Astyanax mexicanus (Mexican tetra): 103027210
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Entry
103027210 CDS
T05042
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103027210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103027210
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103027210
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Gene cluster
GFIT
Motif
Pfam:
SNF
UPF0542
Motif
Other DBs
NCBI-GeneID:
103027210
NCBI-ProteinID:
XP_049339582
Ensembl:
ENSAMXG00000025910
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All DBs
Position
9:32760321..32777676
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AA seq
580 aa
AA seq
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MERKIEDRGHWASKTEFLLAVAGNVVGMGNVWRFPYLCYKNGGGVFLVPYVVFVVTCGIP
LFLLETAMGQYTQEGGITCWRRICPLAEGIGYAGQLIQLYGMCYMMILAWALFYLTFSFS
SELPWASCNNPWNTDDCNVAGRNLTLNGTQHSNSTSAATEFWEHRVLSISNGIEETGKVH
WEVLLCLTAVWIICYFCIWKGVKSTGKVVYFTATFPYVMLLVLLVRGLTLPGALEGVVFY
LYPDPEKLLDPQVWMEACAQVFFSYSTCVGMLTVLGSYNTYNNNCYRDCFMLCLLNSCTS
VVAGFAVFSVLGFMAHEHGKPIAEVAESGPGLAFIAYPQAVAMIPLPQLWAVCFFIMVIL
LCVDTQFTAIEGIVTSVTDVFPRVLRGARRREIFLLLFCIICYLTQIIMVTEGGMYWFQL
YDYYACSGACLLFLSIFQSLTIGWVFGANRLCNIIQDMTGSYPNVVFRLCWKYLTPLASL
VTFIYYLVELQPLTYNRGYVYPDWAYGFGRLMSLSSIVLVPAWALGRLGTTKGTLKQRWL
QLSSPDKNLPLTEKQRSMKQDVTSPVDIENLMNLKEEDLL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaaaatagaggacagggggcattgggccagtaaaactgagttcctgctggct
gtggctggaaatgtggttggaatgggcaatgtgtggaggttcccctacctctgctacaag
aatggaggaggggtgtttctggtgccctatgtggtgtttgtggtgacctgtggaataccc
ctgttccttctggagacggctatggggcaatacactcaagagggtggcatcacctgctgg
cgtcggatctgtccactggcagaaggtatcgggtatgcaggtcagctgattcagctctac
ggcatgtgctacatgatgatcctggcctgggctctgttctacctgaccttctccttcagc
tcagagctgccctgggcgagctgcaataacccctggaacacggatgactgcaatgttgct
ggaaggaacctgactctaaacgggacacagcattccaactcaacatctgctgccactgaa
ttctgggagcacagagtcctgtctatctctaatggtattgaagagacggggaaggtccac
tgggaggttctcctgtgtttaacagcagtgtggattatttgttatttttgcatctggaaa
ggagtcaagtccactggcaaggtggtgtatttcacagctacctttccctatgtgatgctg
ctggtgttgctggttcgagggctgactcttcctggagccttggagggagttgtgttctac
ctctatcctgatcctgagaaactgctggatccacaggtgtggatggaggcatgtgctcaa
gtcttcttctcttacagtacatgtgtgggaatgctgactgtgttgggaagctacaacacc
tacaataacaactgctacagggattgcttcatgctgtgtctgctgaacagctgtaccagt
gtggtggcagggtttgccgtgttctcggttttgggtttcatggctcatgaacatggcaaa
cctatagcagaggtggcagagtcaggacctggcctagcttttatagcttacccacaggca
gtggcgatgatacccctacctcagctgtgggcagtgtgcttctttattatggtcattctc
ttgtgcgtggacacacagtttactgcaatagaaggaattgttacttcagtaacggacgtg
tttcctcgagtgctccgtggggccagacgcagagagatcttccttctcctcttctgtatc
atctgctacctaacccaaatcatcatggtcacagagggagggatgtactggtttcagctg
tatgattactacgcctgtagtggagcctgccttctgttcctgtccatatttcagtcacta
accattggatgggtctttggggcaaaccgactgtgcaacatcattcaagatatgaccggg
tcataccccaatgtagtctttaggctgtgctggaagtatctcacccctcttgcgtccctg
gtcacattcatatattacctggtggagctgcagcccttaacgtacaaccgcgggtatgtg
tacccagactgggcgtatgggtttggtcggctgatgtctctgtcctccattgtgctggtg
cctgcctgggcactgggccgactggggacaacaaaagggaccctcaaacagcgctggctt
cagctgtccagtcccgacaaaaacctccccctgaccgaaaaacagcggagcatgaaacag
gacgtgacctcacccgtagacattgagaacttgatgaacttgaaggaggaggatttatta
taa
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