLEVILLLRVLHSISRYWFYLYENAVCKEIIPTSEFINSKLTAKANRQLQDPLVIM
TGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVA
PRLDRKKRTINREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQ
RADLGLWRGEEVTLANPKGSQEGTKYMFSSRGLFAVPFGRSTKPAHIAKIKMKFRFLGKL
MAKAIMDFRLLDLPLGLPFYKWMLRHESSISSFDLVNIDPGVAKSIQHLEDIIRQKRRLE
QDQSHTRETLQLALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLEEYLR
LVVYWTLNEGVSRQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECC
RPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTF
ESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccacacgaccacacacttgctggaaggttgcagtcagagcacgccaaa
caaaaagcaatttccccacctgaaagtagaagatcatattctaaagcttccaaagccccg
cccaccacagccgctggctccgcccgtggccacacctcccgcagaaacagtctctctcac
tcagtatcagatccagattcagaagcagcaggaagttcaggccagcaggagcagcgtgaa
ggcggcagctctagcgttagcaacgttagttccagtcgctctctcaaaagaaactctgcc
cctgagcacaacagcaccggctcctattccccgagtccagccaagcggcccaaagcccat
tccgaaggctcagtcgccgggccctcggacccacccggagcctctgagcccaaatccaag
tccaagaagcgccggttagcgtcggagctgccccccaaggccgccagtcgaaagagcagc
ccgggtcccgggcctagcggggcctccagcgcctcctctgcctctcacaaacgaaagaaa
gccgacgcttcctcctcgtcctcttcctcttcgtcctcctcgtcctcttcctcgtctctc
gggggcccaccgcccccccgcagcgacaccggccggccagccaaaccctccaagctggcg
tccaaaccggccgcatcagccaaagccgggtgcagcgccgtcaccgactcctcctcctcc
tctgcctcttcttcctccgcatcctcctcttcttcctcctcggcggccacaggcgtgaac
agctgcgcccctccgcagggtgcccggctgaagcagggtaaggaccagagtaaatcacgc
agatctcgctcggcctcctccccctcgccccgcaggagcagccgcgataaggagcagccc
aaagccgcgggatcctccaagtttgagtggacgtctcgtttcaaccccaaagtcaacctg
ccaaagcccagactgtccctgcccgggtcatccaagccggagagctcgtccaaacccgga
ccgtccggactgcaggccaaacttgcaagtttgaggaagtccagtaagaagcgtagtgag
tctcccccagcagagctccccagctttaggaggagcacacgccagaagaccacgggctcc
tgcgccagcaccagtcggcgaggctctggcctgggaaagcgcggggcagccgatactcgc
cgacaggacaaaatggccgactccgacaacaaccaggatggagcaaactcgtcggcagca
agaacagaggagacgccccagggagcttcagcctctagctcagtggccggagctgtgggt
atgaccacatctggagagagcgagtcggatgactctgaaatgggccgattacaagcccta
ctggaggcccgtggtctcccccctcacctgtttgggccccttggacctcgaatgtcccaa
ctgtttcaccgcaccattggcagcggtgccagttcaaaagctcagcagctgctgcaggga
ttgcaggctacaggtgatgagtctcagcagcttcaagcggctatagagatgtgccagctg
ctggtgatgggtaacgaggagacactgggcggcttccccgtgaagagtgttgtccctgcc
ctgatcacactgttacagatggagcataattttgatattatgaaccatgcctctcgtgct
ctgacctatatgatggaggccctgcctcgctcctccgctgttgtggtggatgcaatccca
gtcttcctggaaaagcttcaggtgatccagtttattgatgtggcggagcaggctctgacc
gctctggagatgctgtcacggcggcacagcaaggccatcctgcaggctggcgggttagcg
gactgtttgctgtatctggagtttttcagcattaacgctcagaggaatgcgttagctata
gccgctaactgctgtcagagtataactccagatgagttccacttcgtggccgactctctg
cctctgctcacccagagacttacacaccaggataagaaatctgtggaaagcacatgtctg
tgttttgcccggctggtggacaactttcagcatgaagagaatctgctgcagcaggtcgca
tcccgggacctgctgaccaacatccagcagctgttggtggtcactccacccatactgagc
tccgggatgttcattatggtggtccgcatgttctccctcatgtgctccaactgcccatcc
cttgcagtccagctgatgaagcagaatattgcagaaactctgcgctttctgctttgtgga
gcatctaacgggagctgtcaggagcagattgatctggtacccagaagcccccaggaactt
tacgagctcacatcgcttatatgtgagctgatgccgtgcctccctagagagggcatcttt
gcggttgatgccatgctcaaaaagggcagtgcccacactgcagaaggtgctgtttggcag
tggagggatgaccgtggcctttggcatccctacaaccgcatcgacagccgcatcattgag
acggcccaccagaacggtgaagatgagatcagtctgtctacgctgggccgtgtttatacc
attgactttaactctatgcagcagattaacgaggacaccggtacagccagaggcatccag
agaaaaccaaacccactggccaatcccaacactggaggtcatctggaggtgcgtggtgag
gacgctcgcgctcagctgatgaaggaggaccctgagctggcaaagtgttttataaagacg
ctgttcggtgtgctgtatgaagtttacagctcctctgccggacctgccgtcagacacaag
tgccttagagctatcctccgcatcatctactttgcagatgctgagctgctgaaggacgtc
ctgcgcaaccacgctgtgtccagtcacatagcctccatgctctccagtcaggacctgaag
attgtagtaggctcactgcagatggcagagatcctcatgcagaaacttcctgacgtgttc
agcgtctatttcagaagagaaggtgtgatgcaccaggtgaagaacctggctgagtcagag
acgtttttcaccagcccccccaaggcttgcacaagtgggaccaccagcctttgcaccaca
accatcacaacggcaaccaccactgccgcgtccaacgtcactccggacctcggctctcca
agcttccagcatagcatggatgactccctggacctcagcccgcaaggtcgtctgagtgat
gttttgaagaggaagcggctgccgaagcgaggaccacgccgccccaaatactctcccccc
agagacgacgataaagtggacaatcaggctaagagtccaaccactacagcgtcccctaaa
tcctccttcctggccagtctaaaccctaaaacctggggcaagctgggaacccagaccaac
agcgccaactccgagccatcccgcacggccggggtcagcggcctcgccagagccacgccc
aaagactctgtctctaataacagagataagattaaagcgtggattaaggagcaggccagt
aaatttgtagaacgatattttaactctgagaacgtggacggcagcaacccagcactcaac
gtcctgcagagactctgtactgctacagagcaactacatctgcaggttgaccggggtgtg
gagtgtctggtagagatctgcagtatcgtgtctgagtcggacgtgtcgtcgtttgagatc
cagcacagtggactagtgaagcagctgctgctctatctgacctcgaacagcgagagagac
acggtcagcagagaccagaggatcaagaggttcctgcacatcttctacggctgccctatg
ccggggcaggagacgttgttccgcttggagccgacagagaacggtccactgctggcactg
gtgcacaaaatgaacagctgtctgagtcagatggagcagtttcccgttaaagttcacgac
tttcccagtggcaacggaaacggcagcagaggttcacaagccctgaagttctttaacaca
caccagctgaagtgccagctgcagagacacccagactgcaccaacgtcaagcagtggaag
ggagggcctgttaaaatcgaccccctggcgttggtacaggccatcgagagatatcttgtt
gttagaggttacggcagaatcagagaagaggatgaagacagtgatgacgatggttcagat
gacgaaattgacgaatcattggctgctcagttcctgaactcaggcagcgttcggcaccgg
ctgcagttttacatcggagagcaactgctgccctacaacatgactgtctaccaggcagtg
agacagtttagccttcagccagaggaggagcgagagagcactgacgacgaggctaaccca
ctcggacgtgcaggaatatggaccaaaacgcacactatatggtataagccggtgagggag
gatgaggatggttgtaaagacgctgttggagggaaaaggggcagagctcagactgctccc
accaagacctccccacgcaatgcaaagaagcaggacgagttgtggcacgatggtgtatgt
ccaagcgtctcaaacccgttggaggcgtacctcatatctgatcctccagagggaatcact
tttgatgatccctccctggaggtcattctgctgctgagggttctgcactctattagcaga
tactggttctacctctatgaaaatgctgtgtgtaaggagatcatccccactagtgagttc
attaacagtaaactgacagcgaaggccaaccggcagctgcaggacccgctcgtcatcatg
acaggaaacatccccacctggctcaccgaactgggaaagacctgtccgttcttcttcccg
ttcgacacgcggcagatgctgttttacgtcactgcgtttgaccgggaccgagctatgcag
cggctgctggacaccaaccctgaaattaaccaatcagattcgcaggatagccgagtggcc
ccgcgacttgacaggaagaagaggacgataaaccgagaggagctgctgaagcaggcggag
tcagtgatgcaggacctgggcagctccagagccatgctggagattcagtacgaaaacgag
gtgggaacgggtctgggcccaacactggagttttatgctttggtgtctcaggagctgcag
agagctgatctgggtctgtggagaggagaagaggtcacacttgctaacccaaaagggagt
caggagggcacgaagtacatgtttagttccagagggctgttcgccgtgccgttcggccgc
agcaccaaacctgcacacatcgccaagatcaaaatgaagttccgcttccttgggaaactc
atggccaaagccatcatggacttcagactgctggacctgccgctgggcctgccattctat
aagtggatgttgaggcacgagtcgtccatcagctctttcgacctcgttaacatcgaccct
ggagtggccaaatctatccagcacctggaggacatcatcagacagaagaggagactggag
caggaccaatcacatacgagggagacgctgcagctcgctctggagagtctgaatatgaac
ggctgctcggtggaggatctgggactcgacttcacgctgcctggattcccaaacatcgag
ctgaagaagggcgggaaggacgttcctgtgaccatacacaacctggaggagtatttgagg
ttggtggtctactggactctaaatgagggagtttcacggcagtttgagtcgttcagggaa
ggatttgaatctgtctttcccctccaccatctgcagtacttctaccccgaggagcttgat
cagctgctgtgcggcagtaagtctgagacgtgggatgtgaaaactctgatggagtgctgc
agacccgaccatggatacacacacgacagccgggcagtgcggttcctctttgaggtccta
agcagttttgatgctgagcagcagagactcttcctccagtttgttactgggagccccaga
ctaccggtgggaggtttccggagtttgaaccctcccctgaccatcgtacgcaaaacgttc
gagtcgacggagaacccggacgactttctgccgtcggtgatgacgtgcgtgaactacctg
aagctgccggattactcgagcatcgagatcatgcgcgagaaactgttgatcgcagctcgc
gaaggacagcagtcctttcatctgtcctga
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integrated database retrieval system
