Astyanax mexicanus (Mexican tetra): 103027171
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Entry
103027171 CDS
T05042
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
103027171 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103027171 (srebf1)
04131 Membrane trafficking [BR:
amex04131
]
103027171 (srebf1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
103027171 (srebf1)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
103027171 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
103027171 (srebf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
ZapB
Motif
Other DBs
NCBI-GeneID:
103027171
NCBI-ProteinID:
XP_022529045
Ensembl:
ENSAMXG00000039368
LinkDB
All DBs
Position
19:31372683..31400829
Genome browser
AA seq
1166 aa
AA seq
DB search
MNNLSFDDPSLDNLDPSLSLNDPSDIDTALLSDIDDMLQLIHSQDMEFGGLFDHPPFPGP
LAPVQDLSALPPSSSPPSAPSSPPTTTTTTTSSILSSSPHLDALLGPPITRSSPAPFTPP
TFKQSPLAQVTPTPAAPRQQPTPLQTSQPKAQPAALHPSSQAAQAALTPSPAKSPVYSTT
QPAPQQQQPQPQPQQPQPQQQPPVVTFPNQNGYTVVPQQGSPQPVPSVPSSPQNIQPMTI
QAQVQNLSTSPILTATSSSPAQTISPHVQQVPVLLQPQFIKADSLLLTTLKPDASMVTTV
ASPCITSLATSTAPIQGTSLQALMSGGTILTTVPVMVDTEKLPINRIAISGKPGGQVHKG
EKRTAHNAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLRKAIDYIRYLQQSNQKLKQ
ENMALKMANQKNKSLKDLVAMEVDVKNELPTPPASDAGSPLPSGPFSHCSSDSEPDSPMV
DDSKPMTQAERSAGGMLDRSRMALCAFTLLFLSFNPLASLMWGSSSSNSRAGDTVGPSHV
GTGRNMLGMESAAESWGWMDWMLPTLLVWLLNGVLVVGVLIKLLVYGEPVTRPHSESSVL
FWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLACAVLWSTLRLWLQRLWV
GRWLACKAGGLRADRPLKDDARKSCRDAALVYHRLHQLHMTGKLGGSHLFAVHMALSAVN
LAECAGDCLSVATLAEIYVSAALRVKTSLPRLLHISSRGFLSRARQACLSPSGSVPPAMQ
WLCHPLGHRFFVDGDWSVRSSPKESIYSQAGNTVDPLAQVTQAFREHLLEKALYCVAQPH
GDKTPNLGQGEYSDALEYLQLLTSASDAAGATTQAFAIGSNMATVTGCDPHSKWWSSVAV
VIINWLQGDDVAAERLYPAVEHLPRSLQSAESPLPKACLNTFKAVRALLAKPENSQLSLS
YCEKASGLFRDSLNLGPHGRSSSTLDKLVQLLLCDLLLVTRTNVWRDQQVCSPATGQQSS
ASAASPAELQGFQQDLSSLRKLAHSFRPAMRRLFLHEATARLMAGASPTRTHQLLDRSLR
RRATPGGKSGEDLEECETRPGQREQAEAVMLACWYLPPSFLSAPGQRVGMLADAARTLEK
LGDKRTLHDCQQMIIKLGSGTTVTST
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgtcttttgacgatccgtcactggataacttggacccaagtttatcccta
aatgacccgagcgatatcgacaccgctctgctgagcgacattgacgatatgctccagctc
atccacagccaggacatggagttcggcggcctgttcgaccaccctccgttcccgggccct
ctggctccagtgcaggacctttcagccctgcctccatccagctcacctccctctgccccc
agctcaccccccactaccaccaccaccaccacctcctccatcctcagcagcagcccacat
ctggatgctctgctgggtcctcccatcacccgcagctccccagcccctttcaccccacct
actttcaagcagtcccccctggcccaggtgacccccacgcctgctgccccacgccagcag
cccaccccgctccagaccagccagcctaaagctcagcctgctgcccttcacccctccagc
caggctgcccaggctgcccttactccatcacctgccaagagcccagtctacagcaccacc
cagccggccccccagcaacagcagccacagccacagccacagcagccacagccacagcag
cagccgcctgttgttacattcccaaatcagaacggatacactgtggtccctcagcagggc
tccccccagcccgtccccagtgttcccagctctccacagaacatccaaccaatgaccatc
caggctcaggtccagaacctttccacatcacccatcctcaccgccacatccagctcccca
gcacagaccatttccccccacgttcagcaggttcctgtcttgctccaacctcagttcatc
aaggctgactctctcttactcacgactctgaagcctgatgcatcaatggtgaccacagtg
gcgtctccatgcatcacttccctggctacatccaccgctccgatccagggcacgtcccta
caggctctgatgagtggaggtaccatcctgaccacggttccagtcatggtggacacagag
aagctgcccatcaaccgtatagccatcagtggcaagccaggtggtcaggttcacaagggc
gagaagcgtacggctcacaacgccatcgagaagcgctatcgctcctccatcaacgacaag
attatcgaactcaaggatctggtggctggaacagaagctaagctgaataagtcagcagtt
ctgaggaaagccatcgactacattcgttacctgcaacagtccaaccaaaaactcaagcag
gagaacatggctctcaagatggccaatcagaagaacaagtctctgaaggacctggtggcg
atggaggtggatgtgaagaacgagctgcccactcccccagcctccgatgctggctccccc
ctgcccagcggccccttctctcactgcagcagcgactcagaaccagacagtcccatggta
gacgacagtaagccgatgactcaagctgaaaggtctgctggaggaatgctggaccgttct
cgcatggctttgtgtgccttcaccctcctcttcctctcatttaacccactggcttcactg
atgtgggggagcagtagcagcaacagcagagctggagatactgtcggccccagccatgtt
ggaactggcaggaacatgctgggaatggagagtgcagctgagtcatggggctggatggac
tggatgctgcccactctgttggtgtggttgctgaatggcgttctggtagttggagttctg
atcaagctgttggtttatggagaacctgtcactagacctcactctgaatcctccgtcctc
ttctggagacaccgcaaacaggccgacctggatctggcacggggagactttgcccaggcc
tctcagaacttgtggacctgcctgaaagctctcggccgacccctgcccacctctcagctg
gaccttgcctgcgctgtgctgtggtccaccctacgtctttggctacagaggctgtgggtg
ggtcgctggctggcctgtaaggctggaggccttcgcgctgatcgccccctgaaggatgat
gcgcgcaagagctgccgtgacgccgccctggtctaccaccgcctgcaccagctccacatg
acaggtaagctgggtggcagtcacctctttgctgtccacatggccctcagtgcggtgaac
ctggccgagtgtgctggcgactgtctgtctgtggccacgctggcggagatctacgtctcg
gctgctctgcgggtgaagaccagtctgcctcgtctgctgcacatcagctctcgtggcttt
ctgagtcgagctcgccaggcctgtctctcccccagtggcagtgttcctcctgccatgcag
tggctgtgtcaccctctgggtcatcgcttctttgtggatggtgattggtctgtgcgcagc
agccctaaggagagcatctacagccaggccgggaacacagtggaccctctggctcaggtg
acacaggccttcagggagcacctgctggagaaggccctgtactgtgtggcacagccccat
ggagacaagacacctaacctgggtcaaggagagtactccgatgccctagagtacctgcag
ctgctgaccagtgcctcggatgcagcgggagccaccacccaggctttcgccatcggctcc
aacatggctactgttactggctgtgaccctcactcgaaatggtggtcttcggttgcggtg
gtgatcattaactggctgcagggggatgacgtggcggcggaaagattgtatccggcagtg
gagcaccttccacgcagccttcagtccgcagagagccccttacccaaagcttgcctgaat
acatttaaagcagtgcgcgccctgctggccaaaccggagaacagccagctcagcctcagc
tactgtgagaaagccagcggcctgtttagagacagcctcaacctggggccacacggcagg
agcagcagcactttagataagttggtgcagttgttgctgtgtgatctgctgctggtaacg
cgcactaatgtgtggcgggatcagcaggtgtgttctccagccaccggtcagcagagctct
gcgtcggcggcctctccggcagagctgcagggcttccagcaggacctcagctctctgcgt
aaactcgcccacagcttcagacccgccatgcgcaggttgtttctgcatgaagctacagcc
aggctgatggcgggtgccagccccacgcgcacacaccagcttttggaccgcagtctacgc
cgtcgcgccacacccggaggcaagagcggtgaggacttagaagagtgtgagacgcggccg
ggtcagcgagagcaggctgaagcggtcatgctggcctgctggtacctccccccttccttt
ctttcggcacccggccaaagagtgggcatgttggcggatgcggctcgtacgctggagaag
ctgggggacaagcgcactctccacgactgccaacagatgatcatcaaactgggcagcgga
accacggtcacctccacataa
DBGET
integrated database retrieval system
