Astyanax mexicanus (Mexican tetra): 103027121
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Entry
103027121 CDS
T05042
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103027121 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103027121 (ss18)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103027121 (ss18)
GBAF(ncBAF) complex
103027121 (ss18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
103027121
NCBI-ProteinID:
XP_007254673
Ensembl:
ENSAMXG00000043355
UniProt:
A0A3B1JCE8
LinkDB
All DBs
Position
8
Genome browser
AA seq
371 aa
AA seq
DB search
MSVAFAPHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMSGGMNQSGPPPQPPHGHSMPSDGPPAPHMQNQMNG
QMPGPNHMPMQGPGPNQPPNMQSGSMNIPPSSHGSMGAYNHTVPASQGIPSQGQMNMSQG
QPMASYGPRPSMNMQPNQGPIMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMMGQGNHVMG
QRPMPPYRPPQQGPPQQYPGQEDYYGEQYSHGGQGAPEGNSQYGQQQEAYQQGPPQPQGY
PTQQQYPAQQGYPGQQQGYGPSQGAPGQYPNYPPGQGQQYAAYRPPQPGPPQGQPQRPYG
YDQGQYGNYQQ
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcgcctcacagacagcgcgctaaaggcgatattacacccgcagga
atacagaagcttctcgatgaaaacaatcagttgattcagtgcatcatggacttccagagc
aaaggcaaaactgcagaatgttcacattaccagcaaatgcttcacagaaatctggtgtac
ctggccacaatagcagactccaatcagaacatgcagtctcttctacctgctccacccacc
cagaacatgcccatgtcggggggaatgaatcagagcggcccccctccacagcccccccac
ggccacagcatgccgtcagacggcccccctgctccccacatgcagaaccagatgaacggc
cagatgcctggccccaaccacatgcccatgcagggccctggtcctaaccagccacccaac
atgcagagcggctccatgaacatacctcccagcagccatggctccatgggggcctacaat
cacaccgtacccgcttcacagggcatccccagccagggacagatgaacatgagccaggga
cagccaatggccagctatggtcccagacccagcatgaacatgcagcccaaccaaggtcct
ataatgcaccagcagcctccctctcagcagtataatatgcctcctggtggtggagggcaa
cattaccagggtcagcagaatccaatgggcatgatgggccagggtaaccatgtgatgggc
cagaggcccatgcctccatacaggccacctcagcaagggcctccacagcagtatccaggc
caggaggactactatggagaacagtacagtcatggaggtcagggagcacctgaaggaaac
tcccagtatggtcagcagcaggaagcctaccagcaaggtcctccccagccacagggctac
ccaacccagcaacagtacccagcacagcagggctacccgggccagcagcagggttacggg
ccctctcaaggtgctccaggacagtaccccaattacccaccaggccaagggcaacagtac
gcagcctacaggccgcctcagcctggacctccacaaggccaacctcagcgcccctacggc
tatgaccagggtcaatacggcaactaccagcagtaa
DBGET
integrated database retrieval system