KEGG   Astyanax mexicanus (Mexican tetra): 103027121
Entry
103027121         CDS       T05042                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103027121 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103027121 (ss18)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103027121 (ss18)
   GBAF(ncBAF) complex
    103027121 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 103027121
NCBI-ProteinID: XP_007254673
Ensembl: ENSAMXG00000043355
UniProt: A0A3B1JCE8
LinkDB
Position
8
AA seq 371 aa
MSVAFAPHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMSGGMNQSGPPPQPPHGHSMPSDGPPAPHMQNQMNG
QMPGPNHMPMQGPGPNQPPNMQSGSMNIPPSSHGSMGAYNHTVPASQGIPSQGQMNMSQG
QPMASYGPRPSMNMQPNQGPIMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMMGQGNHVMG
QRPMPPYRPPQQGPPQQYPGQEDYYGEQYSHGGQGAPEGNSQYGQQQEAYQQGPPQPQGY
PTQQQYPAQQGYPGQQQGYGPSQGAPGQYPNYPPGQGQQYAAYRPPQPGPPQGQPQRPYG
YDQGQYGNYQQ
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtcggtggcgtttgcgcctcacagacagcgcgctaaaggcgatattacacccgcagga
atacagaagcttctcgatgaaaacaatcagttgattcagtgcatcatggacttccagagc
aaaggcaaaactgcagaatgttcacattaccagcaaatgcttcacagaaatctggtgtac
ctggccacaatagcagactccaatcagaacatgcagtctcttctacctgctccacccacc
cagaacatgcccatgtcggggggaatgaatcagagcggcccccctccacagcccccccac
ggccacagcatgccgtcagacggcccccctgctccccacatgcagaaccagatgaacggc
cagatgcctggccccaaccacatgcccatgcagggccctggtcctaaccagccacccaac
atgcagagcggctccatgaacatacctcccagcagccatggctccatgggggcctacaat
cacaccgtacccgcttcacagggcatccccagccagggacagatgaacatgagccaggga
cagccaatggccagctatggtcccagacccagcatgaacatgcagcccaaccaaggtcct
ataatgcaccagcagcctccctctcagcagtataatatgcctcctggtggtggagggcaa
cattaccagggtcagcagaatccaatgggcatgatgggccagggtaaccatgtgatgggc
cagaggcccatgcctccatacaggccacctcagcaagggcctccacagcagtatccaggc
caggaggactactatggagaacagtacagtcatggaggtcagggagcacctgaaggaaac
tcccagtatggtcagcagcaggaagcctaccagcaaggtcctccccagccacagggctac
ccaacccagcaacagtacccagcacagcagggctacccgggccagcagcagggttacggg
ccctctcaaggtgctccaggacagtaccccaattacccaccaggccaagggcaacagtac
gcagcctacaggccgcctcagcctggacctccacaaggccaacctcagcgcccctacggc
tatgaccagggtcaatacggcaactaccagcagtaa

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