Astyanax mexicanus (Mexican tetra): 103027225
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Entry
103027225 CDS
T05042
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22 isoform X1
KO
K06467
CD22 antigen
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103027225 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amex04515
]
103027225 (si:dkey-24p1.1)
04090 CD molecules [BR:
amex04090
]
103027225 (si:dkey-24p1.1)
04091 Lectins [BR:
amex04091
]
103027225 (si:dkey-24p1.1)
Cell adhesion molecules [BR:
amex04515
]
Immunoglobulin superfamily
SIGLEC family
103027225 (si:dkey-24p1.1)
CD molecules [BR:
amex04090
]
Proteins
103027225 (si:dkey-24p1.1)
Lectins [BR:
amex04091
]
I-type lectins (Siglecs)
103027225 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
Ig_CD22
ig
V-set
Ig_4
C2-set_2
Ig_C17orf99
Ig_5
C2-set
V-set_CD47
ODV-E18
C2-set_3
DUF2291
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
103027225
NCBI-ProteinID:
XP_049323195
Ensembl:
ENSAMXG00000006763
LinkDB
All DBs
Position
18:25993584..26019155
Genome browser
AA seq
1024 aa
AA seq
DB search
MDAEWWLVFLLANLCLCSSQPTEKDPIYIKDTEMISTEEGSCVTIYCKYWKTNNLQLLWF
KDAVYDNKQKKYEGTIVYSNTEKRPQTSGQSYSHRVQYQSNANYQMASCTLRINDLEKAD
SGNYSFRTIGSYYRYMSKHVSLTVKDNPCKVHIEPEDKKMLTEGNNVSLRCSTSAQCSHH
PEWYKVISERVSEPMEVITNPETQDEGWKKITELKLSVTWEDNGRSFSCRPAGSKDDCQA
RNITLEVEYKPRDTEVQNSPETVKEGDTVTLSCSSKAHPNASFTWFKYNLLIQSGSSEYK
KYNINPADSGNYSCQAKNDLGTGVSLPVRINVLYAPKDVRIKAETSDVKIGDTLRLTCSE
QSSNPAPHVYSWYKDGVKLLETSSLLTITELKQSHSGWYHCEAENRIKSTASEKIQISVQ
YAPMNTNITGSSQIKLRSKFILTCSTDANPPAYHYSWYFKSEGTQQYFLLPQTTQSYQIE
EVIIEDSGSYICNSKNIIGAGPNSTEFKFNVLYPPSQPNLTMVETIRDGKKLSISCTVKS
YPAAEMTLSRITLQNPEDVLIIQDQTSTISFSGMVSEAHAGQYTCRAKNSEGQSDTTREL
KVLYAPKDVQVLDVIGQNWKEGNNLELICTAHSEPTVSTYTWEKSSGKEILSKSEKVGGT
QKLNIYNLTRADSGHYFCTAGNEIGYTRSASFEIRVKYGPNVTIIHNLTSLNDWDGKAPV
SLTCNVDCYPPVTNYQWFTNEENTILSYDQTYIVYPQNQGTYYCVAKNEVGESTSHPVKL
WFKGLFQQIFLWILISVFFLCILIVVILLVHRIVLTTESSDGTDSQSFFIPAIQARFLTG
SQNNTRENLVMEGEMEPYSHRHNQSSSTAHTYISANRQNHAGRSVPNIHTEYDAVKRPEA
IQKDPAMSTVNYANLQIKNHNNPSKSVNSSCEAGTVYAVVSKKKQNTKVVPEVNDDYENV
SSAHAPKTDFSNINWDSDTSEEEEKLNYSTVTFTATQQHKPRHTGEDSSSEEEERTQYSQ
VKIN
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaatggtggctggtttttctactcgccaacttgtgtttatgcagttcacag
ccaacagaaaaagatcccatatacataaaggacacagaaatgatttcaacagaggaggga
tcgtgtgtcaccatctactgcaaatactggaagactaataatttgcagctactctggttt
aaggacgctgtgtatgataataaacaaaaaaaatatgaggggaccattgtttatagtaac
acagaaaaacgcccacaaacttctgggcaaagctactcccacagagtgcaataccagagt
aatgccaattatcaaatggcatcatgcacattaagaattaatgacctggaaaaagctgac
agtggaaactacagctttaggactataggaagctattatagatatatgagtaaacatgtg
agcctcactgtaaaagacaacccttgcaaggtccatattgagccagaagataagaagatg
ctcacagaaggtaacaacgtgagtcttcggtgttcaacatcagcacagtgttcacatcat
cctgaatggtacaaagtaatctctgagagagtttctgagccgatggaagtcattacaaac
cctgaaactcaagatgaaggttggaaaaaaatcacagagctgaagttatcagtcacctgg
gaggataatgggagaagtttctcgtgccgtccagctggaagcaaagatgactgccaggcc
aggaatatcactctggaagttgaatacaaacctagagatactgaggtacagaacagccct
gagactgtgaaagaaggagataccgtcactctgtcctgctccagcaaagctcaccctaat
gcttccttcacctggtttaaatacaaccttttgattcaaagtggctcatctgagtacaaa
aagtataacataaatccagcagacagtggaaattacagctgtcaagccaaaaatgatctg
gggacaggcgtttcactcccagttaggatcaatgttttgtatgctccaaaagatgttcga
atcaaggccgaaaccagtgatgtcaaaataggggatacactccgtctgacgtgctccgag
caaagcagcaatcctgctccacatgtgtactcttggtataaagatggtgttaagttatta
gaaacaagttcattacttactattacagaactaaagcagagtcattctggatggtaccat
tgtgaggccgaaaatcgcataaagtctacagcctctgaaaagattcaaatatctgtacag
tatgctccaatgaacactaacattacaggctcgtcacaaataaagcttagatcaaaattt
atcctcacctgttcaaccgatgccaatcctcctgcttatcattattcctggtactttaag
tcagaaggcacccagcagtattttctccttcctcaaacgactcagtcatatcagattgag
gaggtgattattgaagattctggatcgtatatctgcaattctaagaatattattggtgca
ggaccaaactccacggaattcaaatttaatgtactctatccaccaagtcaacctaatctg
accatggtagagactataagagatggtaaaaagctttccatcagctgcactgtaaaaagc
tatcctgcagcagaaatgacactgagcagaatcactctccaaaacccagaagatgtgctg
ataatacaagaccagaccagcactatctctttctctggtatggtgtctgaagcacacgct
ggtcagtacacctgcagagccaaaaactcagagggacaatccgacacaacacgagagctg
aaggttttgtatgcccctaaagatgttcaagtattagatgttataggtcaaaactggaag
gaaggaaacaaccttgaactgatatgtacagcccattctgagcccactgtgtccacatac
acatgggagaaatcatctgggaaggagattctgagcaaatcagaaaaagtgggagggaca
cagaaactaaacatatataaccttacccgggctgactctgggcattatttctgcaccgcc
ggaaatgagattggctatacaagatctgcatccttcgagattagagttaaatatggccca
aacgtaacaattatccataacttgacctcattgaatgactgggatgggaaagctccagtc
agcctgacctgcaatgtagactgttatcctccagttacaaattatcaatggttcacaaat
gaggaaaatacaatcttgtcctatgatcagacctacattgtttacccacaaaaccaagga
acctactactgcgttgcaaaaaatgaagtaggggagtctacatctcacccagtcaaattg
tggtttaaaggactctttcaacagatttttctttggatcttgatctctgtatttttcctc
tgcatactgattgttgtcatattgctggtgcacaggattgtcttgacaacagaatcttca
gatggaacagacagccaatcatttttcatcccagctattcaagctcggtttttaacagga
tcccagaacaacactagagaaaatctggtgatggaaggagaaatggagccttacagtcac
agacacaaccagtcatcttccactgcacacacttatatctcagccaacagacagaaccat
gcaggaaggtcagttccaaacattcacactgagtatgatgctgtaaaaaggccagaagcc
attcagaaggatccagctatgtccactgtgaactatgctaatctgcagatcaagaaccac
aataatccaagtaaaagtgtaaacagcagctgtgaagctggaacagtgtatgctgtagtt
tccaaaaaaaagcagaatacaaaggtggtgccagaagttaatgacgattatgagaatgtg
tccagtgctcacgctccaaaaacagatttttccaacataaactgggactccgacaccagt
gaggaggaagagaaactaaactacagcacggtcactttcactgcaacacaacagcataaa
ccacgtcatactggagaagattccagttctgaagaggaagagaggactcagtattctcag
gtcaaaattaactga
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