Astyanax mexicanus (Mexican tetra): 103027270
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Entry
103027270 CDS
T05042
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103027270 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103027270 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103027270 (srsf2a)
Spliceosome [BR:
amex03041
]
Common components
Common spliceosomal components
SR proteins
103027270 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
103027270
NCBI-ProteinID:
XP_007241352
Ensembl:
ENSAMXG00000042718
UniProt:
A0A8T2LBA1
LinkDB
All DBs
Position
15:complement(45917143..45924917)
Genome browser
AA seq
218 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGGPPRRYGGYGRRSRSR
SPRRRRHSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSRSKSRTPRRSKSKSPSRSRSRSK
SKSHSRSRSPQSNRGSKSRSRSRSRAKSPEGTGTEQEP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggccggcctccgcccgatgtcgagggcatgacttcgctgaaggtggacaac
ctgacttaccgcacgtcccccgaaacgctgcgccgcgtgttcgagaagtacggccgcgtc
ggggacgtgtacatcccgcgggaccgctacacgaaggagagccgcggcttcgccttcgtg
cgcttccacgacaagcgcgacgccgaggacgcgatggacgccatggacggagccctgctg
gacgggcgggagctgcgggtgcaaatggcgcgctacggccgcccgccggactcccactac
ggccgccggggaggcccaccgcgcagatatggagggtacggaaggagaagtcgcagccgc
agtccccgccgcaggagacacagccgatccaggagccgaagccgctctcgctcccggagc
cgatcccgctacagcaggtccagatccaggtcttactcccggtcccgcagccgctccaag
agccggacaccacgcagaagcaagtccaaatccccgtccaggtcccgctctcgctccaag
tccaaatcccactccaggagtcgcagcccccagtcgaacagggggtctaaatccaggtcc
aggtccagaagtagggccaagtctcccgagggaactggaactgagcaagagccgtga
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integrated database retrieval system
